EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000024200 (Gene tree)
Gene ID: 690235
Gene Symbol: LOC690235
Alias: -
Full Name: similar to MAP/microtubule affinity-regulating kinase 4 (MAP/microtubule affinity-regulating kinase-like 1)
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 1885 bases
Position: chr8:16484535-16486419
Accession: 1582875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000031231	RIO1	PF01163.22	5.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000033223	-	1885	XM_001073773	ENSRNOP00000031231	502 (aa)	XP_001073773	D3ZBS8

Gene Model

Click here to download ENSRNOG00000024200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000024200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000024200	LOC690235	98	51.098	ENSRNOG00000030145	RGD1561667	97	51.098
ENSRNOG00000024200	LOC690235	51	32.197	ENSRNOG00000004362	Rps6ka5	65	32.197
ENSRNOG00000024200	LOC690235	51	31.769	ENSRNOG00000017332	Dapk2	75	31.769
ENSRNOG00000024200	LOC690235	97	43.408	ENSRNOG00000025799	RGD1560303	99	43.307
ENSRNOG00000024200	LOC690235	100	72.619	ENSRNOG00000052093	Smok2a	100	72.619
ENSRNOG00000024200	LOC690235	52	41.065	ENSRNOG00000051596	AABR07056131.1	95	41.065
ENSRNOG00000024200	LOC690235	100	73.016	ENSRNOG00000059551	RGD1560718	100	73.016
ENSRNOG00000024200	LOC690235	59	39.057	ENSRNOG00000028913	AABR07028872.1	93	39.057
ENSRNOG00000024200	LOC690235	52	41.445	ENSRNOG00000048230	AABR07056118.1	95	41.445

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000024200	LOC690235	55	41.577	ENSBTAG00000052622	-	88	41.577	Bos_taurus
ENSRNOG00000024200	LOC690235	65	39.571	ENSCPOG00000033321	-	53	39.571	Cavia_porcellus
ENSRNOG00000024200	LOC690235	63	39.688	ENSCPOG00000034310	-	97	39.688	Cavia_porcellus
ENSRNOG00000024200	LOC690235	57	41.924	ENSCING00000008201	-	88	41.924	Ciona_intestinalis
ENSRNOG00000024200	LOC690235	97	56.263	ENSCGRG00001007918	-	98	56.263	Cricetulus_griseus_chok1gshd
ENSRNOG00000024200	LOC690235	94	47.059	ENSCGRG00001006023	Gm4922	94	47.059	Cricetulus_griseus_chok1gshd
ENSRNOG00000024200	LOC690235	96	56.846	ENSCGRG00001010553	-	100	56.660	Cricetulus_griseus_chok1gshd
ENSRNOG00000024200	LOC690235	94	47.059	ENSCGRG00000009530	Gm4922	94	47.059	Cricetulus_griseus_crigri
ENSRNOG00000024200	LOC690235	96	35.642	ENSFDAG00000016208	-	98	35.845	Fukomys_damarensis
ENSRNOG00000024200	LOC690235	96	56.198	MGP_CAROLIEiJ_G0021079	-	99	56.198	Mus_caroli
ENSRNOG00000024200	LOC690235	98	42.915	MGP_CAROLIEiJ_G0015144	Gm4922	98	42.915	Mus_caroli
ENSRNOG00000024200	LOC690235	96	56.198	MGP_CAROLIEiJ_G0021082	-	99	56.198	Mus_caroli
ENSRNOG00000024200	LOC690235	96	56.198	MGP_CAROLIEiJ_G0021080	-	99	56.198	Mus_caroli
ENSRNOG00000024200	LOC690235	96	56.198	MGP_CAROLIEiJ_G0021081	-	99	56.198	Mus_caroli
ENSRNOG00000024200	LOC690235	96	50.617	ENSMUSG00000101307	Gm7358	95	50.206	Mus_musculus
ENSRNOG00000024200	LOC690235	57	41.319	ENSMUSG00000095976	Gm5891	92	41.319	Mus_musculus
ENSRNOG00000024200	LOC690235	57	41.667	ENSMUSG00000109516	Gm6882	92	41.667	Mus_musculus
ENSRNOG00000024200	LOC690235	56	42.553	ENSMUSG00000096283	Gm6176	93	42.553	Mus_musculus
ENSRNOG00000024200	LOC690235	100	54.455	ENSMUSG00000075598	Smok3c	100	54.455	Mus_musculus
ENSRNOG00000024200	LOC690235	100	54.455	ENSMUSG00000075599	Smok3a	100	54.455	Mus_musculus
ENSRNOG00000024200	LOC690235	56	42.908	ENSMUSG00000095363	Gm4567	93	42.908	Mus_musculus
ENSRNOG00000024200	LOC690235	96	49.076	ENSMUSG00000067941	Gm7168	95	48.665	Mus_musculus
ENSRNOG00000024200	LOC690235	96	55.579	ENSMUSG00000073457	Smok2b	99	55.579	Mus_musculus
ENSRNOG00000024200	LOC690235	100	55.227	ENSMUSG00000073458	Smok2a	100	55.227	Mus_musculus
ENSRNOG00000024200	LOC690235	96	50.412	ENSMUSG00000101361	Gm7356	95	50.000	Mus_musculus
ENSRNOG00000024200	LOC690235	56	42.908	ENSMUSG00000109396	Gm4565	93	42.908	Mus_musculus
ENSRNOG00000024200	LOC690235	100	42.248	ENSMUSG00000044624	Gm4922	100	42.248	Mus_musculus
ENSRNOG00000024200	LOC690235	56	42.908	ENSMUSG00000095190	Gm10668	93	42.908	Mus_musculus
ENSRNOG00000024200	LOC690235	100	54.455	ENSMUSG00000079156	Smok3b	100	54.455	Mus_musculus
ENSRNOG00000024200	LOC690235	57	41.319	ENSMUSG00000095683	Gm10662	92	41.319	Mus_musculus
ENSRNOG00000024200	LOC690235	56	42.199	ENSMUSG00000101436	Gm5157	93	42.199	Mus_musculus
ENSRNOG00000024200	LOC690235	56	42.908	ENSMUSG00000094682	Gm6902	93	42.908	Mus_musculus
ENSRNOG00000024200	LOC690235	56	42.908	ENSMUSG00000109060	Gm4513	93	42.908	Mus_musculus
ENSRNOG00000024200	LOC690235	96	42.455	MGP_PahariEiJ_G0023763	Gm4922	100	42.471	Mus_pahari
ENSRNOG00000024200	LOC690235	100	42.688	MGP_SPRETEiJ_G0015952	Gm4922	100	42.688	Mus_spretus
ENSRNOG00000024200	LOC690235	100	48.515	ENSNGAG00000008026	-	100	48.515	Nannospalax_galili
ENSRNOG00000024200	LOC690235	50	42.231	ENSOGAG00000033945	-	94	42.248	Otolemur_garnettii
ENSRNOG00000024200	LOC690235	96	52.893	ENSPEMG00000022024	-	98	56.477	Peromyscus_maniculatus_bairdii

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006468	protein phosphorylation	21873635.	IBA	Process
GO:0035556	intracellular signal transduction	21873635.	IBA	Process