EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000024212 (Gene tree)
Gene ID: 307745
Gene Symbol: Tent4b
Alias: LOC307745|Papd5
Full Name: terminal nucleotidyltransferase 4B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 61136 bases
Position: chr19:19771677-19832812
Accession: 1309587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000062854	PAP_assoc	PF03828.19	6e-15	1	1
ENSRNOP00000072094	PAP_assoc	PF03828.19	1.3e-14	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000067582	-	3978	-	ENSRNOP00000062854	421 (aa)	-	D3ZBG8
ENSRNOT00000084657	-	2022	XM_006255261	ENSRNOP00000072094	607 (aa)	XP_006255323	A0A0G2K239

Gene Model

Click here to download ENSRNOG00000024212's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000024212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000024212	Tent4b	76	50.258	ENSRNOG00000017613	Tent4a	58	74.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000024212	Tent4b	100	89.686	ENSG00000121274	TENT4B	94	97.902	Homo_sapiens
ENSRNOG00000024212	Tent4b	100	53.600	ENSAPOG00000022376	tent4b	57	82.527	Acanthochromis_polyacanthus
ENSRNOG00000024212	Tent4b	100	82.004	ENSAMEG00000006535	TENT4B	88	87.270	Ailuropoda_melanoleuca
ENSRNOG00000024212	Tent4b	98	55.901	ENSACIG00000004518	tent4b	93	56.454	Amphilophus_citrinellus
ENSRNOG00000024212	Tent4b	100	53.082	ENSAOCG00000018117	tent4b	70	68.263	Amphiprion_ocellaris
ENSRNOG00000024212	Tent4b	100	53.187	ENSAPEG00000010518	tent4b	70	68.263	Amphiprion_percula
ENSRNOG00000024212	Tent4b	100	53.226	ENSATEG00000003179	tent4b	71	66.600	Anabas_testudineus
ENSRNOG00000024212	Tent4b	100	72.245	ENSAPLG00000014941	TENT4B	91	79.476	Anas_platyrhynchos
ENSRNOG00000024212	Tent4b	100	68.367	ENSACAG00000013952	TENT4B	91	63.706	Anolis_carolinensis
ENSRNOG00000024212	Tent4b	100	89.686	ENSANAG00000029197	TENT4B	93	84.459	Aotus_nancymaae
ENSRNOG00000024212	Tent4b	100	53.200	ENSACLG00000017633	tent4b	54	79.032	Astatotilapia_calliptera
ENSRNOG00000024212	Tent4b	100	55.285	ENSAMXG00000018932	tent4b	72	67.118	Astyanax_mexicanus
ENSRNOG00000024212	Tent4b	100	80.931	ENSBTAG00000007942	TENT4B	100	84.685	Bos_taurus
ENSRNOG00000024212	Tent4b	100	89.462	ENSCJAG00000001932	TENT4B	91	90.232	Callithrix_jacchus
ENSRNOG00000024212	Tent4b	100	89.238	ENSCAFG00000009938	TENT4B	93	93.031	Canis_familiaris
ENSRNOG00000024212	Tent4b	100	89.238	ENSCAFG00020000987	TENT4B	94	83.437	Canis_lupus_dingo
ENSRNOG00000024212	Tent4b	100	90.600	ENSCHIG00000021933	TENT4B	100	90.600	Capra_hircus
ENSRNOG00000024212	Tent4b	78	92.049	ENSTSYG00000009001	-	99	92.049	Carlito_syrichta
ENSRNOG00000024212	Tent4b	100	89.462	ENSCPOG00000011799	TENT4B	94	84.953	Cavia_porcellus
ENSRNOG00000024212	Tent4b	100	88.864	ENSCCAG00000035345	TENT4B	93	84.343	Cebus_capucinus
ENSRNOG00000024212	Tent4b	100	89.087	ENSCATG00000031641	TENT4B	89	90.115	Cercocebus_atys
ENSRNOG00000024212	Tent4b	100	89.686	ENSCLAG00000004921	TENT4B	93	87.687	Chinchilla_lanigera
ENSRNOG00000024212	Tent4b	100	76.268	ENSCSAG00000005390	TENT4B	93	79.496	Chlorocebus_sabaeus
ENSRNOG00000024212	Tent4b	84	96.667	ENSCHOG00000002006	-	71	96.667	Choloepus_hoffmanni
ENSRNOG00000024212	Tent4b	100	70.612	ENSCPBG00000015960	TENT4B	90	66.199	Chrysemys_picta_bellii
ENSRNOG00000024212	Tent4b	100	89.686	ENSCANG00000041185	TENT4B	93	88.023	Colobus_angolensis_palliatus
ENSRNOG00000024212	Tent4b	100	90.583	ENSCGRG00001023597	Tent4b	93	89.661	Cricetulus_griseus_chok1gshd
ENSRNOG00000024212	Tent4b	100	53.213	ENSCSEG00000011367	tent4b	70	68.008	Cynoglossus_semilaevis
ENSRNOG00000024212	Tent4b	99	55.099	ENSCVAG00000020733	tent4b	72	63.636	Cyprinodon_variegatus
ENSRNOG00000024212	Tent4b	100	52.929	ENSDARG00000060071	tent4b	73	66.275	Danio_rerio
ENSRNOG00000024212	Tent4b	100	80.573	ENSDNOG00000001039	TENT4B	100	80.573	Dasypus_novemcinctus
ENSRNOG00000024212	Tent4b	100	82.004	ENSDORG00000000031	Tent4b	90	82.004	Dipodomys_ordii
ENSRNOG00000024212	Tent4b	76	69.062	ENSETEG00000012522	-	55	94.595	Echinops_telfairi
ENSRNOG00000024212	Tent4b	63	67.454	ENSEBUG00000011220	tent4b	55	73.700	Eptatretus_burgeri
ENSRNOG00000024212	Tent4b	100	89.462	ENSEASG00005014551	TENT4B	93	85.345	Equus_asinus_asinus
ENSRNOG00000024212	Tent4b	100	85.327	ENSECAG00000040529	TENT4B	76	85.852	Equus_caballus
ENSRNOG00000024212	Tent4b	91	92.593	ENSEEUG00000005687	-	82	92.593	Erinaceus_europaeus
ENSRNOG00000024212	Tent4b	83	63.188	ENSELUG00000017815	TENT4B	53	77.151	Esox_lucius
ENSRNOG00000024212	Tent4b	100	59.152	ENSELUG00000006619	tent4b	90	55.326	Esox_lucius
ENSRNOG00000024212	Tent4b	100	89.686	ENSFCAG00000018796	TENT4B	97	84.384	Felis_catus
ENSRNOG00000024212	Tent4b	100	72.301	ENSFALG00000000087	TENT4B	91	78.959	Ficedula_albicollis
ENSRNOG00000024212	Tent4b	100	81.391	ENSFDAG00000013258	TENT4B	92	87.261	Fukomys_damarensis
ENSRNOG00000024212	Tent4b	97	56.347	ENSFHEG00000012383	tent4b	73	63.158	Fundulus_heteroclitus
ENSRNOG00000024212	Tent4b	63	77.403	ENSGMOG00000006223	tent4b	71	77.143	Gadus_morhua
ENSRNOG00000024212	Tent4b	100	72.449	ENSGALG00000031851	TENT4B	91	68.827	Gallus_gallus
ENSRNOG00000024212	Tent4b	100	50.909	ENSGAFG00000009790	tent4b	72	64.786	Gambusia_affinis
ENSRNOG00000024212	Tent4b	100	50.800	ENSGACG00000016727	tent4b	66	79.630	Gasterosteus_aculeatus
ENSRNOG00000024212	Tent4b	100	70.408	ENSGAGG00000003561	TENT4B	90	66.096	Gopherus_agassizii
ENSRNOG00000024212	Tent4b	100	89.462	ENSGGOG00000006316	PAPD5	97	83.358	Gorilla_gorilla
ENSRNOG00000024212	Tent4b	100	53.200	ENSHBUG00000021610	tent4b	54	79.032	Haplochromis_burtoni
ENSRNOG00000024212	Tent4b	100	89.462	ENSHGLG00000004206	TENT4B	94	84.375	Heterocephalus_glaber_female
ENSRNOG00000024212	Tent4b	100	89.462	ENSHGLG00100014639	TENT4B	87	88.168	Heterocephalus_glaber_male
ENSRNOG00000024212	Tent4b	100	52.695	ENSHCOG00000001028	tent4b	69	67.814	Hippocampus_comes
ENSRNOG00000024212	Tent4b	100	54.545	ENSIPUG00000015994	tent4b	73	65.478	Ictalurus_punctatus
ENSRNOG00000024212	Tent4b	100	89.686	ENSJJAG00000015670	Tent4b	93	86.847	Jaculus_jaculus
ENSRNOG00000024212	Tent4b	100	52.515	ENSKMAG00000001070	tent4b	56	79.843	Kryptolebias_marmoratus
ENSRNOG00000024212	Tent4b	100	52.579	ENSLBEG00000023462	tent4b	70	66.402	Labrus_bergylta
ENSRNOG00000024212	Tent4b	100	64.213	ENSLACG00000009825	TENT4B	92	65.854	Latimeria_chalumnae
ENSRNOG00000024212	Tent4b	99	59.220	ENSLOCG00000007410	tent4b	71	71.120	Lepisosteus_oculatus
ENSRNOG00000024212	Tent4b	100	81.391	ENSLAFG00000006069	-	98	81.391	Loxodonta_africana
ENSRNOG00000024212	Tent4b	100	88.864	ENSMFAG00000002315	TENT4B	93	86.464	Macaca_fascicularis
ENSRNOG00000024212	Tent4b	100	89.462	ENSMMUG00000003116	TENT4B	99	92.966	Macaca_mulatta
ENSRNOG00000024212	Tent4b	100	89.087	ENSMNEG00000036382	TENT4B	93	86.633	Macaca_nemestrina
ENSRNOG00000024212	Tent4b	100	89.462	ENSMLEG00000034283	TENT4B	93	87.571	Mandrillus_leucophaeus
ENSRNOG00000024212	Tent4b	87	62.477	ENSMAMG00000004618	tent4b	74	65.759	Mastacembelus_armatus
ENSRNOG00000024212	Tent4b	100	53.200	ENSMZEG00005006186	tent4b	54	79.032	Maylandia_zebra
ENSRNOG00000024212	Tent4b	100	72.449	ENSMGAG00000004957	TENT4B	91	79.694	Meleagris_gallopavo
ENSRNOG00000024212	Tent4b	100	90.135	ENSMAUG00000018042	Tent4b	94	89.114	Mesocricetus_auratus
ENSRNOG00000024212	Tent4b	100	89.013	ENSMICG00000027866	TENT4B	94	82.791	Microcebus_murinus
ENSRNOG00000024212	Tent4b	100	90.583	ENSMOCG00000013042	Tent4b	94	88.958	Microtus_ochrogaster
ENSRNOG00000024212	Tent4b	100	50.905	ENSMMOG00000016359	tent4b	72	66.800	Mola_mola
ENSRNOG00000024212	Tent4b	90	78.700	ENSMODG00000013026	TENT4B	100	78.418	Monodelphis_domestica
ENSRNOG00000024212	Tent4b	81	67.391	ENSMALG00000013905	tent4b	72	66.468	Monopterus_albus
ENSRNOG00000024212	Tent4b	97	90.909	MGP_CAROLIEiJ_G0031355	Tent4b	91	90.909	Mus_caroli
ENSRNOG00000024212	Tent4b	100	91.256	ENSMUSG00000036779	Tent4b	94	90.909	Mus_musculus
ENSRNOG00000024212	Tent4b	100	91.480	MGP_PahariEiJ_G0022954	Tent4b	94	90.581	Mus_pahari
ENSRNOG00000024212	Tent4b	97	90.909	MGP_SPRETEiJ_G0032473	Tent4b	91	90.909	Mus_spretus
ENSRNOG00000024212	Tent4b	100	81.595	ENSMPUG00000003121	TENT4B	86	87.476	Mustela_putorius_furo
ENSRNOG00000024212	Tent4b	93	76.498	ENSMLUG00000013865	TENT4B	89	81.446	Myotis_lucifugus
ENSRNOG00000024212	Tent4b	81	64.143	ENSNBRG00000008931	tent4b	55	77.807	Neolamprologus_brichardi
ENSRNOG00000024212	Tent4b	100	89.686	ENSNLEG00000000797	TENT4B	94	83.461	Nomascus_leucogenys
ENSRNOG00000024212	Tent4b	100	78.528	ENSOPRG00000013849	TENT4B	92	86.026	Ochotona_princeps
ENSRNOG00000024212	Tent4b	100	89.238	ENSODEG00000002528	TENT4B	93	86.972	Octodon_degus
ENSRNOG00000024212	Tent4b	100	52.811	ENSONIG00000002860	tent4b	61	79.032	Oreochromis_niloticus
ENSRNOG00000024212	Tent4b	90	74.215	ENSOANG00000000589	TENT4B	100	80.525	Ornithorhynchus_anatinus
ENSRNOG00000024212	Tent4b	91	79.249	ENSOCUG00000014750	TENT4B	97	86.334	Oryctolagus_cuniculus
ENSRNOG00000024212	Tent4b	100	51.004	ENSORLG00000013989	tent4b	71	65.217	Oryzias_latipes
ENSRNOG00000024212	Tent4b	96	55.710	ENSORLG00020020171	tent4b	76	65.226	Oryzias_latipes_hni
ENSRNOG00000024212	Tent4b	100	51.406	ENSORLG00015018544	tent4b	71	65.941	Oryzias_latipes_hsok
ENSRNOG00000024212	Tent4b	96	56.636	ENSOMEG00000016359	tent4b	71	66.468	Oryzias_melastigma
ENSRNOG00000024212	Tent4b	100	81.504	ENSOGAG00000011282	TENT4B	93	86.667	Otolemur_garnettii
ENSRNOG00000024212	Tent4b	100	80.573	ENSOARG00000017186	TENT4B	98	80.573	Ovis_aries
ENSRNOG00000024212	Tent4b	100	89.686	ENSPPAG00000033650	TENT4B	89	87.856	Pan_paniscus
ENSRNOG00000024212	Tent4b	100	89.686	ENSPPRG00000024986	TENT4B	88	87.352	Panthera_pardus
ENSRNOG00000024212	Tent4b	78	93.272	ENSPTIG00000020374	-	99	93.272	Panthera_tigris_altaica
ENSRNOG00000024212	Tent4b	100	90.090	ENSPTRG00000008101	TENT4B	93	83.108	Pan_troglodytes
ENSRNOG00000024212	Tent4b	100	89.686	ENSPANG00000006934	TENT4B	85	86.267	Papio_anubis
ENSRNOG00000024212	Tent4b	100	56.855	ENSPKIG00000000206	TENT4B	90	58.706	Paramormyrops_kingsleyae
ENSRNOG00000024212	Tent4b	83	61.657	ENSPKIG00000005085	tent4b	68	79.077	Paramormyrops_kingsleyae
ENSRNOG00000024212	Tent4b	100	70.816	ENSPSIG00000010667	TENT4B	92	78.139	Pelodiscus_sinensis
ENSRNOG00000024212	Tent4b	83	66.667	ENSPMGG00000007216	tent4b	69	65.686	Periophthalmus_magnuspinnatus
ENSRNOG00000024212	Tent4b	100	78.732	ENSPCIG00000018132	TENT4B	92	72.286	Phascolarctos_cinereus
ENSRNOG00000024212	Tent4b	100	56.512	ENSPFOG00000015267	tent4b	72	64.981	Poecilia_formosa
ENSRNOG00000024212	Tent4b	100	51.004	ENSPLAG00000011816	tent4b	72	64.786	Poecilia_latipinna
ENSRNOG00000024212	Tent4b	100	51.313	ENSPMEG00000012621	tent4b	72	64.786	Poecilia_mexicana
ENSRNOG00000024212	Tent4b	97	57.407	ENSPREG00000007243	tent4b	72	64.981	Poecilia_reticulata
ENSRNOG00000024212	Tent4b	100	81.800	ENSPPYG00000007337	-	92	86.237	Pongo_abelii
ENSRNOG00000024212	Tent4b	86	76.923	ENSPCAG00000003515	TENT4B	77	100.000	Procavia_capensis
ENSRNOG00000024212	Tent4b	97	91.667	ENSPCOG00000015505	TENT4B	74	94.629	Propithecus_coquereli
ENSRNOG00000024212	Tent4b	86	73.318	ENSPVAG00000004167	TENT4B	71	79.864	Pteropus_vampyrus
ENSRNOG00000024212	Tent4b	100	53.200	ENSPNYG00000010512	tent4b	54	79.032	Pundamilia_nyererei
ENSRNOG00000024212	Tent4b	100	55.354	ENSPNAG00000023275	tent4b	73	67.829	Pygocentrus_nattereri
ENSRNOG00000024212	Tent4b	100	89.686	ENSRBIG00000042876	TENT4B	93	86.464	Rhinopithecus_bieti
ENSRNOG00000024212	Tent4b	100	89.686	ENSRROG00000042164	TENT4B	93	86.464	Rhinopithecus_roxellana
ENSRNOG00000024212	Tent4b	100	89.462	ENSSBOG00000020525	TENT4B	93	86.294	Saimiri_boliviensis_boliviensis
ENSRNOG00000024212	Tent4b	100	78.528	ENSSHAG00000018746	TENT4B	93	78.415	Sarcophilus_harrisii
ENSRNOG00000024212	Tent4b	100	56.582	ENSSFOG00015019677	TENT4B	63	80.412	Scleropages_formosus
ENSRNOG00000024212	Tent4b	78	71.671	ENSSFOG00015001704	tent4b	66	71.671	Scleropages_formosus
ENSRNOG00000024212	Tent4b	100	53.770	ENSSMAG00000009474	tent4b	70	68.317	Scophthalmus_maximus
ENSRNOG00000024212	Tent4b	100	53.213	ENSSDUG00000006848	tent4b	70	66.994	Seriola_dumerili
ENSRNOG00000024212	Tent4b	100	53.213	ENSSLDG00000017282	tent4b	70	67.191	Seriola_lalandi_dorsalis
ENSRNOG00000024212	Tent4b	91	91.975	ENSSARG00000002791	-	76	98.969	Sorex_araneus
ENSRNOG00000024212	Tent4b	100	69.574	ENSSPUG00000010353	TENT4B	81	75.000	Sphenodon_punctatus
ENSRNOG00000024212	Tent4b	100	51.779	ENSSPAG00000020283	tent4b	70	67.735	Stegastes_partitus
ENSRNOG00000024212	Tent4b	97	84.526	ENSSSCG00000040887	TENT4B	91	84.568	Sus_scrofa
ENSRNOG00000024212	Tent4b	100	72.449	ENSTGUG00000008561	TENT4B	91	79.476	Taeniopygia_guttata
ENSRNOG00000024212	Tent4b	97	57.829	ENSTRUG00000006962	tent4b	73	65.891	Takifugu_rubripes
ENSRNOG00000024212	Tent4b	73	70.748	ENSTNIG00000004479	tent4b	90	76.425	Tetraodon_nigroviridis
ENSRNOG00000024212	Tent4b	100	81.557	ENSTBEG00000012515	TENT4B	93	79.153	Tupaia_belangeri
ENSRNOG00000024212	Tent4b	86	80.278	ENSTTRG00000013375	TENT4B	100	87.002	Tursiops_truncatus
ENSRNOG00000024212	Tent4b	100	89.462	ENSUAMG00000024757	TENT4B	94	85.110	Ursus_americanus
ENSRNOG00000024212	Tent4b	100	81.595	ENSUMAG00000006309	TENT4B	89	81.595	Ursus_maritimus
ENSRNOG00000024212	Tent4b	100	80.573	ENSVPAG00000002204	TENT4B	98	80.573	Vicugna_pacos
ENSRNOG00000024212	Tent4b	100	89.238	ENSVVUG00000018169	TENT4B	81	100.000	Vulpes_vulpes
ENSRNOG00000024212	Tent4b	100	58.502	ENSXETG00000000446	tent4b	90	67.767	Xenopus_tropicalis
ENSRNOG00000024212	Tent4b	97	56.878	ENSXCOG00000012709	tent4b	73	64.217	Xiphophorus_couchianus
ENSRNOG00000024212	Tent4b	97	57.407	ENSXMAG00000023205	tent4b	72	64.981	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004652	polynucleotide adenylyltransferase activity	21873635.	IBA	Function
GO:0004652	polynucleotide adenylyltransferase activity	-	ISO	Function
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006378	mRNA polyadenylation	-	IEA	Process
GO:0006378	mRNA polyadenylation	-	ISO	Process
GO:0010587	miRNA catabolic process	-	IEA	Process
GO:0010587	miRNA catabolic process	-	ISO	Process
GO:0031499	TRAMP complex	21873635.	IBA	Component
GO:0031499	TRAMP complex	-	ISO	Component
GO:0032211	negative regulation of telomere maintenance via telomerase	-	IEA	Process
GO:0032211	negative regulation of telomere maintenance via telomerase	-	ISO	Process
GO:0033500	carbohydrate homeostasis	-	IEA	Process
GO:0033500	carbohydrate homeostasis	-	ISO	Process
GO:0043629	ncRNA polyadenylation	-	ISO	Process
GO:0043630	ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process	-	IEA	Process
GO:0043630	ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process	-	ISO	Process
GO:0060212	negative regulation of nuclear-transcribed mRNA poly(A) tail shortening	-	IEA	Process
GO:0060212	negative regulation of nuclear-transcribed mRNA poly(A) tail shortening	-	ISO	Process
GO:0070568	guanylyltransferase activity	-	IEA	Function
GO:0070568	guanylyltransferase activity	-	ISO	Function
GO:0071044	histone mRNA catabolic process	21873635.	IBA	Process
GO:0071044	histone mRNA catabolic process	-	ISO	Process
GO:0071050	snoRNA polyadenylation	21873635.	IBA	Process
GO:0071050	snoRNA polyadenylation	-	ISO	Process
GO:0071076	RNA 3' uridylation	-	IEA	Process
GO:0071076	RNA 3' uridylation	-	ISO	Process
GO:1905870	positive regulation of 3'-UTR-mediated mRNA stabilization	-	IEA	Process
GO:1905870	positive regulation of 3'-UTR-mediated mRNA stabilization	-	ISO	Process