EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000024352 (Gene tree)
Gene ID: 304423
Gene Symbol: Tyw1
Alias: LOC304423|RGD1310420|Rsafd1
Full Name: tRNA-yW synthesizing protein 1 homolog
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 94340 bases
Position: chr12:29824981-29919320
Accession: 1310420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000038092	Wyosine_form	PF08608.12	1.6e-26	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000038092	-	2706	-	ENSRNOP00000038092	724 (aa)	-	B5DF48

Gene Model

Click here to download ENSRNOG00000024352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000024352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000024352	Tyw1	100	81.557	ENSG00000198874	TYW1	100	81.557	Homo_sapiens
ENSRNOG00000024352	Tyw1	100	72.490	ENSG00000277149	TYW1B	100	72.490	Homo_sapiens
ENSRNOG00000024352	Tyw1	99	66.621	ENSAPOG00000014391	tyw1	97	66.621	Acanthochromis_polyacanthus
ENSRNOG00000024352	Tyw1	98	65.223	ENSACIG00000007325	tyw1	99	64.615	Amphilophus_citrinellus
ENSRNOG00000024352	Tyw1	99	65.569	ENSAOCG00000016792	tyw1	97	65.034	Amphiprion_ocellaris
ENSRNOG00000024352	Tyw1	99	65.706	ENSAPEG00000015939	tyw1	99	67.265	Amphiprion_percula
ENSRNOG00000024352	Tyw1	90	66.058	ENSATEG00000006856	tyw1	91	65.906	Anabas_testudineus
ENSRNOG00000024352	Tyw1	100	79.508	ENSANAG00000037051	-	100	79.508	Aotus_nancymaae
ENSRNOG00000024352	Tyw1	98	66.205	ENSACLG00000018688	tyw1	96	66.022	Astatotilapia_calliptera
ENSRNOG00000024352	Tyw1	98	66.944	ENSAMXG00000004157	tyw1	99	66.346	Astyanax_mexicanus
ENSRNOG00000024352	Tyw1	100	79.343	ENSBTAG00000008446	TYW1	100	79.343	Bos_taurus
ENSRNOG00000024352	Tyw1	100	79.235	ENSCJAG00000004295	-	100	79.235	Callithrix_jacchus
ENSRNOG00000024352	Tyw1	100	78.338	ENSCAFG00000010867	-	100	77.959	Canis_familiaris
ENSRNOG00000024352	Tyw1	100	70.386	ENSCAFG00020005367	-	99	72.701	Canis_lupus_dingo
ENSRNOG00000024352	Tyw1	100	80.301	ENSCHIG00000019510	-	100	80.301	Capra_hircus
ENSRNOG00000024352	Tyw1	90	80.945	ENSTSYG00000008236	-	99	80.945	Carlito_syrichta
ENSRNOG00000024352	Tyw1	87	74.057	ENSCAPG00000013569	-	100	74.057	Cavia_aperea
ENSRNOG00000024352	Tyw1	100	76.344	ENSCPOG00000011182	-	100	76.725	Cavia_porcellus
ENSRNOG00000024352	Tyw1	100	79.918	ENSCCAG00000026643	-	100	80.055	Cebus_capucinus
ENSRNOG00000024352	Tyw1	100	81.557	ENSCATG00000043677	-	100	81.557	Cercocebus_atys
ENSRNOG00000024352	Tyw1	100	77.582	ENSCLAG00000006321	-	100	77.582	Chinchilla_lanigera
ENSRNOG00000024352	Tyw1	100	69.918	ENSCSAG00000018274	-	100	69.918	Chlorocebus_sabaeus
ENSRNOG00000024352	Tyw1	68	90.171	ENSCHOG00000003801	-	85	90.171	Choloepus_hoffmanni
ENSRNOG00000024352	Tyw1	100	70.828	ENSCPBG00000014896	-	97	70.828	Chrysemys_picta_bellii
ENSRNOG00000024352	Tyw1	81	58.744	ENSCING00000004125	-	97	59.423	Ciona_intestinalis
ENSRNOG00000024352	Tyw1	88	54.421	ENSCSAVG00000005712	-	100	55.725	Ciona_savignyi
ENSRNOG00000024352	Tyw1	100	81.557	ENSCANG00000033209	-	100	81.557	Colobus_angolensis_palliatus
ENSRNOG00000024352	Tyw1	71	93.750	ENSCGRG00001003679	Tyw1	88	93.750	Cricetulus_griseus_chok1gshd
ENSRNOG00000024352	Tyw1	98	67.181	ENSCSEG00000005810	tyw1	94	67.181	Cynoglossus_semilaevis
ENSRNOG00000024352	Tyw1	88	64.923	ENSCVAG00000001054	tyw1	91	65.145	Cyprinodon_variegatus
ENSRNOG00000024352	Tyw1	99	67.995	ENSDARG00000062987	tyw1	96	67.215	Danio_rerio
ENSRNOG00000024352	Tyw1	100	80.685	ENSDNOG00000024165	-	100	80.137	Dasypus_novemcinctus
ENSRNOG00000024352	Tyw1	100	67.080	ENSDORG00000014772	Tyw1	99	67.493	Dipodomys_ordii
ENSRNOG00000024352	Tyw1	60	72.685	ENSEBUG00000004494	tyw1	91	72.685	Eptatretus_burgeri
ENSRNOG00000024352	Tyw1	100	80.164	ENSEASG00005008818	-	100	80.164	Equus_asinus_asinus
ENSRNOG00000024352	Tyw1	100	73.324	ENSECAG00000023164	-	100	73.324	Equus_caballus
ENSRNOG00000024352	Tyw1	61	93.750	ENSEEUG00000005950	-	61	93.750	Erinaceus_europaeus
ENSRNOG00000024352	Tyw1	99	65.522	ENSELUG00000008449	tyw1	98	66.466	Esox_lucius
ENSRNOG00000024352	Tyw1	100	77.793	ENSFCAG00000014262	-	100	77.007	Felis_catus
ENSRNOG00000024352	Tyw1	99	66.211	ENSFALG00000013810	-	100	65.984	Ficedula_albicollis
ENSRNOG00000024352	Tyw1	99	77.565	ENSFDAG00000013270	-	99	77.565	Fukomys_damarensis
ENSRNOG00000024352	Tyw1	84	66.989	ENSFHEG00000020824	tyw1	81	67.045	Fundulus_heteroclitus
ENSRNOG00000024352	Tyw1	99	68.707	ENSGALG00000001110	-	99	68.980	Gallus_gallus
ENSRNOG00000024352	Tyw1	98	65.750	ENSGACG00000012692	tyw1	98	65.475	Gasterosteus_aculeatus
ENSRNOG00000024352	Tyw1	100	70.149	ENSGAGG00000022393	-	100	70.149	Gopherus_agassizii
ENSRNOG00000024352	Tyw1	90	72.838	ENSGGOG00000001473	TYW1	100	72.838	Gorilla_gorilla
ENSRNOG00000024352	Tyw1	98	66.345	ENSHBUG00000002640	tyw1	96	65.884	Haplochromis_burtoni
ENSRNOG00000024352	Tyw1	88	76.406	ENSHGLG00000012093	-	100	76.406	Heterocephalus_glaber_female
ENSRNOG00000024352	Tyw1	100	78.796	ENSHGLG00100011743	TYW1	100	78.796	Heterocephalus_glaber_male
ENSRNOG00000024352	Tyw1	98	62.465	ENSHCOG00000019949	tyw1	96	61.613	Hippocampus_comes
ENSRNOG00000024352	Tyw1	99	66.253	ENSIPUG00000016330	tyw1	97	65.840	Ictalurus_punctatus
ENSRNOG00000024352	Tyw1	100	78.386	ENSSTOG00000004067	-	92	79.480	Ictidomys_tridecemlineatus
ENSRNOG00000024352	Tyw1	100	82.118	ENSJJAG00000022959	Tyw1	100	83.081	Jaculus_jaculus
ENSRNOG00000024352	Tyw1	98	66.158	ENSKMAG00000018599	tyw1	96	66.390	Kryptolebias_marmoratus
ENSRNOG00000024352	Tyw1	99	65.527	ENSLACG00000018917	tyw1	96	65.800	Latimeria_chalumnae
ENSRNOG00000024352	Tyw1	99	68.407	ENSLOCG00000004035	tyw1	96	67.030	Lepisosteus_oculatus
ENSRNOG00000024352	Tyw1	100	81.557	ENSMFAG00000035457	-	100	81.557	Macaca_fascicularis
ENSRNOG00000024352	Tyw1	100	81.557	ENSMMUG00000030374	-	100	81.557	Macaca_mulatta
ENSRNOG00000024352	Tyw1	100	81.831	ENSMNEG00000041992	-	100	81.831	Macaca_nemestrina
ENSRNOG00000024352	Tyw1	100	81.557	ENSMLEG00000039741	-	100	81.557	Mandrillus_leucophaeus
ENSRNOG00000024352	Tyw1	98	67.177	ENSMAMG00000016089	tyw1	94	66.759	Mastacembelus_armatus
ENSRNOG00000024352	Tyw1	91	70.376	ENSMZEG00005024386	tyw1	97	69.925	Maylandia_zebra
ENSRNOG00000024352	Tyw1	99	68.392	ENSMGAG00000002176	-	99	68.392	Meleagris_gallopavo
ENSRNOG00000024352	Tyw1	100	91.713	ENSMAUG00000002959	Tyw1	100	91.713	Mesocricetus_auratus
ENSRNOG00000024352	Tyw1	99	80.992	ENSMICG00000014374	-	100	80.992	Microcebus_murinus
ENSRNOG00000024352	Tyw1	100	89.517	ENSMOCG00000017720	Tyw1	100	89.241	Microtus_ochrogaster
ENSRNOG00000024352	Tyw1	98	61.831	ENSMMOG00000005064	tyw1	97	62.006	Mola_mola
ENSRNOG00000024352	Tyw1	100	69.878	ENSMODG00000025697	-	100	70.201	Monodelphis_domestica
ENSRNOG00000024352	Tyw1	98	67.129	ENSMALG00000010238	tyw1	96	67.129	Monopterus_albus
ENSRNOG00000024352	Tyw1	99	93.620	MGP_CAROLIEiJ_G0027801	Tyw1	99	93.620	Mus_caroli
ENSRNOG00000024352	Tyw1	99	93.620	ENSMUSG00000056310	Tyw1	99	93.620	Mus_musculus
ENSRNOG00000024352	Tyw1	99	91.540	MGP_PahariEiJ_G0024383	Tyw1	99	90.707	Mus_pahari
ENSRNOG00000024352	Tyw1	99	93.481	MGP_SPRETEiJ_G0028799	Tyw1	99	93.481	Mus_spretus
ENSRNOG00000024352	Tyw1	95	77.536	ENSMPUG00000016191	-	100	76.556	Mustela_putorius_furo
ENSRNOG00000024352	Tyw1	100	76.087	ENSMLUG00000013582	-	100	76.087	Myotis_lucifugus
ENSRNOG00000024352	Tyw1	99	82.410	ENSNGAG00000002742	Tyw1	99	81.579	Nannospalax_galili
ENSRNOG00000024352	Tyw1	96	65.805	ENSNBRG00000016996	tyw1	99	65.330	Neolamprologus_brichardi
ENSRNOG00000024352	Tyw1	100	79.918	ENSNLEG00000013210	-	99	79.918	Nomascus_leucogenys
ENSRNOG00000024352	Tyw1	92	62.819	ENSOPRG00000008734	-	88	62.819	Ochotona_princeps
ENSRNOG00000024352	Tyw1	99	71.310	ENSODEG00000014729	-	99	71.862	Octodon_degus
ENSRNOG00000024352	Tyw1	98	67.039	ENSONIG00000005872	tyw1	96	67.129	Oreochromis_niloticus
ENSRNOG00000024352	Tyw1	100	78.933	ENSOCUG00000003173	-	100	78.933	Oryctolagus_cuniculus
ENSRNOG00000024352	Tyw1	98	66.252	ENSORLG00000001393	tyw1	98	63.961	Oryzias_latipes
ENSRNOG00000024352	Tyw1	98	66.390	ENSORLG00020019361	tyw1	98	63.984	Oryzias_latipes_hni
ENSRNOG00000024352	Tyw1	98	66.713	ENSORLG00015008095	tyw1	95	65.786	Oryzias_latipes_hsok
ENSRNOG00000024352	Tyw1	99	79.339	ENSOGAG00000016555	-	99	79.339	Otolemur_garnettii
ENSRNOG00000024352	Tyw1	100	79.348	ENSOARG00000010673	-	100	79.348	Ovis_aries
ENSRNOG00000024352	Tyw1	100	78.326	ENSPPRG00000004945	-	100	77.534	Panthera_pardus
ENSRNOG00000024352	Tyw1	100	78.464	ENSPTIG00000019545	-	100	77.671	Panthera_tigris_altaica
ENSRNOG00000024352	Tyw1	100	75.848	ENSPTRG00000023076	TYW1B	99	75.848	Pan_troglodytes
ENSRNOG00000024352	Tyw1	100	81.284	ENSPANG00000019053	-	100	81.284	Papio_anubis
ENSRNOG00000024352	Tyw1	99	66.759	ENSPKIG00000006545	tyw1	96	67.586	Paramormyrops_kingsleyae
ENSRNOG00000024352	Tyw1	96	65.957	ENSPMGG00000004240	tyw1	100	65.070	Periophthalmus_magnuspinnatus
ENSRNOG00000024352	Tyw1	99	90.443	ENSPEMG00000008274	Tyw1	99	90.443	Peromyscus_maniculatus_bairdii
ENSRNOG00000024352	Tyw1	99	67.341	ENSPFOG00000015855	tyw1	99	67.341	Poecilia_formosa
ENSRNOG00000024352	Tyw1	99	65.722	ENSPLAG00000000838	tyw1	97	65.992	Poecilia_latipinna
ENSRNOG00000024352	Tyw1	99	65.900	ENSPMEG00000019437	tyw1	100	65.126	Poecilia_mexicana
ENSRNOG00000024352	Tyw1	99	64.481	ENSPREG00000018773	tyw1	98	64.754	Poecilia_reticulata
ENSRNOG00000024352	Tyw1	100	81.967	ENSPPYG00000017514	TYW1	100	81.967	Pongo_abelii
ENSRNOG00000024352	Tyw1	100	63.711	ENSPCOG00000015294	-	97	70.504	Propithecus_coquereli
ENSRNOG00000024352	Tyw1	98	66.205	ENSPNYG00000022381	tyw1	96	66.022	Pundamilia_nyererei
ENSRNOG00000024352	Tyw1	98	68.516	ENSPNAG00000009001	tyw1	98	68.239	Pygocentrus_nattereri
ENSRNOG00000024352	Tyw1	100	81.284	ENSRBIG00000039619	-	100	81.284	Rhinopithecus_bieti
ENSRNOG00000024352	Tyw1	100	81.421	ENSRROG00000039780	-	100	81.421	Rhinopithecus_roxellana
ENSRNOG00000024352	Tyw1	94	40.462	YPL207W	-	68	55.102	Saccharomyces_cerevisiae
ENSRNOG00000024352	Tyw1	100	78.825	ENSSBOG00000025873	-	100	78.825	Saimiri_boliviensis_boliviensis
ENSRNOG00000024352	Tyw1	100	70.941	ENSSHAG00000010346	-	100	72.161	Sarcophilus_harrisii
ENSRNOG00000024352	Tyw1	99	68.377	ENSSFOG00015001054	tyw1	99	68.722	Scleropages_formosus
ENSRNOG00000024352	Tyw1	98	66.297	ENSSMAG00000020514	tyw1	96	66.019	Scophthalmus_maximus
ENSRNOG00000024352	Tyw1	98	66.391	ENSSDUG00000001552	tyw1	94	70.060	Seriola_dumerili
ENSRNOG00000024352	Tyw1	98	66.529	ENSSLDG00000003554	tyw1	96	65.981	Seriola_lalandi_dorsalis
ENSRNOG00000024352	Tyw1	99	68.767	ENSSPUG00000002715	-	99	69.589	Sphenodon_punctatus
ENSRNOG00000024352	Tyw1	99	79.670	ENSSSCG00000007733	-	99	79.670	Sus_scrofa
ENSRNOG00000024352	Tyw1	90	68.278	ENSTGUG00000003428	-	99	68.278	Taeniopygia_guttata
ENSRNOG00000024352	Tyw1	98	66.388	ENSTRUG00000016107	tyw1	93	66.388	Takifugu_rubripes
ENSRNOG00000024352	Tyw1	90	69.910	ENSTNIG00000018999	tyw1	100	69.760	Tetraodon_nigroviridis
ENSRNOG00000024352	Tyw1	100	78.747	ENSUMAG00000015343	-	100	77.959	Ursus_maritimus
ENSRNOG00000024352	Tyw1	100	77.929	ENSVVUG00000016457	-	100	77.551	Vulpes_vulpes
ENSRNOG00000024352	Tyw1	99	69.577	ENSXETG00000010094	tyw1	99	69.577	Xenopus_tropicalis
ENSRNOG00000024352	Tyw1	99	66.758	ENSXMAG00000013125	tyw1	99	67.523	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003824	catalytic activity	-	IEA	Function
GO:0008033	tRNA processing	-	IEA	Process
GO:0010181	FMN binding	-	IEA	Function
GO:0016021	integral component of membrane	-	IEA	Component
GO:0051539	4 iron, 4 sulfur cluster binding	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process