EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000024525 (Gene tree)
Gene ID: 366783
Gene Symbol: Alkbh8
Alias: LOC366783|RGD1304687
Full Name: alkB homolog 8%2C tRNA methyltransferase
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 71487 bases
Position: chr6:18877907-18949393
Accession: 1304687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000003432	RRM_1	PF00076.22	9e-08	1	1
ENSRNOP00000072411	RRM_1	PF00076.22	9e-08	1	1
ENSRNOP00000003432	2OG-FeII_Oxy_2	PF13532.6	8.9e-23	1	1
ENSRNOP00000072411	2OG-FeII_Oxy_2	PF13532.6	8.9e-23	1	1
ENSRNOP00000003432	Methyltransf_8	PF05148.15	2e-05	1	1
ENSRNOP00000072411	Methyltransf_8	PF05148.15	2e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000003432	-	2467	-	ENSRNOP00000003432	664 (aa)	-	D3ZK29
ENSRNOT00000084222	-	2312	XM_006239749	ENSRNOP00000072411	664 (aa)	XP_006239811	D3ZK29

Gene Model

Click here to download ENSRNOG00000024525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000024525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000024525	Alkbh8	100	76.807	ENSG00000137760	ALKBH8	100	76.807	Homo_sapiens
ENSRNOG00000024525	Alkbh8	99	48.591	ENSAPOG00000000864	alkbh8	99	48.591	Acanthochromis_polyacanthus
ENSRNOG00000024525	Alkbh8	100	74.699	ENSAMEG00000002177	ALKBH8	99	74.699	Ailuropoda_melanoleuca
ENSRNOG00000024525	Alkbh8	97	52.640	ENSACIG00000003562	alkbh8	99	51.656	Amphilophus_citrinellus
ENSRNOG00000024525	Alkbh8	98	64.444	ENSAOCG00000017691	alkbh8	99	47.767	Amphiprion_ocellaris
ENSRNOG00000024525	Alkbh8	98	64.444	ENSAPEG00000016243	alkbh8	95	51.657	Amphiprion_percula
ENSRNOG00000024525	Alkbh8	99	52.194	ENSATEG00000008092	alkbh8	98	52.648	Anabas_testudineus
ENSRNOG00000024525	Alkbh8	99	64.881	ENSAPLG00000015851	ALKBH8	99	64.881	Anas_platyrhynchos
ENSRNOG00000024525	Alkbh8	100	76.657	ENSANAG00000027895	ALKBH8	100	76.657	Aotus_nancymaae
ENSRNOG00000024525	Alkbh8	99	48.440	ENSACLG00000022770	alkbh8	99	48.440	Astatotilapia_calliptera
ENSRNOG00000024525	Alkbh8	99	54.255	ENSAMXG00000036006	alkbh8	98	54.255	Astyanax_mexicanus
ENSRNOG00000024525	Alkbh8	100	76.506	ENSBTAG00000010642	ALKBH8	100	76.506	Bos_taurus
ENSRNOG00000024525	Alkbh8	98	33.792	WBGene00007581	alkb-8	97	33.792	Caenorhabditis_elegans
ENSRNOG00000024525	Alkbh8	100	68.976	ENSCJAG00000009957	ALKBH8	100	68.976	Callithrix_jacchus
ENSRNOG00000024525	Alkbh8	100	74.548	ENSCAFG00000014696	ALKBH8	98	74.548	Canis_familiaris
ENSRNOG00000024525	Alkbh8	100	74.398	ENSCAFG00020008876	ALKBH8	98	74.398	Canis_lupus_dingo
ENSRNOG00000024525	Alkbh8	100	77.259	ENSCHIG00000008649	ALKBH8	100	77.259	Capra_hircus
ENSRNOG00000024525	Alkbh8	100	76.506	ENSTSYG00000007339	ALKBH8	100	76.506	Carlito_syrichta
ENSRNOG00000024525	Alkbh8	72	79.498	ENSCAPG00000006447	ALKBH8	99	79.498	Cavia_aperea
ENSRNOG00000024525	Alkbh8	100	76.807	ENSCCAG00000036485	ALKBH8	100	76.807	Cebus_capucinus
ENSRNOG00000024525	Alkbh8	100	74.398	ENSCATG00000035864	ALKBH8	100	74.398	Cercocebus_atys
ENSRNOG00000024525	Alkbh8	100	77.259	ENSCSAG00000003027	ALKBH8	100	77.259	Chlorocebus_sabaeus
ENSRNOG00000024525	Alkbh8	80	63.790	ENSCHOG00000011491	ALKBH8	99	63.790	Choloepus_hoffmanni
ENSRNOG00000024525	Alkbh8	99	64.732	ENSCPBG00000018611	ALKBH8	95	64.732	Chrysemys_picta_bellii
ENSRNOG00000024525	Alkbh8	96	37.674	ENSCING00000009639	-	100	37.092	Ciona_intestinalis
ENSRNOG00000024525	Alkbh8	99	36.826	ENSCSAVG00000000631	-	99	36.826	Ciona_savignyi
ENSRNOG00000024525	Alkbh8	100	76.958	ENSCANG00000030900	ALKBH8	100	76.958	Colobus_angolensis_palliatus
ENSRNOG00000024525	Alkbh8	100	86.145	ENSCGRG00001011248	Alkbh8	100	86.145	Cricetulus_griseus_chok1gshd
ENSRNOG00000024525	Alkbh8	99	48.459	ENSCSEG00000018513	alkbh8	98	49.306	Cynoglossus_semilaevis
ENSRNOG00000024525	Alkbh8	98	51.367	ENSCVAG00000006951	alkbh8	98	51.799	Cyprinodon_variegatus
ENSRNOG00000024525	Alkbh8	99	55.105	ENSDARG00000060256	alkbh8	97	55.105	Danio_rerio
ENSRNOG00000024525	Alkbh8	100	69.774	ENSDNOG00000035970	ALKBH8	99	69.774	Dasypus_novemcinctus
ENSRNOG00000024525	Alkbh8	99	74.962	ENSDORG00000008596	Alkbh8	97	74.962	Dipodomys_ordii
ENSRNOG00000024525	Alkbh8	98	40.841	FBgn0034748	CG17807	97	41.150	Drosophila_melanogaster
ENSRNOG00000024525	Alkbh8	99	45.714	ENSEBUG00000004016	alkbh8	97	45.714	Eptatretus_burgeri
ENSRNOG00000024525	Alkbh8	100	77.259	ENSEASG00005011010	ALKBH8	98	77.259	Equus_asinus_asinus
ENSRNOG00000024525	Alkbh8	100	77.560	ENSECAG00000019425	ALKBH8	100	77.560	Equus_caballus
ENSRNOG00000024525	Alkbh8	70	61.588	ENSEEUG00000015594	-	100	61.588	Erinaceus_europaeus
ENSRNOG00000024525	Alkbh8	87	53.675	ENSELUG00000012168	alkbh8	86	54.017	Esox_lucius
ENSRNOG00000024525	Alkbh8	94	74.718	ENSFCAG00000033583	ALKBH8	99	74.718	Felis_catus
ENSRNOG00000024525	Alkbh8	99	64.275	ENSFALG00000000478	ALKBH8	99	64.275	Ficedula_albicollis
ENSRNOG00000024525	Alkbh8	100	74.548	ENSFDAG00000010504	ALKBH8	100	74.548	Fukomys_damarensis
ENSRNOG00000024525	Alkbh8	99	49.148	ENSFHEG00000003699	alkbh8	99	49.288	Fundulus_heteroclitus
ENSRNOG00000024525	Alkbh8	99	51.424	ENSGMOG00000002720	alkbh8	98	51.424	Gadus_morhua
ENSRNOG00000024525	Alkbh8	99	63.731	ENSGALG00000017170	ALKBH8	99	63.731	Gallus_gallus
ENSRNOG00000024525	Alkbh8	99	52.540	ENSGAFG00000009655	alkbh8	99	52.685	Gambusia_affinis
ENSRNOG00000024525	Alkbh8	99	50.744	ENSGACG00000008185	alkbh8	99	51.190	Gasterosteus_aculeatus
ENSRNOG00000024525	Alkbh8	99	64.732	ENSGAGG00000024945	ALKBH8	99	64.732	Gopherus_agassizii
ENSRNOG00000024525	Alkbh8	100	77.259	ENSGGOG00000015505	ALKBH8	100	77.259	Gorilla_gorilla
ENSRNOG00000024525	Alkbh8	99	48.575	ENSHBUG00000011914	alkbh8	99	48.575	Haplochromis_burtoni
ENSRNOG00000024525	Alkbh8	99	52.148	ENSHCOG00000015443	alkbh8	99	52.148	Hippocampus_comes
ENSRNOG00000024525	Alkbh8	99	54.079	ENSIPUG00000009495	alkbh8	98	54.079	Ictalurus_punctatus
ENSRNOG00000024525	Alkbh8	100	79.367	ENSSTOG00000024939	ALKBH8	100	79.367	Ictidomys_tridecemlineatus
ENSRNOG00000024525	Alkbh8	99	77.307	ENSJJAG00000021066	Alkbh8	99	77.307	Jaculus_jaculus
ENSRNOG00000024525	Alkbh8	98	51.297	ENSKMAG00000008461	alkbh8	98	51.729	Kryptolebias_marmoratus
ENSRNOG00000024525	Alkbh8	99	49.298	ENSLBEG00000019152	alkbh8	99	49.649	Labrus_bergylta
ENSRNOG00000024525	Alkbh8	99	61.053	ENSLACG00000008785	ALKBH8	99	61.053	Latimeria_chalumnae
ENSRNOG00000024525	Alkbh8	97	58.346	ENSLOCG00000006833	alkbh8	94	58.673	Lepisosteus_oculatus
ENSRNOG00000024525	Alkbh8	100	71.084	ENSLAFG00000017895	ALKBH8	100	71.084	Loxodonta_africana
ENSRNOG00000024525	Alkbh8	100	77.560	ENSMFAG00000003178	ALKBH8	100	77.560	Macaca_fascicularis
ENSRNOG00000024525	Alkbh8	89	77.253	ENSMMUG00000005437	ALKBH8	100	77.253	Macaca_mulatta
ENSRNOG00000024525	Alkbh8	100	77.711	ENSMNEG00000041672	ALKBH8	99	78.984	Macaca_nemestrina
ENSRNOG00000024525	Alkbh8	100	77.259	ENSMLEG00000029986	ALKBH8	100	77.259	Mandrillus_leucophaeus
ENSRNOG00000024525	Alkbh8	99	47.290	ENSMAMG00000007121	alkbh8	99	47.425	Mastacembelus_armatus
ENSRNOG00000024525	Alkbh8	99	48.304	ENSMZEG00005014129	alkbh8	99	48.304	Maylandia_zebra
ENSRNOG00000024525	Alkbh8	99	64.382	ENSMGAG00000015156	ALKBH8	99	64.382	Meleagris_gallopavo
ENSRNOG00000024525	Alkbh8	81	73.967	ENSMAUG00000022157	Alkbh8	88	73.967	Mesocricetus_auratus
ENSRNOG00000024525	Alkbh8	100	76.807	ENSMICG00000001044	ALKBH8	100	76.807	Microcebus_murinus
ENSRNOG00000024525	Alkbh8	100	84.187	ENSMOCG00000019349	Alkbh8	100	84.187	Microtus_ochrogaster
ENSRNOG00000024525	Alkbh8	98	51.054	ENSMMOG00000011386	alkbh8	99	51.054	Mola_mola
ENSRNOG00000024525	Alkbh8	99	66.617	ENSMODG00000014721	ALKBH8	99	66.617	Monodelphis_domestica
ENSRNOG00000024525	Alkbh8	99	48.128	ENSMALG00000020225	alkbh8	99	48.396	Monopterus_albus
ENSRNOG00000024525	Alkbh8	100	92.319	ENSMUSG00000025899	Alkbh8	100	94.975	Mus_musculus
ENSRNOG00000024525	Alkbh8	98	91.859	MGP_PahariEiJ_G0014615	Alkbh8	100	91.859	Mus_pahari
ENSRNOG00000024525	Alkbh8	98	92.166	MGP_SPRETEiJ_G0032856	Alkbh8	100	92.166	Mus_spretus
ENSRNOG00000024525	Alkbh8	100	72.754	ENSMPUG00000006077	ALKBH8	100	72.754	Mustela_putorius_furo
ENSRNOG00000024525	Alkbh8	61	73.710	ENSMLUG00000016822	ALKBH8	100	73.710	Myotis_lucifugus
ENSRNOG00000024525	Alkbh8	100	79.790	ENSNGAG00000017423	Alkbh8	100	80.090	Nannospalax_galili
ENSRNOG00000024525	Alkbh8	97	52.535	ENSNBRG00000014084	alkbh8	99	52.027	Neolamprologus_brichardi
ENSRNOG00000024525	Alkbh8	100	77.259	ENSNLEG00000007217	ALKBH8	100	77.259	Nomascus_leucogenys
ENSRNOG00000024525	Alkbh8	87	73.069	ENSMEUG00000015254	ALKBH8	88	73.069	Notamacropus_eugenii
ENSRNOG00000024525	Alkbh8	87	68.438	ENSOPRG00000009592	ALKBH8	87	68.438	Ochotona_princeps
ENSRNOG00000024525	Alkbh8	100	75.753	ENSODEG00000011567	ALKBH8	100	75.753	Octodon_degus
ENSRNOG00000024525	Alkbh8	99	52.671	ENSONIG00000005062	alkbh8	99	52.671	Oreochromis_niloticus
ENSRNOG00000024525	Alkbh8	100	65.569	ENSOANG00000010463	ALKBH8	99	65.569	Ornithorhynchus_anatinus
ENSRNOG00000024525	Alkbh8	100	76.355	ENSOCUG00000011931	ALKBH8	99	76.355	Oryctolagus_cuniculus
ENSRNOG00000024525	Alkbh8	98	53.577	ENSORLG00000010440	alkbh8	98	53.729	Oryzias_latipes
ENSRNOG00000024525	Alkbh8	98	51.371	ENSORLG00020015934	alkbh8	98	51.804	Oryzias_latipes_hni
ENSRNOG00000024525	Alkbh8	98	50.796	ENSORLG00015023296	alkbh8	99	50.000	Oryzias_latipes_hsok
ENSRNOG00000024525	Alkbh8	98	51.809	ENSOMEG00000002376	alkbh8	98	52.533	Oryzias_melastigma
ENSRNOG00000024525	Alkbh8	100	73.193	ENSOGAG00000004956	ALKBH8	100	73.193	Otolemur_garnettii
ENSRNOG00000024525	Alkbh8	100	76.807	ENSOARG00000010464	ALKBH8	100	76.807	Ovis_aries
ENSRNOG00000024525	Alkbh8	100	76.958	ENSPPAG00000012183	ALKBH8	100	76.958	Pan_paniscus
ENSRNOG00000024525	Alkbh8	100	75.000	ENSPPRG00000017697	ALKBH8	100	75.000	Panthera_pardus
ENSRNOG00000024525	Alkbh8	100	74.849	ENSPTIG00000011062	ALKBH8	100	74.849	Panthera_tigris_altaica
ENSRNOG00000024525	Alkbh8	100	77.108	ENSPTRG00000004240	ALKBH8	100	77.108	Pan_troglodytes
ENSRNOG00000024525	Alkbh8	100	76.958	ENSPANG00000010011	ALKBH8	100	76.958	Papio_anubis
ENSRNOG00000024525	Alkbh8	99	53.323	ENSPKIG00000023662	alkbh8	99	52.525	Paramormyrops_kingsleyae
ENSRNOG00000024525	Alkbh8	78	69.790	ENSPSIG00000011627	ALKBH8	82	69.790	Pelodiscus_sinensis
ENSRNOG00000024525	Alkbh8	98	53.354	ENSPMGG00000011981	alkbh8	99	53.354	Periophthalmus_magnuspinnatus
ENSRNOG00000024525	Alkbh8	100	85.607	ENSPEMG00000022020	Alkbh8	100	85.607	Peromyscus_maniculatus_bairdii
ENSRNOG00000024525	Alkbh8	99	48.645	ENSPMAG00000004616	alkbh8	98	48.795	Petromyzon_marinus
ENSRNOG00000024525	Alkbh8	99	51.820	ENSPFOG00000001533	alkbh8	99	52.111	Poecilia_formosa
ENSRNOG00000024525	Alkbh8	99	51.520	ENSPLAG00000008535	alkbh8	99	51.809	Poecilia_latipinna
ENSRNOG00000024525	Alkbh8	99	51.520	ENSPMEG00000016977	alkbh8	99	51.809	Poecilia_mexicana
ENSRNOG00000024525	Alkbh8	87	50.980	ENSPREG00000020964	alkbh8	99	51.307	Poecilia_reticulata
ENSRNOG00000024525	Alkbh8	100	77.259	ENSPPYG00000003834	ALKBH8	100	77.259	Pongo_abelii
ENSRNOG00000024525	Alkbh8	100	63.705	ENSPCAG00000005589	ALKBH8	100	63.705	Procavia_capensis
ENSRNOG00000024525	Alkbh8	100	70.526	ENSPCOG00000022645	ALKBH8	100	70.526	Propithecus_coquereli
ENSRNOG00000024525	Alkbh8	100	72.139	ENSPVAG00000011970	ALKBH8	100	72.139	Pteropus_vampyrus
ENSRNOG00000024525	Alkbh8	99	52.719	ENSPNYG00000015082	alkbh8	99	52.719	Pundamilia_nyererei
ENSRNOG00000024525	Alkbh8	99	54.394	ENSPNAG00000020902	alkbh8	98	54.394	Pygocentrus_nattereri
ENSRNOG00000024525	Alkbh8	100	77.410	ENSRBIG00000032575	ALKBH8	100	77.410	Rhinopithecus_bieti
ENSRNOG00000024525	Alkbh8	100	77.560	ENSRROG00000039484	ALKBH8	100	77.560	Rhinopithecus_roxellana
ENSRNOG00000024525	Alkbh8	100	76.355	ENSSBOG00000031504	ALKBH8	100	76.355	Saimiri_boliviensis_boliviensis
ENSRNOG00000024525	Alkbh8	100	67.262	ENSSHAG00000014253	ALKBH8	99	67.262	Sarcophilus_harrisii
ENSRNOG00000024525	Alkbh8	94	53.470	ENSSFOG00015003173	alkbh8	99	53.470	Scleropages_formosus
ENSRNOG00000024525	Alkbh8	99	49.233	ENSSMAG00000018948	alkbh8	98	49.372	Scophthalmus_maximus
ENSRNOG00000024525	Alkbh8	98	62.222	ENSSDUG00000001609	alkbh8	99	52.830	Seriola_dumerili
ENSRNOG00000024525	Alkbh8	98	52.827	ENSSLDG00000002033	alkbh8	99	53.125	Seriola_lalandi_dorsalis
ENSRNOG00000024525	Alkbh8	99	61.689	ENSSARG00000008350	ALKBH8	100	61.689	Sorex_araneus
ENSRNOG00000024525	Alkbh8	99	64.006	ENSSPUG00000015167	ALKBH8	98	63.404	Sphenodon_punctatus
ENSRNOG00000024525	Alkbh8	98	60.465	ENSSPAG00000012412	alkbh8	98	52.459	Stegastes_partitus
ENSRNOG00000024525	Alkbh8	86	75.610	ENSSSCG00000024628	ALKBH8	93	75.610	Sus_scrofa
ENSRNOG00000024525	Alkbh8	99	64.902	ENSTGUG00000012660	-	100	64.902	Taeniopygia_guttata
ENSRNOG00000024525	Alkbh8	99	48.199	ENSTRUG00000006986	alkbh8	99	48.671	Takifugu_rubripes
ENSRNOG00000024525	Alkbh8	99	48.722	ENSTNIG00000010286	alkbh8	99	48.722	Tetraodon_nigroviridis
ENSRNOG00000024525	Alkbh8	97	70.078	ENSTBEG00000002728	ALKBH8	100	70.078	Tupaia_belangeri
ENSRNOG00000024525	Alkbh8	100	69.277	ENSTTRG00000000238	ALKBH8	100	69.277	Tursiops_truncatus
ENSRNOG00000024525	Alkbh8	100	74.849	ENSUMAG00000008743	ALKBH8	100	74.849	Ursus_maritimus
ENSRNOG00000024525	Alkbh8	100	67.319	ENSVPAG00000004932	ALKBH8	100	67.319	Vicugna_pacos
ENSRNOG00000024525	Alkbh8	100	74.247	ENSVVUG00000013994	ALKBH8	98	74.247	Vulpes_vulpes
ENSRNOG00000024525	Alkbh8	99	59.639	ENSXETG00000014487	alkbh8	99	59.639	Xenopus_tropicalis
ENSRNOG00000024525	Alkbh8	99	52.709	ENSXCOG00000010055	alkbh8	99	52.674	Xiphophorus_couchianus
ENSRNOG00000024525	Alkbh8	99	52.616	ENSXMAG00000010877	alkbh8	99	52.762	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	21873635.	IBA	Function
GO:0000049	tRNA binding	-	ISO	Function
GO:0002098	tRNA wobble uridine modification	21873635.	IBA	Process
GO:0002098	tRNA wobble uridine modification	-	ISO	Process
GO:0005506	iron ion binding	-	IEA	Function
GO:0005506	iron ion binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0008270	zinc ion binding	-	ISO	Function
GO:0016300	tRNA (uracil) methyltransferase activity	21873635.	IBA	Function
GO:0016300	tRNA (uracil) methyltransferase activity	-	ISO	Function
GO:0016604	nuclear body	-	IEA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	21873635.	IBA	Function
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	-	ISO	Function
GO:0030488	tRNA methylation	-	IEA	Process
GO:0030488	tRNA methylation	-	ISO	Process
GO:0055114	oxidation-reduction process	-	IEA	Process
GO:0055114	oxidation-reduction process	-	ISO	Process