EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000024580 (Gene tree)
Gene ID: 691041
Gene Symbol: Mamstr
Alias: LOC691041
Full Name: MEF2 activating motif and SAP domain containing transcriptional regulator
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 4302 bases
Position: chr1:101623308-101627609
Accession: 1588652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000030320	SAP	PF02037.27	7.1e-10	1	1
ENSRNOP00000053047	SAP	PF02037.27	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000029220	-	573	-	ENSRNOP00000030320	190 (aa)	-	D4A581
ENSRNOT00000029167	-	1260	XM_001076631	ENSRNOP00000053047	419 (aa)	XP_001076631	D3ZHU3

Gene Model

Click here to download ENSRNOG00000024580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000024580's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000024580	Mamstr	100	74.588	ENSG00000176909	MAMSTR	100	74.353	Homo_sapiens
ENSRNOG00000024580	Mamstr	100	66.667	ENSAMEG00000014802	MAMSTR	100	66.667	Ailuropoda_melanoleuca
ENSRNOG00000024580	Mamstr	85	61.446	ENSANAG00000025139	MAMSTR	79	63.239	Aotus_nancymaae
ENSRNOG00000024580	Mamstr	100	69.954	ENSBTAG00000011617	MAMSTR	100	68.864	Bos_taurus
ENSRNOG00000024580	Mamstr	100	72.600	ENSCJAG00000000326	MAMSTR	100	71.765	Callithrix_jacchus
ENSRNOG00000024580	Mamstr	100	68.337	ENSCAFG00000003914	MAMSTR	100	68.109	Canis_familiaris
ENSRNOG00000024580	Mamstr	100	63.170	ENSCAFG00020026340	MAMSTR	100	63.403	Canis_lupus_dingo
ENSRNOG00000024580	Mamstr	100	68.310	ENSCHIG00000017698	MAMSTR	100	67.209	Capra_hircus
ENSRNOG00000024580	Mamstr	100	74.057	ENSTSYG00000026265	MAMSTR	100	73.821	Carlito_syrichta
ENSRNOG00000024580	Mamstr	100	62.353	ENSCPOG00000031881	MAMSTR	100	62.353	Cavia_porcellus
ENSRNOG00000024580	Mamstr	100	72.941	ENSCCAG00000029438	MAMSTR	100	72.941	Cebus_capucinus
ENSRNOG00000024580	Mamstr	76	72.050	ENSCATG00000031813	MAMSTR	100	71.429	Cercocebus_atys
ENSRNOG00000024580	Mamstr	100	64.965	ENSCLAG00000005822	MAMSTR	100	64.733	Chinchilla_lanigera
ENSRNOG00000024580	Mamstr	100	73.944	ENSCSAG00000002823	MAMSTR	100	73.709	Chlorocebus_sabaeus
ENSRNOG00000024580	Mamstr	100	75.059	ENSCANG00000016741	MAMSTR	100	74.824	Colobus_angolensis_palliatus
ENSRNOG00000024580	Mamstr	100	86.158	ENSCGRG00001018713	Mamstr	100	83.178	Cricetulus_griseus_chok1gshd
ENSRNOG00000024580	Mamstr	100	67.269	ENSDNOG00000034507	MAMSTR	100	69.159	Dasypus_novemcinctus
ENSRNOG00000024580	Mamstr	100	60.613	ENSDORG00000001229	Mamstr	100	63.443	Dipodomys_ordii
ENSRNOG00000024580	Mamstr	67	93.548	ENSETEG00000017393	-	65	93.548	Echinops_telfairi
ENSRNOG00000024580	Mamstr	99	67.619	ENSEASG00005004688	MAMSTR	92	67.619	Equus_asinus_asinus
ENSRNOG00000024580	Mamstr	99	68.941	ENSECAG00000020390	MAMSTR	99	69.412	Equus_caballus
ENSRNOG00000024580	Mamstr	92	61.323	ENSEEUG00000011877	MAMSTR	90	61.017	Erinaceus_europaeus
ENSRNOG00000024580	Mamstr	93	59.218	ENSFCAG00000007361	MAMSTR	100	68.323	Felis_catus
ENSRNOG00000024580	Mamstr	100	74.824	ENSGGOG00000001237	MAMSTR	100	74.588	Gorilla_gorilla
ENSRNOG00000024580	Mamstr	100	64.651	ENSHGLG00000016428	MAMSTR	100	62.326	Heterocephalus_glaber_female
ENSRNOG00000024580	Mamstr	100	65.094	ENSHGLG00100005311	MAMSTR	100	62.736	Heterocephalus_glaber_male
ENSRNOG00000024580	Mamstr	100	76.415	ENSSTOG00000020068	MAMSTR	100	76.887	Ictidomys_tridecemlineatus
ENSRNOG00000024580	Mamstr	100	70.755	ENSJJAG00000017177	Mamstr	100	68.322	Jaculus_jaculus
ENSRNOG00000024580	Mamstr	100	70.922	ENSLAFG00000017394	MAMSTR	100	70.922	Loxodonta_africana
ENSRNOG00000024580	Mamstr	100	74.824	ENSMFAG00000045502	MAMSTR	100	74.353	Macaca_fascicularis
ENSRNOG00000024580	Mamstr	100	74.118	ENSMNEG00000041978	MAMSTR	100	74.118	Macaca_nemestrina
ENSRNOG00000024580	Mamstr	100	80.668	ENSMAUG00000013527	Mamstr	100	82.701	Mesocricetus_auratus
ENSRNOG00000024580	Mamstr	100	72.000	ENSMICG00000013193	MAMSTR	100	71.529	Microcebus_murinus
ENSRNOG00000024580	Mamstr	99	84.173	ENSMOCG00000020029	Mamstr	99	85.132	Microtus_ochrogaster
ENSRNOG00000024580	Mamstr	67	46.075	ENSMODG00000002229	-	80	33.555	Monodelphis_domestica
ENSRNOG00000024580	Mamstr	100	89.336	MGP_CAROLIEiJ_G0029733	-	100	92.891	Mus_caroli
ENSRNOG00000024580	Mamstr	100	89.100	ENSMUSG00000042918	Mamstr	100	90.995	Mus_musculus
ENSRNOG00000024580	Mamstr	100	94.299	MGP_PahariEiJ_G0012958	Mamstr	100	94.774	Mus_pahari
ENSRNOG00000024580	Mamstr	100	88.679	MGP_SPRETEiJ_G0030831	-	100	90.566	Mus_spretus
ENSRNOG00000024580	Mamstr	100	66.667	ENSMPUG00000003791	MAMSTR	100	66.287	Mustela_putorius_furo
ENSRNOG00000024580	Mamstr	100	80.430	ENSNGAG00000016579	Mamstr	100	80.430	Nannospalax_galili
ENSRNOG00000024580	Mamstr	56	70.763	ENSNLEG00000004605	-	100	69.915	Nomascus_leucogenys
ENSRNOG00000024580	Mamstr	67	51.601	ENSMEUG00000015223	-	88	45.113	Notamacropus_eugenii
ENSRNOG00000024580	Mamstr	95	50.802	ENSOPRG00000015106	MAMSTR	60	63.878	Ochotona_princeps
ENSRNOG00000024580	Mamstr	100	58.933	ENSODEG00000017655	MAMSTR	100	58.237	Octodon_degus
ENSRNOG00000024580	Mamstr	57	67.213	ENSOCUG00000021342	-	100	58.696	Oryctolagus_cuniculus
ENSRNOG00000024580	Mamstr	100	67.294	ENSOGAG00000003568	MAMSTR	100	66.118	Otolemur_garnettii
ENSRNOG00000024580	Mamstr	100	69.037	ENSOARG00000012032	MAMSTR	100	68.182	Ovis_aries
ENSRNOG00000024580	Mamstr	93	59.218	ENSPPRG00000004054	MAMSTR	100	68.323	Panthera_pardus
ENSRNOG00000024580	Mamstr	76	73.292	ENSPTRG00000011253	MAMSTR	100	73.292	Pan_troglodytes
ENSRNOG00000024580	Mamstr	100	74.353	ENSPANG00000022678	MAMSTR	100	73.882	Papio_anubis
ENSRNOG00000024580	Mamstr	79	58.462	ENSPCIG00000001155	-	86	51.145	Phascolarctos_cinereus
ENSRNOG00000024580	Mamstr	85	64.024	ENSPPYG00000010591	-	100	72.981	Pongo_abelii
ENSRNOG00000024580	Mamstr	85	57.317	ENSPCAG00000001125	-	99	66.013	Procavia_capensis
ENSRNOG00000024580	Mamstr	100	72.834	ENSPCOG00000023398	MAMSTR	100	73.068	Propithecus_coquereli
ENSRNOG00000024580	Mamstr	100	60.941	ENSPVAG00000009535	MAMSTR	100	62.353	Pteropus_vampyrus
ENSRNOG00000024580	Mamstr	76	73.602	ENSRBIG00000043644	MAMSTR	100	73.602	Rhinopithecus_bieti
ENSRNOG00000024580	Mamstr	100	75.529	ENSRROG00000033087	MAMSTR	100	75.294	Rhinopithecus_roxellana
ENSRNOG00000024580	Mamstr	100	71.529	ENSSBOG00000028762	MAMSTR	100	71.059	Saimiri_boliviensis_boliviensis
ENSRNOG00000024580	Mamstr	100	68.075	ENSSARG00000002931	MAMSTR	100	68.075	Sorex_araneus
ENSRNOG00000024580	Mamstr	100	70.657	ENSSSCG00000003143	MAMSTR	100	72.600	Sus_scrofa
ENSRNOG00000024580	Mamstr	100	67.689	ENSTTRG00000014557	MAMSTR	100	67.453	Tursiops_truncatus
ENSRNOG00000024580	Mamstr	100	67.517	ENSUAMG00000010490	MAMSTR	100	67.749	Ursus_americanus
ENSRNOG00000024580	Mamstr	52	76.699	ENSVPAG00000005989	-	67	73.292	Vicugna_pacos
ENSRNOG00000024580	Mamstr	100	66.970	ENSVVUG00000023147	MAMSTR	100	65.909	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001085	RNA polymerase II transcription factor binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0010831	positive regulation of myotube differentiation	-	IEA	Process
GO:0010831	positive regulation of myotube differentiation	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process