EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000024796 (Gene tree)
Gene ID: 362672
Gene Symbol: Lrrc47
Alias: LOC362672|RGD1308599
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 9833 bases
Position: chr5:171297850-171307682
Accession: 1308599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000036336	B3_4	PF03483.17	1.1e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000034284	-	2893	-	ENSRNOP00000036336	580 (aa)	-	F1LT49

Gene Model

Click here to download ENSRNOG00000024796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000024796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000024796	Lrrc47	99	86.770	ENSG00000130764	LRRC47	99	85.739	Homo_sapiens
ENSRNOG00000024796	Lrrc47	97	54.049	ENSAPOG00000019553	lrrc47	98	54.225	Acanthochromis_polyacanthus
ENSRNOG00000024796	Lrrc47	79	76.087	ENSAMEG00000009152	LRRC47	100	76.087	Ailuropoda_melanoleuca
ENSRNOG00000024796	Lrrc47	66	67.708	ENSAPLG00000003167	LRRC47	100	65.274	Anas_platyrhynchos
ENSRNOG00000024796	Lrrc47	65	65.707	ENSACAG00000008267	LRRC47	99	65.526	Anolis_carolinensis
ENSRNOG00000024796	Lrrc47	99	86.254	ENSANAG00000025576	LRRC47	99	85.223	Aotus_nancymaae
ENSRNOG00000024796	Lrrc47	100	82.161	ENSBTAG00000004738	LRRC47	100	81.100	Bos_taurus
ENSRNOG00000024796	Lrrc47	99	80.870	ENSCAFG00000019492	LRRC47	99	79.725	Canis_familiaris
ENSRNOG00000024796	Lrrc47	100	80.617	ENSCAFG00020009667	LRRC47	100	79.931	Canis_lupus_dingo
ENSRNOG00000024796	Lrrc47	100	82.504	ENSCHIG00000022607	LRRC47	99	80.723	Capra_hircus
ENSRNOG00000024796	Lrrc47	95	85.458	ENSTSYG00000009326	LRRC47	96	84.560	Carlito_syrichta
ENSRNOG00000024796	Lrrc47	64	82.713	ENSCAPG00000016517	LRRC47	100	81.649	Cavia_aperea
ENSRNOG00000024796	Lrrc47	99	86.552	ENSCPOG00000014931	LRRC47	96	85.862	Cavia_porcellus
ENSRNOG00000024796	Lrrc47	99	86.254	ENSCCAG00000024895	LRRC47	99	85.052	Cebus_capucinus
ENSRNOG00000024796	Lrrc47	99	87.973	ENSCATG00000029337	LRRC47	99	86.598	Cercocebus_atys
ENSRNOG00000024796	Lrrc47	99	87.414	ENSCLAG00000006093	LRRC47	99	85.690	Chinchilla_lanigera
ENSRNOG00000024796	Lrrc47	99	87.973	ENSCSAG00000000727	LRRC47	99	86.598	Chlorocebus_sabaeus
ENSRNOG00000024796	Lrrc47	99	61.065	ENSCPBG00000019404	LRRC47	99	59.900	Chrysemys_picta_bellii
ENSRNOG00000024796	Lrrc47	78	83.948	ENSCANG00000030701	LRRC47	96	83.297	Colobus_angolensis_palliatus
ENSRNOG00000024796	Lrrc47	99	93.531	ENSCGRG00001015159	Lrrc47	90	92.919	Cricetulus_griseus_chok1gshd
ENSRNOG00000024796	Lrrc47	65	91.512	ENSCGRG00000017336	Lrrc47	100	91.711	Cricetulus_griseus_crigri
ENSRNOG00000024796	Lrrc47	99	52.759	ENSCSEG00000006217	lrrc47	97	52.931	Cynoglossus_semilaevis
ENSRNOG00000024796	Lrrc47	64	81.915	ENSDORG00000016594	Lrrc47	99	79.255	Dipodomys_ordii
ENSRNOG00000024796	Lrrc47	99	82.990	ENSEASG00005021788	LRRC47	99	82.990	Equus_asinus_asinus
ENSRNOG00000024796	Lrrc47	99	82.699	ENSECAG00000022472	LRRC47	90	82.646	Equus_caballus
ENSRNOG00000024796	Lrrc47	98	52.840	ENSELUG00000017544	lrrc47	97	53.448	Esox_lucius
ENSRNOG00000024796	Lrrc47	94	81.170	ENSFCAG00000011632	LRRC47	97	80.978	Felis_catus
ENSRNOG00000024796	Lrrc47	78	62.306	ENSFALG00000009631	LRRC47	99	61.839	Ficedula_albicollis
ENSRNOG00000024796	Lrrc47	97	52.028	ENSGMOG00000015674	lrrc47	97	51.664	Gadus_morhua
ENSRNOG00000024796	Lrrc47	99	61.552	ENSGALG00000050995	LRRC47	100	62.586	Gallus_gallus
ENSRNOG00000024796	Lrrc47	99	52.677	ENSGACG00000005550	lrrc47	99	52.850	Gasterosteus_aculeatus
ENSRNOG00000024796	Lrrc47	100	63.228	ENSGAGG00000022584	LRRC47	100	62.063	Gopherus_agassizii
ENSRNOG00000024796	Lrrc47	99	86.942	ENSGGOG00000015571	LRRC47	99	85.911	Gorilla_gorilla
ENSRNOG00000024796	Lrrc47	99	85.517	ENSHGLG00000018278	LRRC47	96	84.828	Heterocephalus_glaber_female
ENSRNOG00000024796	Lrrc47	69	81.886	ENSHGLG00100008507	LRRC47	100	80.893	Heterocephalus_glaber_male
ENSRNOG00000024796	Lrrc47	99	54.419	ENSHCOG00000006348	lrrc47	98	54.419	Hippocampus_comes
ENSRNOG00000024796	Lrrc47	99	86.207	ENSSTOG00000027559	LRRC47	99	87.047	Ictidomys_tridecemlineatus
ENSRNOG00000024796	Lrrc47	99	89.391	ENSJJAG00000017474	Lrrc47	97	87.586	Jaculus_jaculus
ENSRNOG00000024796	Lrrc47	99	53.979	ENSKMAG00000003414	lrrc47	99	53.806	Kryptolebias_marmoratus
ENSRNOG00000024796	Lrrc47	99	81.100	ENSLAFG00000011657	LRRC47	99	81.100	Loxodonta_africana
ENSRNOG00000024796	Lrrc47	74	97.073	ENSMFAG00000045730	LRRC47	89	97.073	Macaca_fascicularis
ENSRNOG00000024796	Lrrc47	100	88.185	ENSMNEG00000042488	LRRC47	100	86.644	Macaca_nemestrina
ENSRNOG00000024796	Lrrc47	77	82.483	ENSMLEG00000043735	LRRC47	91	81.818	Mandrillus_leucophaeus
ENSRNOG00000024796	Lrrc47	99	94.444	ENSMAUG00000021337	Lrrc47	98	94.444	Mesocricetus_auratus
ENSRNOG00000024796	Lrrc47	99	85.370	ENSMICG00000026816	LRRC47	99	84.165	Microcebus_murinus
ENSRNOG00000024796	Lrrc47	99	94.637	ENSMOCG00000021279	Lrrc47	99	94.637	Microtus_ochrogaster
ENSRNOG00000024796	Lrrc47	99	52.677	ENSMMOG00000017007	lrrc47	99	52.504	Mola_mola
ENSRNOG00000024796	Lrrc47	99	70.804	ENSMODG00000006554	LRRC47	100	69.811	Monodelphis_domestica
ENSRNOG00000024796	Lrrc47	99	95.993	MGP_CAROLIEiJ_G0026864	Lrrc47	99	96.028	Mus_caroli
ENSRNOG00000024796	Lrrc47	99	95.645	ENSMUSG00000029028	Lrrc47	99	95.682	Mus_musculus
ENSRNOG00000024796	Lrrc47	99	95.637	MGP_PahariEiJ_G0029212	Lrrc47	99	95.509	Mus_pahari
ENSRNOG00000024796	Lrrc47	99	95.645	MGP_SPRETEiJ_G0027857	Lrrc47	99	95.682	Mus_spretus
ENSRNOG00000024796	Lrrc47	65	74.603	ENSMPUG00000007321	LRRC47	75	74.603	Mustela_putorius_furo
ENSRNOG00000024796	Lrrc47	98	90.526	ENSNGAG00000022153	Lrrc47	99	90.830	Nannospalax_galili
ENSRNOG00000024796	Lrrc47	99	82.646	ENSNLEG00000008131	LRRC47	99	82.131	Nomascus_leucogenys
ENSRNOG00000024796	Lrrc47	84	84.867	ENSODEG00000010882	LRRC47	93	82.413	Octodon_degus
ENSRNOG00000024796	Lrrc47	96	55.893	ENSORLG00000002532	lrrc47	100	55.714	Oryzias_latipes
ENSRNOG00000024796	Lrrc47	99	55.709	ENSORLG00020019601	lrrc47	99	55.536	Oryzias_latipes_hni
ENSRNOG00000024796	Lrrc47	99	55.190	ENSORLG00015014040	lrrc47	99	55.017	Oryzias_latipes_hsok
ENSRNOG00000024796	Lrrc47	99	54.498	ENSOMEG00000008989	lrrc47	99	53.979	Oryzias_melastigma
ENSRNOG00000024796	Lrrc47	99	85.395	ENSOGAG00000001553	LRRC47	99	83.849	Otolemur_garnettii
ENSRNOG00000024796	Lrrc47	100	78.731	ENSOARG00000015290	LRRC47	100	77.663	Ovis_aries
ENSRNOG00000024796	Lrrc47	97	82.670	ENSPPAG00000036370	-	99	81.967	Pan_paniscus
ENSRNOG00000024796	Lrrc47	99	80.763	ENSPPRG00000005261	LRRC47	99	80.241	Panthera_pardus
ENSRNOG00000024796	Lrrc47	99	86.942	ENSPTRG00000000068	LRRC47	99	85.911	Pan_troglodytes
ENSRNOG00000024796	Lrrc47	99	87.973	ENSPANG00000012437	LRRC47	99	86.598	Papio_anubis
ENSRNOG00000024796	Lrrc47	65	66.404	ENSPSIG00000004196	LRRC47	100	63.517	Pelodiscus_sinensis
ENSRNOG00000024796	Lrrc47	64	94.385	ENSPEMG00000021068	Lrrc47	100	94.385	Peromyscus_maniculatus_bairdii
ENSRNOG00000024796	Lrrc47	98	71.629	ENSPCIG00000003638	LRRC47	100	71.795	Phascolarctos_cinereus
ENSRNOG00000024796	Lrrc47	94	54.312	ENSPFOG00000000992	lrrc47	94	54.312	Poecilia_formosa
ENSRNOG00000024796	Lrrc47	99	54.609	ENSPLAG00000008077	lrrc47	99	54.609	Poecilia_latipinna
ENSRNOG00000024796	Lrrc47	99	54.261	ENSPMEG00000007367	lrrc47	99	54.261	Poecilia_mexicana
ENSRNOG00000024796	Lrrc47	99	86.770	ENSPPYG00000001960	LRRC47	99	85.739	Pongo_abelii
ENSRNOG00000024796	Lrrc47	100	86.106	ENSPCOG00000019161	LRRC47	100	84.906	Propithecus_coquereli
ENSRNOG00000024796	Lrrc47	99	79.897	ENSPVAG00000009839	LRRC47	99	79.553	Pteropus_vampyrus
ENSRNOG00000024796	Lrrc47	100	53.253	ENSPNAG00000017982	lrrc47	100	52.568	Pygocentrus_nattereri
ENSRNOG00000024796	Lrrc47	99	87.973	ENSRBIG00000019437	LRRC47	99	86.598	Rhinopithecus_bieti
ENSRNOG00000024796	Lrrc47	99	87.973	ENSRROG00000043182	LRRC47	99	86.598	Rhinopithecus_roxellana
ENSRNOG00000024796	Lrrc47	80	81.053	ENSSBOG00000026334	LRRC47	92	82.781	Saimiri_boliviensis_boliviensis
ENSRNOG00000024796	Lrrc47	98	59.863	ENSSHAG00000007360	LRRC47	100	58.655	Sarcophilus_harrisii
ENSRNOG00000024796	Lrrc47	98	54.007	ENSSMAG00000009344	lrrc47	99	54.181	Scophthalmus_maximus
ENSRNOG00000024796	Lrrc47	97	54.610	ENSSDUG00000014618	lrrc47	97	55.142	Seriola_dumerili
ENSRNOG00000024796	Lrrc47	97	54.787	ENSSLDG00000018908	lrrc47	97	54.787	Seriola_lalandi_dorsalis
ENSRNOG00000024796	Lrrc47	99	60.751	ENSSPUG00000010277	LRRC47	99	59.696	Sphenodon_punctatus
ENSRNOG00000024796	Lrrc47	99	55.017	ENSSPAG00000005188	lrrc47	99	55.017	Stegastes_partitus
ENSRNOG00000024796	Lrrc47	100	80.789	ENSSSCG00000039516	LRRC47	100	81.132	Sus_scrofa
ENSRNOG00000024796	Lrrc47	70	65.271	ENSTGUG00000002737	LRRC47	99	63.457	Taeniopygia_guttata
ENSRNOG00000024796	Lrrc47	99	53.125	ENSTRUG00000017696	lrrc47	99	52.696	Takifugu_rubripes
ENSRNOG00000024796	Lrrc47	99	51.986	ENSTNIG00000010923	lrrc47	99	51.736	Tetraodon_nigroviridis
ENSRNOG00000024796	Lrrc47	100	80.993	ENSTTRG00000011751	LRRC47	100	80.993	Tursiops_truncatus
ENSRNOG00000024796	Lrrc47	88	78.752	ENSUAMG00000012080	LRRC47	97	79.922	Ursus_americanus
ENSRNOG00000024796	Lrrc47	65	74.278	ENSUMAG00000010781	LRRC47	81	74.278	Ursus_maritimus
ENSRNOG00000024796	Lrrc47	99	73.299	ENSVVUG00000027118	LRRC47	99	70.034	Vulpes_vulpes
ENSRNOG00000024796	Lrrc47	99	60.137	ENSXETG00000006029	lrrc47	99	59.278	Xenopus_tropicalis
ENSRNOG00000024796	Lrrc47	98	54.912	ENSXCOG00000002813	lrrc47	98	54.912	Xiphophorus_couchianus
ENSRNOG00000024796	Lrrc47	98	54.545	ENSXMAG00000019386	lrrc47	99	54.466	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004826	phenylalanine-tRNA ligase activity	21873635.	IBA	Function