EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000024879 (Gene tree)
Gene ID: 299604
Gene Symbol: Polrmt
Alias: LOC299604
Full Name: RNA polymerase mitochondrial
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 10216 bases
Position: chr7:12840938-12851153
Accession: 1304599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000032448	RNA_pol	PF00940.19	9.9e-165	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000039232	-	3745	XM_006240859	ENSRNOP00000032448	1203 (aa)	XP_006240921	D3ZYB6

Gene Model

Click here to download ENSRNOG00000024879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000024879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000024879	Polrmt	100	64.891	ENSG00000099821	POLRMT	100	64.891	Homo_sapiens
ENSRNOG00000024879	Polrmt	86	51.635	ENSAPOG00000003942	polrmt	78	51.635	Acanthochromis_polyacanthus
ENSRNOG00000024879	Polrmt	100	65.024	ENSAMEG00000002745	POLRMT	100	65.024	Ailuropoda_melanoleuca
ENSRNOG00000024879	Polrmt	93	48.872	ENSACIG00000016078	polrmt	99	48.872	Amphilophus_citrinellus
ENSRNOG00000024879	Polrmt	94	47.268	ENSAOCG00000020208	polrmt	94	47.268	Amphiprion_ocellaris
ENSRNOG00000024879	Polrmt	94	46.761	ENSAPEG00000007949	polrmt	92	46.678	Amphiprion_percula
ENSRNOG00000024879	Polrmt	95	46.594	ENSATEG00000024025	polrmt	94	46.594	Anabas_testudineus
ENSRNOG00000024879	Polrmt	84	53.711	ENSAPLG00000003051	POLRMT	100	53.711	Anas_platyrhynchos
ENSRNOG00000024879	Polrmt	99	62.621	ENSANAG00000032916	POLRMT	99	62.621	Aotus_nancymaae
ENSRNOG00000024879	Polrmt	86	50.962	ENSACLG00000003766	polrmt	80	51.056	Astatotilapia_calliptera
ENSRNOG00000024879	Polrmt	99	57.226	ENSAMXG00000018258	polrmt	98	57.226	Astyanax_mexicanus
ENSRNOG00000024879	Polrmt	100	65.378	ENSBTAG00000015051	POLRMT	100	65.484	Bos_taurus
ENSRNOG00000024879	Polrmt	50	41.920	WBGene00013680	rpom-1	53	41.920	Caenorhabditis_elegans
ENSRNOG00000024879	Polrmt	99	61.538	ENSCJAG00000012913	POLRMT	99	61.538	Callithrix_jacchus
ENSRNOG00000024879	Polrmt	100	65.850	ENSCAFG00000019711	POLRMT	100	65.850	Canis_familiaris
ENSRNOG00000024879	Polrmt	100	65.850	ENSCAFG00020016843	POLRMT	100	65.850	Canis_lupus_dingo
ENSRNOG00000024879	Polrmt	100	65.366	ENSCHIG00000013267	POLRMT	100	65.472	Capra_hircus
ENSRNOG00000024879	Polrmt	93	71.827	ENSCAPG00000016900	POLRMT	100	71.827	Cavia_aperea
ENSRNOG00000024879	Polrmt	100	60.556	ENSCPOG00000023061	POLRMT	100	60.802	Cavia_porcellus
ENSRNOG00000024879	Polrmt	100	62.308	ENSCCAG00000025014	POLRMT	100	62.308	Cebus_capucinus
ENSRNOG00000024879	Polrmt	100	64.032	ENSCATG00000040393	POLRMT	100	64.032	Cercocebus_atys
ENSRNOG00000024879	Polrmt	93	67.992	ENSCLAG00000007473	POLRMT	85	65.153	Chinchilla_lanigera
ENSRNOG00000024879	Polrmt	100	62.288	ENSCSAG00000012942	POLRMT	100	62.288	Chlorocebus_sabaeus
ENSRNOG00000024879	Polrmt	97	49.585	ENSCPBG00000009869	POLRMT	100	51.986	Chrysemys_picta_bellii
ENSRNOG00000024879	Polrmt	66	43.696	ENSCSAVG00000000440	-	99	43.696	Ciona_savignyi
ENSRNOG00000024879	Polrmt	100	64.758	ENSCANG00000038011	POLRMT	100	64.758	Colobus_angolensis_palliatus
ENSRNOG00000024879	Polrmt	98	85.561	ENSCGRG00001021311	Polrmt	100	85.561	Cricetulus_griseus_chok1gshd
ENSRNOG00000024879	Polrmt	100	81.343	ENSCGRG00000011134	Polrmt	100	81.343	Cricetulus_griseus_crigri
ENSRNOG00000024879	Polrmt	91	49.009	ENSCSEG00000002734	polrmt	84	49.009	Cynoglossus_semilaevis
ENSRNOG00000024879	Polrmt	96	46.627	ENSCVAG00000005949	polrmt	98	46.867	Cyprinodon_variegatus
ENSRNOG00000024879	Polrmt	97	45.418	ENSDARG00000101220	polrmt	96	45.418	Danio_rerio
ENSRNOG00000024879	Polrmt	95	77.687	ENSDORG00000014125	Polrmt	99	77.687	Dipodomys_ordii
ENSRNOG00000024879	Polrmt	84	42.910	FBgn0261938	mtRNApol	78	43.004	Drosophila_melanogaster
ENSRNOG00000024879	Polrmt	100	61.296	ENSETEG00000003476	POLRMT	100	61.377	Echinops_telfairi
ENSRNOG00000024879	Polrmt	76	49.623	ENSEBUG00000013453	-	99	49.623	Eptatretus_burgeri
ENSRNOG00000024879	Polrmt	100	67.642	ENSEASG00005021493	POLRMT	100	67.886	Equus_asinus_asinus
ENSRNOG00000024879	Polrmt	100	67.587	ENSECAG00000032711	POLRMT	100	67.750	Equus_caballus
ENSRNOG00000024879	Polrmt	89	49.954	ENSELUG00000019319	polrmt	80	49.954	Esox_lucius
ENSRNOG00000024879	Polrmt	100	66.262	ENSFCAG00000018808	POLRMT	100	66.343	Felis_catus
ENSRNOG00000024879	Polrmt	83	47.188	ENSFALG00000013910	POLRMT	99	46.922	Ficedula_albicollis
ENSRNOG00000024879	Polrmt	100	57.187	ENSFDAG00000020312	POLRMT	100	57.209	Fukomys_damarensis
ENSRNOG00000024879	Polrmt	84	51.026	ENSFHEG00000021239	polrmt	86	50.592	Fundulus_heteroclitus
ENSRNOG00000024879	Polrmt	93	48.007	ENSGMOG00000011829	polrmt	98	46.886	Gadus_morhua
ENSRNOG00000024879	Polrmt	84	53.235	ENSGALG00000001377	POLRMT	99	48.016	Gallus_gallus
ENSRNOG00000024879	Polrmt	84	52.195	ENSGAFG00000003953	polrmt	77	52.195	Gambusia_affinis
ENSRNOG00000024879	Polrmt	93	47.126	ENSGACG00000012957	polrmt	95	47.126	Gasterosteus_aculeatus
ENSRNOG00000024879	Polrmt	95	51.361	ENSGAGG00000005522	POLRMT	100	51.361	Gopherus_agassizii
ENSRNOG00000024879	Polrmt	81	81.366	ENSGGOG00000023264	-	95	81.366	Gorilla_gorilla
ENSRNOG00000024879	Polrmt	84	52.067	ENSHBUG00000010005	polrmt	76	52.067	Haplochromis_burtoni
ENSRNOG00000024879	Polrmt	91	67.694	ENSHGLG00000019286	POLRMT	86	67.554	Heterocephalus_glaber_female
ENSRNOG00000024879	Polrmt	100	60.746	ENSHGLG00100005762	POLRMT	100	60.746	Heterocephalus_glaber_male
ENSRNOG00000024879	Polrmt	97	46.821	ENSHCOG00000001565	polrmt	97	47.187	Hippocampus_comes
ENSRNOG00000024879	Polrmt	97	46.993	ENSIPUG00000000789	polrmt	95	48.709	Ictalurus_punctatus
ENSRNOG00000024879	Polrmt	92	82.353	ENSSTOG00000003431	POLRMT	100	82.353	Ictidomys_tridecemlineatus
ENSRNOG00000024879	Polrmt	95	75.923	ENSJJAG00000012916	Polrmt	99	75.923	Jaculus_jaculus
ENSRNOG00000024879	Polrmt	96	45.789	ENSKMAG00000004426	polrmt	95	45.789	Kryptolebias_marmoratus
ENSRNOG00000024879	Polrmt	85	50.723	ENSLBEG00000016529	polrmt	95	45.118	Labrus_bergylta
ENSRNOG00000024879	Polrmt	97	47.199	ENSLACG00000011518	POLRMT	99	47.199	Latimeria_chalumnae
ENSRNOG00000024879	Polrmt	99	41.089	ENSLOCG00000005222	polrmt	97	41.089	Lepisosteus_oculatus
ENSRNOG00000024879	Polrmt	99	65.517	ENSLAFG00000001860	POLRMT	100	65.928	Loxodonta_africana
ENSRNOG00000024879	Polrmt	100	64.625	ENSMFAG00000031466	POLRMT	100	64.625	Macaca_fascicularis
ENSRNOG00000024879	Polrmt	100	64.867	ENSMNEG00000039129	POLRMT	100	64.867	Macaca_nemestrina
ENSRNOG00000024879	Polrmt	89	73.902	ENSMLEG00000037404	POLRMT	100	73.902	Mandrillus_leucophaeus
ENSRNOG00000024879	Polrmt	87	50.844	ENSMAMG00000019284	polrmt	96	45.095	Mastacembelus_armatus
ENSRNOG00000024879	Polrmt	86	50.962	ENSMZEG00005009932	polrmt	80	50.962	Maylandia_zebra
ENSRNOG00000024879	Polrmt	97	49.872	ENSMGAG00000003243	POLRMT	100	50.127	Meleagris_gallopavo
ENSRNOG00000024879	Polrmt	98	85.868	ENSMAUG00000019392	Polrmt	100	85.868	Mesocricetus_auratus
ENSRNOG00000024879	Polrmt	100	67.609	ENSMICG00000016701	POLRMT	100	67.609	Microcebus_murinus
ENSRNOG00000024879	Polrmt	100	80.050	ENSMOCG00000008868	Polrmt	100	80.050	Microtus_ochrogaster
ENSRNOG00000024879	Polrmt	90	43.052	ENSMMOG00000000705	polrmt	94	43.223	Mola_mola
ENSRNOG00000024879	Polrmt	99	50.636	ENSMODG00000006478	POLRMT	99	50.714	Monodelphis_domestica
ENSRNOG00000024879	Polrmt	97	45.212	ENSMALG00000021224	polrmt	96	45.212	Monopterus_albus
ENSRNOG00000024879	Polrmt	100	88.567	MGP_CAROLIEiJ_G0015538	Polrmt	100	88.567	Mus_caroli
ENSRNOG00000024879	Polrmt	100	89.064	ENSMUSG00000020329	Polrmt	100	89.064	Mus_musculus
ENSRNOG00000024879	Polrmt	100	88.245	MGP_PahariEiJ_G0030951	Polrmt	100	88.245	Mus_pahari
ENSRNOG00000024879	Polrmt	100	88.981	MGP_SPRETEiJ_G0016356	Polrmt	100	88.981	Mus_spretus
ENSRNOG00000024879	Polrmt	100	64.777	ENSMPUG00000009910	POLRMT	100	64.777	Mustela_putorius_furo
ENSRNOG00000024879	Polrmt	100	66.911	ENSMLUG00000009223	POLRMT	100	66.911	Myotis_lucifugus
ENSRNOG00000024879	Polrmt	94	87.258	ENSNGAG00000005498	Polrmt	100	87.258	Nannospalax_galili
ENSRNOG00000024879	Polrmt	83	51.793	ENSNBRG00000023530	polrmt	76	51.889	Neolamprologus_brichardi
ENSRNOG00000024879	Polrmt	100	64.194	ENSNLEG00000000718	POLRMT	100	64.194	Nomascus_leucogenys
ENSRNOG00000024879	Polrmt	71	77.680	ENSOPRG00000013579	POLRMT	73	77.680	Ochotona_princeps
ENSRNOG00000024879	Polrmt	95	48.571	ENSONIG00000002405	polrmt	100	48.571	Oreochromis_niloticus
ENSRNOG00000024879	Polrmt	98	46.250	ENSORLG00000004329	polrmt	95	46.328	Oryzias_latipes
ENSRNOG00000024879	Polrmt	98	46.667	ENSORLG00020003896	polrmt	97	47.159	Oryzias_latipes_hni
ENSRNOG00000024879	Polrmt	98	46.011	ENSORLG00015022238	polrmt	95	45.927	Oryzias_latipes_hsok
ENSRNOG00000024879	Polrmt	98	46.902	ENSOMEG00000008292	polrmt	97	47.059	Oryzias_melastigma
ENSRNOG00000024879	Polrmt	100	68.684	ENSOGAG00000007912	POLRMT	100	68.684	Otolemur_garnettii
ENSRNOG00000024879	Polrmt	88	75.983	ENSOARG00000008898	POLRMT	92	75.983	Ovis_aries
ENSRNOG00000024879	Polrmt	100	63.710	ENSPPAG00000030853	POLRMT	99	63.710	Pan_paniscus
ENSRNOG00000024879	Polrmt	99	62.500	ENSPPAG00000043321	-	99	62.500	Pan_paniscus
ENSRNOG00000024879	Polrmt	87	77.410	ENSPPRG00000001547	POLRMT	93	77.410	Panthera_pardus
ENSRNOG00000024879	Polrmt	99	62.753	ENSPTRG00000039638	-	99	62.753	Pan_troglodytes
ENSRNOG00000024879	Polrmt	100	64.113	ENSPTRG00000010157	POLRMT	96	64.113	Pan_troglodytes
ENSRNOG00000024879	Polrmt	100	65.004	ENSPANG00000006649	POLRMT	100	65.004	Papio_anubis
ENSRNOG00000024879	Polrmt	96	46.634	ENSPKIG00000024580	polrmt	95	46.678	Paramormyrops_kingsleyae
ENSRNOG00000024879	Polrmt	85	51.946	ENSPMGG00000014627	polrmt	86	51.946	Periophthalmus_magnuspinnatus
ENSRNOG00000024879	Polrmt	96	89.567	ENSPEMG00000011671	Polrmt	100	89.567	Peromyscus_maniculatus_bairdii
ENSRNOG00000024879	Polrmt	72	48.178	ENSPMAG00000005070	-	100	48.178	Petromyzon_marinus
ENSRNOG00000024879	Polrmt	100	50.593	ENSPCIG00000006103	POLRMT	100	50.593	Phascolarctos_cinereus
ENSRNOG00000024879	Polrmt	97	46.550	ENSPFOG00000003911	polrmt	100	46.960	Poecilia_formosa
ENSRNOG00000024879	Polrmt	84	46.055	ENSPLAG00000005743	polrmt	95	46.055	Poecilia_latipinna
ENSRNOG00000024879	Polrmt	69	40.426	ENSPMEG00000011484	polrmt	95	40.135	Poecilia_mexicana
ENSRNOG00000024879	Polrmt	97	47.107	ENSPMEG00000008947	polrmt	99	47.107	Poecilia_mexicana
ENSRNOG00000024879	Polrmt	84	52.148	ENSPREG00000007650	polrmt	95	45.055	Poecilia_reticulata
ENSRNOG00000024879	Polrmt	94	75.210	ENSPPYG00000009282	POLRMT	100	75.210	Pongo_abelii
ENSRNOG00000024879	Polrmt	100	58.313	ENSPCAG00000010816	POLRMT	100	58.394	Procavia_capensis
ENSRNOG00000024879	Polrmt	100	65.779	ENSPCOG00000014539	POLRMT	100	65.779	Propithecus_coquereli
ENSRNOG00000024879	Polrmt	100	65.260	ENSPVAG00000008403	POLRMT	100	65.341	Pteropus_vampyrus
ENSRNOG00000024879	Polrmt	86	50.769	ENSPNYG00000020790	polrmt	78	50.864	Pundamilia_nyererei
ENSRNOG00000024879	Polrmt	94	46.975	ENSPNAG00000019790	polrmt	96	47.232	Pygocentrus_nattereri
ENSRNOG00000024879	Polrmt	100	64.701	ENSRBIG00000006728	POLRMT	100	64.701	Rhinopithecus_bieti
ENSRNOG00000024879	Polrmt	100	64.620	ENSRROG00000040809	POLRMT	100	64.620	Rhinopithecus_roxellana
ENSRNOG00000024879	Polrmt	99	62.036	ENSSBOG00000025388	POLRMT	99	62.036	Saimiri_boliviensis_boliviensis
ENSRNOG00000024879	Polrmt	67	58.303	ENSSHAG00000009387	-	100	58.303	Sarcophilus_harrisii
ENSRNOG00000024879	Polrmt	96	46.645	ENSSFOG00015005074	polrmt	99	46.809	Scleropages_formosus
ENSRNOG00000024879	Polrmt	95	45.909	ENSSMAG00000011851	polrmt	94	45.909	Scophthalmus_maximus
ENSRNOG00000024879	Polrmt	97	46.237	ENSSDUG00000004410	polrmt	97	46.408	Seriola_dumerili
ENSRNOG00000024879	Polrmt	97	46.154	ENSSLDG00000010643	polrmt	97	46.491	Seriola_lalandi_dorsalis
ENSRNOG00000024879	Polrmt	88	51.208	ENSSPAG00000018740	polrmt	83	51.208	Stegastes_partitus
ENSRNOG00000024879	Polrmt	100	65.989	ENSSSCG00000035693	POLRMT	100	66.018	Sus_scrofa
ENSRNOG00000024879	Polrmt	81	54.898	ENSTGUG00000000621	POLRMT	100	55.102	Taeniopygia_guttata
ENSRNOG00000024879	Polrmt	96	45.455	ENSTRUG00000018040	polrmt	94	46.287	Takifugu_rubripes
ENSRNOG00000024879	Polrmt	84	51.816	ENSTNIG00000010642	polrmt	100	51.816	Tetraodon_nigroviridis
ENSRNOG00000024879	Polrmt	53	68.025	ENSTBEG00000001819	-	100	68.025	Tupaia_belangeri
ENSRNOG00000024879	Polrmt	66	78.588	ENSTTRG00000011329	POLRMT	65	78.588	Tursiops_truncatus
ENSRNOG00000024879	Polrmt	100	66.044	ENSUAMG00000019616	POLRMT	100	66.125	Ursus_americanus
ENSRNOG00000024879	Polrmt	97	62.026	ENSVVUG00000022627	POLRMT	100	62.160	Vulpes_vulpes
ENSRNOG00000024879	Polrmt	97	48.997	ENSXETG00000006545	polrmt	97	48.997	Xenopus_tropicalis
ENSRNOG00000024879	Polrmt	97	45.622	ENSXMAG00000012464	polrmt	98	45.622	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001018	mitochondrial promoter sequence-specific DNA binding	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	ISO	Function
GO:0005739	mitochondrion	-	ISO	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0006390	mitochondrial transcription	21873635.	IBA	Process
GO:0006390	mitochondrial transcription	-	ISO	Process
GO:0032991	protein-containing complex	-	ISO	Component
GO:0034245	mitochondrial DNA-directed RNA polymerase complex	21873635.	IBA	Component
GO:0042645	mitochondrial nucleoid	-	IEA	Component
GO:0042645	mitochondrial nucleoid	-	ISO	Component
GO:0043565	sequence-specific DNA binding	-	IEA	Function
GO:0043565	sequence-specific DNA binding	-	ISO	Function