EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000025142 (Gene tree)
Gene ID: 308790
Gene Symbol: Mex3b
Alias: LOC308790|Rkhd3
Full Name: mex-3 RNA binding family member B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 4225 bases
Position: chr1:144831523-144835747
Accession: 1306790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000036408	KH_1	PF00013.29	5.9e-26	1	2
ENSRNOP00000036408	KH_1	PF00013.29	5.9e-26	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000039748	-	3390	-	ENSRNOP00000036408	576 (aa)	-	D3ZFL6

Gene Model

Click here to download ENSRNOG00000025142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000025142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000025142	Mex3b	89	58.824	ENSRNOG00000015777	Mex3c	94	57.843
ENSRNOG00000025142	Mex3b	53	82.143	ENSRNOG00000058654	AC119762.3	62	79.032

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000025142	Mex3b	100	96.014	ENSG00000183496	MEX3B	100	96.014	Homo_sapiens
ENSRNOG00000025142	Mex3b	100	67.114	ENSAPOG00000006457	mex3b	100	67.002	Acanthochromis_polyacanthus
ENSRNOG00000025142	Mex3b	95	89.397	ENSAMEG00000006037	MEX3B	100	89.397	Ailuropoda_melanoleuca
ENSRNOG00000025142	Mex3b	58	83.251	ENSACIG00000005655	-	64	84.772	Amphilophus_citrinellus
ENSRNOG00000025142	Mex3b	100	63.993	ENSACIG00000017783	mex3b	100	62.628	Amphilophus_citrinellus
ENSRNOG00000025142	Mex3b	100	67.114	ENSAOCG00000023903	mex3b	100	66.834	Amphiprion_ocellaris
ENSRNOG00000025142	Mex3b	100	67.114	ENSAPEG00000000263	mex3b	100	66.834	Amphiprion_percula
ENSRNOG00000025142	Mex3b	89	50.000	ENSATEG00000015187	-	71	80.741	Anabas_testudineus
ENSRNOG00000025142	Mex3b	100	67.343	ENSATEG00000012352	mex3b	100	66.047	Anabas_testudineus
ENSRNOG00000025142	Mex3b	85	63.230	ENSACAG00000011072	MEX3B	100	63.230	Anolis_carolinensis
ENSRNOG00000025142	Mex3b	100	97.049	ENSANAG00000027164	MEX3B	100	97.049	Aotus_nancymaae
ENSRNOG00000025142	Mex3b	100	67.002	ENSACLG00000025776	mex3b	100	66.498	Astatotilapia_calliptera
ENSRNOG00000025142	Mex3b	100	69.024	ENSAMXG00000033615	mex3b	100	68.136	Astyanax_mexicanus
ENSRNOG00000025142	Mex3b	100	92.190	ENSBTAG00000052904	MEX3B	100	92.869	Bos_taurus
ENSRNOG00000025142	Mex3b	100	95.230	ENSCJAG00000008043	MEX3B	100	95.230	Callithrix_jacchus
ENSRNOG00000025142	Mex3b	100	94.792	ENSCAFG00000013759	MEX3B	100	94.792	Canis_familiaris
ENSRNOG00000025142	Mex3b	100	95.181	ENSCAFG00020015832	MEX3B	100	95.353	Canis_lupus_dingo
ENSRNOG00000025142	Mex3b	100	91.638	ENSCHIG00000019863	MEX3B	100	92.150	Capra_hircus
ENSRNOG00000025142	Mex3b	85	97.308	ENSTSYG00000025636	MEX3B	92	97.308	Carlito_syrichta
ENSRNOG00000025142	Mex3b	66	94.118	ENSCAPG00000017918	MEX3B	84	94.118	Cavia_aperea
ENSRNOG00000025142	Mex3b	100	76.599	ENSCPOG00000008241	MEX3B	97	91.379	Cavia_porcellus
ENSRNOG00000025142	Mex3b	100	93.489	ENSCCAG00000001259	MEX3B	100	93.489	Cebus_capucinus
ENSRNOG00000025142	Mex3b	100	96.528	ENSCATG00000030784	MEX3B	100	96.528	Cercocebus_atys
ENSRNOG00000025142	Mex3b	94	95.956	ENSCLAG00000009451	MEX3B	100	95.221	Chinchilla_lanigera
ENSRNOG00000025142	Mex3b	100	96.701	ENSCSAG00000015153	MEX3B	100	96.701	Chlorocebus_sabaeus
ENSRNOG00000025142	Mex3b	100	75.717	ENSCPBG00000007809	MEX3B	100	75.548	Chrysemys_picta_bellii
ENSRNOG00000025142	Mex3b	96	96.751	ENSCANG00000034524	MEX3B	98	96.539	Colobus_angolensis_palliatus
ENSRNOG00000025142	Mex3b	100	98.785	ENSCGRG00001016198	Mex3b	100	98.785	Cricetulus_griseus_chok1gshd
ENSRNOG00000025142	Mex3b	85	98.758	ENSCGRG00000018461	Mex3b	100	98.758	Cricetulus_griseus_crigri
ENSRNOG00000025142	Mex3b	100	62.290	ENSCSEG00000005852	mex3b	95	60.935	Cynoglossus_semilaevis
ENSRNOG00000025142	Mex3b	51	65.462	ENSCSEG00000011533	-	53	73.786	Cynoglossus_semilaevis
ENSRNOG00000025142	Mex3b	100	70.101	ENSDARG00000058369	mex3b	100	68.591	Danio_rerio
ENSRNOG00000025142	Mex3b	100	93.761	ENSDNOG00000043628	MEX3B	100	93.761	Dasypus_novemcinctus
ENSRNOG00000025142	Mex3b	100	52.194	ENSEBUG00000013015	mex3b	100	52.280	Eptatretus_burgeri
ENSRNOG00000025142	Mex3b	100	52.525	ENSEBUG00000007080	mex3b	100	49.007	Eptatretus_burgeri
ENSRNOG00000025142	Mex3b	100	94.655	ENSEASG00005007105	MEX3B	100	94.483	Equus_asinus_asinus
ENSRNOG00000025142	Mex3b	100	92.475	ENSECAG00000013497	MEX3B	100	92.475	Equus_caballus
ENSRNOG00000025142	Mex3b	100	66.502	ENSELUG00000002503	mex3b	100	66.944	Esox_lucius
ENSRNOG00000025142	Mex3b	100	95.675	ENSFCAG00000037513	MEX3B	100	95.502	Felis_catus
ENSRNOG00000025142	Mex3b	76	86.207	ENSFALG00000011102	MEX3B	72	86.777	Ficedula_albicollis
ENSRNOG00000025142	Mex3b	70	97.411	ENSFDAG00000018452	MEX3B	100	97.411	Fukomys_damarensis
ENSRNOG00000025142	Mex3b	70	68.327	ENSFHEG00000022740	-	84	67.143	Fundulus_heteroclitus
ENSRNOG00000025142	Mex3b	50	82.558	ENSGMOG00000016534	mex3b	52	82.171	Gadus_morhua
ENSRNOG00000025142	Mex3b	89	74.383	ENSGALG00000032984	MEX3B	92	77.290	Gallus_gallus
ENSRNOG00000025142	Mex3b	100	56.304	ENSGACG00000012530	mex3b	97	57.593	Gasterosteus_aculeatus
ENSRNOG00000025142	Mex3b	100	76.020	ENSGAGG00000022839	MEX3B	100	77.041	Gopherus_agassizii
ENSRNOG00000025142	Mex3b	99	95.979	ENSGGOG00000000597	MEX3B	100	95.979	Gorilla_gorilla
ENSRNOG00000025142	Mex3b	100	67.169	ENSHBUG00000022683	mex3b	100	66.667	Haplochromis_burtoni
ENSRNOG00000025142	Mex3b	100	95.660	ENSHGLG00000012504	MEX3B	100	95.660	Heterocephalus_glaber_female
ENSRNOG00000025142	Mex3b	95	96.154	ENSHGLG00100008208	MEX3B	100	96.154	Heterocephalus_glaber_male
ENSRNOG00000025142	Mex3b	69	56.397	ENSHCOG00000010812	-	50	84.848	Hippocampus_comes
ENSRNOG00000025142	Mex3b	100	59.864	ENSHCOG00000007290	mex3b	100	60.342	Hippocampus_comes
ENSRNOG00000025142	Mex3b	100	66.892	ENSIPUG00000023356	mex3b	100	66.553	Ictalurus_punctatus
ENSRNOG00000025142	Mex3b	95	97.628	ENSSTOG00000006738	MEX3B	90	97.610	Ictidomys_tridecemlineatus
ENSRNOG00000025142	Mex3b	100	96.718	ENSJJAG00000015411	Mex3b	100	96.718	Jaculus_jaculus
ENSRNOG00000025142	Mex3b	89	64.176	ENSLBEG00000015131	mex3b	95	62.667	Labrus_bergylta
ENSRNOG00000025142	Mex3b	100	73.514	ENSLACG00000015887	MEX3B	100	73.345	Latimeria_chalumnae
ENSRNOG00000025142	Mex3b	100	71.405	ENSLOCG00000012858	mex3b	100	70.401	Lepisosteus_oculatus
ENSRNOG00000025142	Mex3b	100	92.346	ENSLAFG00000006027	MEX3B	95	100.000	Loxodonta_africana
ENSRNOG00000025142	Mex3b	100	96.528	ENSMFAG00000037608	MEX3B	100	96.528	Macaca_fascicularis
ENSRNOG00000025142	Mex3b	100	94.719	ENSMMUG00000018639	MEX3B	100	94.549	Macaca_mulatta
ENSRNOG00000025142	Mex3b	100	96.875	ENSMNEG00000043420	MEX3B	100	96.875	Macaca_nemestrina
ENSRNOG00000025142	Mex3b	95	97.450	ENSMLEG00000037832	MEX3B	99	97.450	Mandrillus_leucophaeus
ENSRNOG00000025142	Mex3b	100	68.456	ENSMAMG00000011325	mex3b	100	67.450	Mastacembelus_armatus
ENSRNOG00000025142	Mex3b	100	67.169	ENSMZEG00005003082	mex3b	100	67.172	Maylandia_zebra
ENSRNOG00000025142	Mex3b	100	98.264	ENSMAUG00000001211	Mex3b	100	98.264	Mesocricetus_auratus
ENSRNOG00000025142	Mex3b	100	93.934	ENSMICG00000043733	MEX3B	100	94.801	Microcebus_murinus
ENSRNOG00000025142	Mex3b	100	98.090	ENSMOCG00000019726	Mex3b	100	98.090	Microtus_ochrogaster
ENSRNOG00000025142	Mex3b	70	69.565	ENSMMOG00000000120	-	69	83.495	Mola_mola
ENSRNOG00000025142	Mex3b	100	62.563	ENSMMOG00000015373	mex3b	98	61.111	Mola_mola
ENSRNOG00000025142	Mex3b	100	88.814	ENSMODG00000019387	MEX3B	100	88.983	Monodelphis_domestica
ENSRNOG00000025142	Mex3b	100	65.604	ENSMALG00000010929	mex3b	77	65.494	Monopterus_albus
ENSRNOG00000025142	Mex3b	100	99.133	MGP_CAROLIEiJ_G0029937	Mex3b	100	99.133	Mus_caroli
ENSRNOG00000025142	Mex3b	100	99.479	ENSMUSG00000057706	Mex3b	100	99.479	Mus_musculus
ENSRNOG00000025142	Mex3b	100	99.479	MGP_PahariEiJ_G0013158	Mex3b	100	99.479	Mus_pahari
ENSRNOG00000025142	Mex3b	100	99.306	MGP_SPRETEiJ_G0031039	Mex3b	100	99.306	Mus_spretus
ENSRNOG00000025142	Mex3b	100	95.833	ENSMPUG00000015493	MEX3B	100	95.833	Mustela_putorius_furo
ENSRNOG00000025142	Mex3b	100	96.886	ENSNGAG00000010102	Mex3b	100	96.886	Nannospalax_galili
ENSRNOG00000025142	Mex3b	100	67.169	ENSNBRG00000000526	mex3b	98	67.172	Neolamprologus_brichardi
ENSRNOG00000025142	Mex3b	69	71.269	ENSNBRG00000012485	-	65	84.772	Neolamprologus_brichardi
ENSRNOG00000025142	Mex3b	100	93.686	ENSNLEG00000036285	MEX3B	100	93.934	Nomascus_leucogenys
ENSRNOG00000025142	Mex3b	86	87.903	ENSMEUG00000002402	MEX3B	95	88.508	Notamacropus_eugenii
ENSRNOG00000025142	Mex3b	92	83.490	ENSOPRG00000009604	MEX3B	100	84.240	Ochotona_princeps
ENSRNOG00000025142	Mex3b	100	94.792	ENSODEG00000015600	MEX3B	100	94.097	Octodon_degus
ENSRNOG00000025142	Mex3b	88	51.631	ENSONIG00000015037	-	63	84.772	Oreochromis_niloticus
ENSRNOG00000025142	Mex3b	100	67.169	ENSONIG00000003391	mex3b	100	66.498	Oreochromis_niloticus
ENSRNOG00000025142	Mex3b	100	78.982	ENSOCUG00000011603	MEX3B	100	78.818	Oryctolagus_cuniculus
ENSRNOG00000025142	Mex3b	70	65.232	ENSORLG00020020174	-	50	80.476	Oryzias_latipes_hni
ENSRNOG00000025142	Mex3b	70	64.667	ENSORLG00015008649	-	50	80.476	Oryzias_latipes_hsok
ENSRNOG00000025142	Mex3b	100	96.028	ENSOGAG00000029664	MEX3B	100	95.682	Otolemur_garnettii
ENSRNOG00000025142	Mex3b	69	88.333	ENSOARG00000014515	MEX3B	92	92.793	Ovis_aries
ENSRNOG00000025142	Mex3b	99	95.979	ENSPPAG00000020407	MEX3B	99	96.964	Pan_paniscus
ENSRNOG00000025142	Mex3b	100	96.534	ENSPTRG00000007373	MEX3B	100	96.534	Pan_troglodytes
ENSRNOG00000025142	Mex3b	100	96.181	ENSPANG00000015634	MEX3B	100	96.181	Papio_anubis
ENSRNOG00000025142	Mex3b	100	64.346	ENSPKIG00000019969	-	100	63.837	Paramormyrops_kingsleyae
ENSRNOG00000025142	Mex3b	100	67.763	ENSPKIG00000018385	mex3b	100	67.603	Paramormyrops_kingsleyae
ENSRNOG00000025142	Mex3b	100	72.034	ENSPSIG00000007979	MEX3B	100	71.743	Pelodiscus_sinensis
ENSRNOG00000025142	Mex3b	57	84.264	ENSPMGG00000017559	-	64	84.264	Periophthalmus_magnuspinnatus
ENSRNOG00000025142	Mex3b	94	69.162	ENSPMGG00000015808	mex3b	100	65.494	Periophthalmus_magnuspinnatus
ENSRNOG00000025142	Mex3b	94	45.194	ENSPMAG00000000125	mex3b	99	43.407	Petromyzon_marinus
ENSRNOG00000025142	Mex3b	69	69.742	ENSPLAG00000002303	-	81	68.773	Poecilia_latipinna
ENSRNOG00000025142	Mex3b	69	70.111	ENSPMEG00000006448	-	81	69.145	Poecilia_mexicana
ENSRNOG00000025142	Mex3b	73	95.962	ENSPPYG00000006723	-	74	95.178	Pongo_abelii
ENSRNOG00000025142	Mex3b	85	95.859	ENSPCAG00000014150	MEX3B	100	95.445	Procavia_capensis
ENSRNOG00000025142	Mex3b	100	96.354	ENSPCOG00000019807	MEX3B	100	96.354	Propithecus_coquereli
ENSRNOG00000025142	Mex3b	100	95.660	ENSPVAG00000000093	MEX3B	100	95.660	Pteropus_vampyrus
ENSRNOG00000025142	Mex3b	95	69.258	ENSPNYG00000019384	mex3b	95	69.217	Pundamilia_nyererei
ENSRNOG00000025142	Mex3b	100	68.971	ENSPNAG00000002109	mex3b	93	84.982	Pygocentrus_nattereri
ENSRNOG00000025142	Mex3b	100	95.660	ENSRBIG00000033099	MEX3B	100	95.660	Rhinopithecus_bieti
ENSRNOG00000025142	Mex3b	100	95.660	ENSRROG00000041868	MEX3B	100	95.660	Rhinopithecus_roxellana
ENSRNOG00000025142	Mex3b	88	97.024	ENSSBOG00000031708	MEX3B	100	97.024	Saimiri_boliviensis_boliviensis
ENSRNOG00000025142	Mex3b	94	66.912	ENSSFOG00015016308	mex3b	84	86.824	Scleropages_formosus
ENSRNOG00000025142	Mex3b	100	64.570	ENSSFOG00015016667	mex3b	100	65.058	Scleropages_formosus
ENSRNOG00000025142	Mex3b	100	66.443	ENSSMAG00000017078	mex3b	100	66.164	Scophthalmus_maximus
ENSRNOG00000025142	Mex3b	90	50.178	ENSSDUG00000022255	-	52	82.381	Seriola_dumerili
ENSRNOG00000025142	Mex3b	100	67.893	ENSSDUG00000013254	mex3b	100	67.395	Seriola_dumerili
ENSRNOG00000025142	Mex3b	100	67.893	ENSSLDG00000014620	mex3b	100	67.395	Seriola_lalandi_dorsalis
ENSRNOG00000025142	Mex3b	85	73.913	ENSSARG00000006007	MEX3B	100	73.913	Sorex_araneus
ENSRNOG00000025142	Mex3b	100	67.785	ENSSPAG00000011854	mex3b	100	67.672	Stegastes_partitus
ENSRNOG00000025142	Mex3b	100	96.886	ENSSSCG00000038491	MEX3B	100	96.886	Sus_scrofa
ENSRNOG00000025142	Mex3b	93	65.392	ENSTRUG00000000367	mex3b	98	63.570	Takifugu_rubripes
ENSRNOG00000025142	Mex3b	100	65.812	ENSTNIG00000003398	mex3b	100	62.712	Tetraodon_nigroviridis
ENSRNOG00000025142	Mex3b	100	92.977	ENSUAMG00000019302	MEX3B	100	92.809	Ursus_americanus
ENSRNOG00000025142	Mex3b	91	94.455	ENSVVUG00000004955	MEX3B	84	95.183	Vulpes_vulpes
ENSRNOG00000025142	Mex3b	100	69.468	ENSXETG00000027601	mex3b	100	69.416	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0022409	positive regulation of cell-cell adhesion	-	ISO	Process
GO:0032794	GTPase activating protein binding	-	ISO	Function
GO:0043547	positive regulation of GTPase activity	-	ISO	Process
GO:0050766	positive regulation of phagocytosis	-	ISO	Process
GO:0072697	protein localization to cell cortex	-	ISO	Process