EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000025310 (Gene tree)
Gene ID: 288564
Gene Symbol: Pop7
Alias: LOC288564|Rpp20
Full Name: POP7 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 1042 bases
Position: chr12:22259713-22260754
Accession: 1306413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001913	Alba	PF01918.21	2.2e-09	1	1
ENSRNOP00000001913	Rpp20	PF12328.8	3.2e-20	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001913	-	843	-	ENSRNOP00000001913	140 (aa)	-	D3ZQJ2

Gene Model

Click here to download ENSRNOG00000025310's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000025310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000025310	Pop7	100	96.429	ENSG00000172336	POP7	100	96.429	Homo_sapiens
ENSRNOG00000025310	Pop7	91	72.093	ENSAPOG00000015722	pop7	100	66.197	Acanthochromis_polyacanthus
ENSRNOG00000025310	Pop7	94	69.925	ENSACIG00000022071	pop7	93	72.180	Amphilophus_citrinellus
ENSRNOG00000025310	Pop7	91	72.093	ENSAOCG00000021222	pop7	82	72.093	Amphiprion_ocellaris
ENSRNOG00000025310	Pop7	91	72.093	ENSAPEG00000018819	pop7	82	72.093	Amphiprion_percula
ENSRNOG00000025310	Pop7	96	69.343	ENSATEG00000017615	pop7	88	69.343	Anabas_testudineus
ENSRNOG00000025310	Pop7	100	95.714	ENSANAG00000019054	POP7	100	95.714	Aotus_nancymaae
ENSRNOG00000025310	Pop7	87	74.194	ENSACLG00000018898	pop7	79	74.194	Astatotilapia_calliptera
ENSRNOG00000025310	Pop7	86	76.423	ENSAMXG00000025789	pop7	84	76.423	Astyanax_mexicanus
ENSRNOG00000025310	Pop7	100	95.714	ENSCJAG00000015056	POP7	100	95.714	Callithrix_jacchus
ENSRNOG00000025310	Pop7	100	96.429	ENSCAFG00000014205	POP7	100	96.429	Canis_familiaris
ENSRNOG00000025310	Pop7	100	96.429	ENSCAFG00020013863	POP7	100	96.429	Canis_lupus_dingo
ENSRNOG00000025310	Pop7	100	97.143	ENSCHIG00000013484	POP7	100	97.143	Capra_hircus
ENSRNOG00000025310	Pop7	100	95.000	ENSTSYG00000035016	POP7	100	95.000	Carlito_syrichta
ENSRNOG00000025310	Pop7	100	97.143	ENSCPOG00000005767	POP7	100	97.143	Cavia_porcellus
ENSRNOG00000025310	Pop7	100	95.714	ENSCCAG00000008898	POP7	100	95.714	Cebus_capucinus
ENSRNOG00000025310	Pop7	100	95.714	ENSCATG00000010371	POP7	100	95.714	Cercocebus_atys
ENSRNOG00000025310	Pop7	100	97.143	ENSCLAG00000001541	POP7	100	97.143	Chinchilla_lanigera
ENSRNOG00000025310	Pop7	100	95.714	ENSCSAG00000017937	POP7	100	95.714	Chlorocebus_sabaeus
ENSRNOG00000025310	Pop7	100	96.429	ENSCANG00000000652	POP7	100	96.429	Colobus_angolensis_palliatus
ENSRNOG00000025310	Pop7	100	96.429	ENSCGRG00001010593	Pop7	100	96.429	Cricetulus_griseus_chok1gshd
ENSRNOG00000025310	Pop7	100	96.429	ENSCGRG00000019940	Pop7	100	96.429	Cricetulus_griseus_crigri
ENSRNOG00000025310	Pop7	91	72.093	ENSCSEG00000013197	pop7	96	72.093	Cynoglossus_semilaevis
ENSRNOG00000025310	Pop7	91	71.318	ENSCVAG00000016728	pop7	82	71.318	Cyprinodon_variegatus
ENSRNOG00000025310	Pop7	90	71.094	ENSDARG00000036394	pop7	82	71.094	Danio_rerio
ENSRNOG00000025310	Pop7	100	97.143	ENSDNOG00000031207	POP7	64	97.143	Dasypus_novemcinctus
ENSRNOG00000025310	Pop7	100	95.714	ENSDORG00000012512	Pop7	100	95.714	Dipodomys_ordii
ENSRNOG00000025310	Pop7	79	43.966	FBgn0066304	Rpp20	66	43.966	Drosophila_melanogaster
ENSRNOG00000025310	Pop7	100	92.857	ENSETEG00000007941	POP7	100	92.857	Echinops_telfairi
ENSRNOG00000025310	Pop7	100	97.143	ENSEASG00005016994	POP7	100	97.143	Equus_asinus_asinus
ENSRNOG00000025310	Pop7	100	97.143	ENSECAG00000010383	POP7	100	97.143	Equus_caballus
ENSRNOG00000025310	Pop7	83	70.339	ENSELUG00000023947	pop7	88	70.339	Esox_lucius
ENSRNOG00000025310	Pop7	100	96.429	ENSFCAG00000006849	POP7	100	96.429	Felis_catus
ENSRNOG00000025310	Pop7	100	97.857	ENSFDAG00000018839	POP7	100	97.857	Fukomys_damarensis
ENSRNOG00000025310	Pop7	91	72.093	ENSFHEG00000012595	pop7	82	72.093	Fundulus_heteroclitus
ENSRNOG00000025310	Pop7	91	72.093	ENSGAFG00000017633	pop7	82	72.093	Gambusia_affinis
ENSRNOG00000025310	Pop7	88	74.400	ENSGACG00000019931	pop7	79	74.400	Gasterosteus_aculeatus
ENSRNOG00000025310	Pop7	100	96.429	ENSGGOG00000016492	POP7	100	96.429	Gorilla_gorilla
ENSRNOG00000025310	Pop7	87	70.968	ENSHBUG00000011987	pop7	90	70.968	Haplochromis_burtoni
ENSRNOG00000025310	Pop7	100	96.429	ENSHGLG00000018118	POP7	100	96.429	Heterocephalus_glaber_female
ENSRNOG00000025310	Pop7	100	96.429	ENSHGLG00100007908	POP7	100	96.429	Heterocephalus_glaber_male
ENSRNOG00000025310	Pop7	90	73.438	ENSHCOG00000010137	pop7	82	73.438	Hippocampus_comes
ENSRNOG00000025310	Pop7	87	73.387	ENSIPUG00000000411	pop7	79	73.387	Ictalurus_punctatus
ENSRNOG00000025310	Pop7	100	97.857	ENSSTOG00000030883	POP7	100	97.857	Ictidomys_tridecemlineatus
ENSRNOG00000025310	Pop7	100	97.143	ENSJJAG00000003989	Pop7	100	97.143	Jaculus_jaculus
ENSRNOG00000025310	Pop7	91	72.093	ENSKMAG00000010696	pop7	82	72.093	Kryptolebias_marmoratus
ENSRNOG00000025310	Pop7	91	72.308	ENSLBEG00000003483	pop7	89	72.308	Labrus_bergylta
ENSRNOG00000025310	Pop7	86	73.387	ENSLBEG00000008621	pop7	77	73.387	Labrus_bergylta
ENSRNOG00000025310	Pop7	100	72.603	ENSLACG00000010203	POP7	100	72.603	Latimeria_chalumnae
ENSRNOG00000025310	Pop7	91	74.219	ENSLOCG00000017553	pop7	83	76.562	Lepisosteus_oculatus
ENSRNOG00000025310	Pop7	100	92.143	ENSLAFG00000030032	POP7	100	92.143	Loxodonta_africana
ENSRNOG00000025310	Pop7	100	95.714	ENSMFAG00000027783	POP7	100	95.714	Macaca_fascicularis
ENSRNOG00000025310	Pop7	100	95.714	ENSMMUG00000008581	POP7	100	95.714	Macaca_mulatta
ENSRNOG00000025310	Pop7	100	95.714	ENSMNEG00000037495	POP7	100	95.714	Macaca_nemestrina
ENSRNOG00000025310	Pop7	100	95.714	ENSMLEG00000027597	POP7	100	95.714	Mandrillus_leucophaeus
ENSRNOG00000025310	Pop7	99	69.286	ENSMAMG00000007258	pop7	96	69.286	Mastacembelus_armatus
ENSRNOG00000025310	Pop7	95	71.111	ENSMZEG00005022194	-	88	71.111	Maylandia_zebra
ENSRNOG00000025310	Pop7	87	70.968	ENSMZEG00005005138	pop7	90	70.968	Maylandia_zebra
ENSRNOG00000025310	Pop7	100	92.143	ENSMAUG00000015820	Pop7	100	92.143	Mesocricetus_auratus
ENSRNOG00000025310	Pop7	100	97.857	ENSMICG00000009398	POP7	100	97.857	Microcebus_murinus
ENSRNOG00000025310	Pop7	100	98.571	ENSMOCG00000013694	Pop7	100	98.571	Microtus_ochrogaster
ENSRNOG00000025310	Pop7	91	69.767	ENSMMOG00000014095	pop7	90	72.093	Mola_mola
ENSRNOG00000025310	Pop7	100	87.324	ENSMODG00000023662	POP7	100	90.141	Monodelphis_domestica
ENSRNOG00000025310	Pop7	87	74.194	ENSMALG00000011180	pop7	92	74.194	Monopterus_albus
ENSRNOG00000025310	Pop7	100	98.571	MGP_CAROLIEiJ_G0027876	Pop7	100	98.571	Mus_caroli
ENSRNOG00000025310	Pop7	100	98.571	ENSMUSG00000029715	Pop7	100	98.571	Mus_musculus
ENSRNOG00000025310	Pop7	100	97.857	MGP_PahariEiJ_G0024462	Pop7	100	97.857	Mus_pahari
ENSRNOG00000025310	Pop7	100	98.571	MGP_SPRETEiJ_G0028881	Pop7	100	98.571	Mus_spretus
ENSRNOG00000025310	Pop7	100	95.714	ENSMPUG00000019765	POP7	100	95.714	Mustela_putorius_furo
ENSRNOG00000025310	Pop7	100	95.000	ENSMLUG00000010110	POP7	100	95.000	Myotis_lucifugus
ENSRNOG00000025310	Pop7	100	96.429	ENSNGAG00000021630	Pop7	100	96.429	Nannospalax_galili
ENSRNOG00000025310	Pop7	87	73.387	ENSNBRG00000006286	pop7	87	73.387	Neolamprologus_brichardi
ENSRNOG00000025310	Pop7	100	96.429	ENSNLEG00000011939	POP7	100	96.429	Nomascus_leucogenys
ENSRNOG00000025310	Pop7	54	96.000	ENSOPRG00000015185	POP7	100	96.000	Ochotona_princeps
ENSRNOG00000025310	Pop7	100	97.143	ENSODEG00000020363	POP7	100	97.143	Octodon_degus
ENSRNOG00000025310	Pop7	100	83.571	ENSOANG00000001658	POP7	100	83.571	Ornithorhynchus_anatinus
ENSRNOG00000025310	Pop7	100	97.143	ENSOCUG00000007818	POP7	100	97.143	Oryctolagus_cuniculus
ENSRNOG00000025310	Pop7	89	74.803	ENSORLG00000003594	pop7	88	74.803	Oryzias_latipes
ENSRNOG00000025310	Pop7	94	73.684	ENSORLG00020017530	pop7	79	73.684	Oryzias_latipes_hni
ENSRNOG00000025310	Pop7	99	70.423	ENSORLG00015015310	pop7	100	70.423	Oryzias_latipes_hsok
ENSRNOG00000025310	Pop7	88	76.800	ENSOMEG00000003667	pop7	81	76.800	Oryzias_melastigma
ENSRNOG00000025310	Pop7	100	96.429	ENSOGAG00000009340	POP7	100	96.429	Otolemur_garnettii
ENSRNOG00000025310	Pop7	100	96.429	ENSPPAG00000015339	POP7	100	96.429	Pan_paniscus
ENSRNOG00000025310	Pop7	100	96.429	ENSPPRG00000018408	POP7	100	96.429	Panthera_pardus
ENSRNOG00000025310	Pop7	100	96.429	ENSPTIG00000005807	POP7	100	96.429	Panthera_tigris_altaica
ENSRNOG00000025310	Pop7	100	96.429	ENSPTRG00000019504	POP7	100	96.429	Pan_troglodytes
ENSRNOG00000025310	Pop7	100	96.429	ENSPTRG00000047460	-	100	96.429	Pan_troglodytes
ENSRNOG00000025310	Pop7	100	95.714	ENSPANG00000006196	POP7	100	95.714	Papio_anubis
ENSRNOG00000025310	Pop7	94	71.429	ENSPKIG00000019869	pop7	76	72.180	Paramormyrops_kingsleyae
ENSRNOG00000025310	Pop7	75	71.028	ENSPSIG00000000415	POP7	92	71.545	Pelodiscus_sinensis
ENSRNOG00000025310	Pop7	96	70.073	ENSPMGG00000011142	pop7	96	70.073	Periophthalmus_magnuspinnatus
ENSRNOG00000025310	Pop7	100	98.571	ENSPEMG00000011583	Pop7	100	98.571	Peromyscus_maniculatus_bairdii
ENSRNOG00000025310	Pop7	100	87.324	ENSPCIG00000000517	POP7	72	88.732	Phascolarctos_cinereus
ENSRNOG00000025310	Pop7	91	72.093	ENSPFOG00000019976	pop7	82	72.093	Poecilia_formosa
ENSRNOG00000025310	Pop7	91	72.093	ENSPLAG00000007700	pop7	82	72.093	Poecilia_latipinna
ENSRNOG00000025310	Pop7	91	72.093	ENSPMEG00000010673	pop7	82	72.093	Poecilia_mexicana
ENSRNOG00000025310	Pop7	91	72.093	ENSPREG00000015137	pop7	82	72.093	Poecilia_reticulata
ENSRNOG00000025310	Pop7	100	96.429	ENSPPYG00000017426	POP7	100	96.429	Pongo_abelii
ENSRNOG00000025310	Pop7	100	92.857	ENSPCAG00000010445	POP7	100	92.857	Procavia_capensis
ENSRNOG00000025310	Pop7	85	90.756	ENSPCOG00000018009	-	88	90.756	Propithecus_coquereli
ENSRNOG00000025310	Pop7	100	97.857	ENSPCOG00000009302	POP7	100	97.857	Propithecus_coquereli
ENSRNOG00000025310	Pop7	87	70.968	ENSPNYG00000000975	pop7	90	70.968	Pundamilia_nyererei
ENSRNOG00000025310	Pop7	87	70.968	ENSPNAG00000007206	pop7	86	73.387	Pygocentrus_nattereri
ENSRNOG00000025310	Pop7	100	96.429	ENSRBIG00000002671	POP7	100	96.429	Rhinopithecus_bieti
ENSRNOG00000025310	Pop7	100	97.143	ENSRROG00000028543	POP7	100	97.143	Rhinopithecus_roxellana
ENSRNOG00000025310	Pop7	100	94.286	ENSSBOG00000005173	POP7	100	94.286	Saimiri_boliviensis_boliviensis
ENSRNOG00000025310	Pop7	100	87.324	ENSSHAG00000001026	POP7	100	88.732	Sarcophilus_harrisii
ENSRNOG00000025310	Pop7	87	74.797	ENSSFOG00015007957	pop7	82	74.797	Scleropages_formosus
ENSRNOG00000025310	Pop7	99	68.085	ENSSMAG00000015536	pop7	99	68.085	Scophthalmus_maximus
ENSRNOG00000025310	Pop7	99	68.794	ENSSDUG00000022172	pop7	90	68.794	Seriola_dumerili
ENSRNOG00000025310	Pop7	82	69.231	ENSSLDG00000019818	pop7	91	69.231	Seriola_lalandi_dorsalis
ENSRNOG00000025310	Pop7	90	71.875	ENSSPAG00000000652	pop7	76	71.875	Stegastes_partitus
ENSRNOG00000025310	Pop7	100	97.857	ENSSSCG00000007672	POP7	100	97.857	Sus_scrofa
ENSRNOG00000025310	Pop7	99	67.143	ENSTRUG00000024340	-	99	69.286	Takifugu_rubripes
ENSRNOG00000025310	Pop7	93	68.939	ENSTRUG00000023845	pop7	84	71.212	Takifugu_rubripes
ENSRNOG00000025310	Pop7	91	68.992	ENSTNIG00000001259	pop7	82	71.318	Tetraodon_nigroviridis
ENSRNOG00000025310	Pop7	100	97.857	ENSTBEG00000001849	POP7	100	97.857	Tupaia_belangeri
ENSRNOG00000025310	Pop7	100	95.714	ENSTTRG00000011012	POP7	100	95.714	Tursiops_truncatus
ENSRNOG00000025310	Pop7	100	95.714	ENSUAMG00000028076	POP7	100	95.714	Ursus_americanus
ENSRNOG00000025310	Pop7	100	95.714	ENSUMAG00000010895	POP7	100	95.714	Ursus_maritimus
ENSRNOG00000025310	Pop7	100	96.429	ENSVVUG00000023472	POP7	100	96.429	Vulpes_vulpes
ENSRNOG00000025310	Pop7	91	70.543	ENSXCOG00000012016	pop7	81	70.543	Xiphophorus_couchianus
ENSRNOG00000025310	Pop7	91	72.093	ENSXMAG00000019746	pop7	82	72.093	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000172	ribonuclease MRP complex	-	IEA	Component
GO:0000172	ribonuclease MRP complex	-	ISO	Component
GO:0001682	tRNA 5'-leader removal	-	IEA	Process
GO:0001682	tRNA 5'-leader removal	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	-	ISO	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0008033	tRNA processing	21873635.	IBA	Process
GO:0008150	biological_process	-	ND	Process
GO:0030681	multimeric ribonuclease P complex	-	IEA	Component
GO:0030681	multimeric ribonuclease P complex	-	ISO	Component
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process