EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000025317 (Gene tree)
Gene ID: 362685
Gene Symbol: Gpatch11
Alias: Ccdc75|LOC362685|RGD1311424
Full Name: G patch domain containing 11
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 12535 bases
Position: chr6:1410507-1423041
Accession: 1311424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000031805	G-patch	PF01585.23	5e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000034919	-	4002	XM_006239636	ENSRNOP00000031805	260 (aa)	XP_006239698	F1LV52

Gene Model

Click here to download ENSRNOG00000025317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000025317's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000025317	Gpatch11	100	89.615	ENSG00000152133	GPATCH11	98	85.714	Homo_sapiens
ENSRNOG00000025317	Gpatch11	99	55.385	ENSAPOG00000010617	gpatch11	99	56.154	Acanthochromis_polyacanthus
ENSRNOG00000025317	Gpatch11	100	88.846	ENSAMEG00000017542	GPATCH11	98	88.846	Ailuropoda_melanoleuca
ENSRNOG00000025317	Gpatch11	99	56.589	ENSACIG00000007107	gpatch11	99	55.814	Amphilophus_citrinellus
ENSRNOG00000025317	Gpatch11	99	55.385	ENSAOCG00000003421	gpatch11	99	56.538	Amphiprion_ocellaris
ENSRNOG00000025317	Gpatch11	99	55.385	ENSAPEG00000023659	gpatch11	99	56.538	Amphiprion_percula
ENSRNOG00000025317	Gpatch11	99	56.977	ENSATEG00000015556	gpatch11	99	56.977	Anabas_testudineus
ENSRNOG00000025317	Gpatch11	99	69.767	ENSAPLG00000009863	GPATCH11	98	69.767	Anas_platyrhynchos
ENSRNOG00000025317	Gpatch11	100	89.231	ENSANAG00000015896	GPATCH11	91	87.692	Aotus_nancymaae
ENSRNOG00000025317	Gpatch11	99	56.977	ENSACLG00000024037	gpatch11	99	56.977	Astatotilapia_calliptera
ENSRNOG00000025317	Gpatch11	99	54.826	ENSAMXG00000043007	gpatch11	99	53.282	Astyanax_mexicanus
ENSRNOG00000025317	Gpatch11	100	89.615	ENSBTAG00000003861	GPATCH11	98	89.615	Bos_taurus
ENSRNOG00000025317	Gpatch11	100	89.231	ENSCJAG00000003790	GPATCH11	93	87.692	Callithrix_jacchus
ENSRNOG00000025317	Gpatch11	60	88.535	ENSCAFG00000006041	GPATCH11	90	88.535	Canis_familiaris
ENSRNOG00000025317	Gpatch11	100	79.615	ENSCAFG00020022847	GPATCH11	98	79.615	Canis_lupus_dingo
ENSRNOG00000025317	Gpatch11	100	88.077	ENSCHIG00000010173	GPATCH11	100	88.077	Capra_hircus
ENSRNOG00000025317	Gpatch11	100	90.769	ENSTSYG00000004284	GPATCH11	100	90.769	Carlito_syrichta
ENSRNOG00000025317	Gpatch11	100	87.308	ENSCAPG00000009759	GPATCH11	98	87.308	Cavia_aperea
ENSRNOG00000025317	Gpatch11	100	87.308	ENSCPOG00000012194	GPATCH11	98	87.308	Cavia_porcellus
ENSRNOG00000025317	Gpatch11	100	89.231	ENSCCAG00000032499	GPATCH11	91	87.692	Cebus_capucinus
ENSRNOG00000025317	Gpatch11	100	89.231	ENSCATG00000041807	GPATCH11	98	88.462	Cercocebus_atys
ENSRNOG00000025317	Gpatch11	100	90.000	ENSCLAG00000008061	GPATCH11	98	88.462	Chinchilla_lanigera
ENSRNOG00000025317	Gpatch11	100	89.615	ENSCSAG00000012046	GPATCH11	98	88.846	Chlorocebus_sabaeus
ENSRNOG00000025317	Gpatch11	100	87.739	ENSCHOG00000004377	GPATCH11	97	87.356	Choloepus_hoffmanni
ENSRNOG00000025317	Gpatch11	99	73.643	ENSCPBG00000024803	GPATCH11	99	73.643	Chrysemys_picta_bellii
ENSRNOG00000025317	Gpatch11	100	40.530	ENSCSAVG00000005908	-	98	40.000	Ciona_savignyi
ENSRNOG00000025317	Gpatch11	100	78.462	ENSCANG00000039104	GPATCH11	89	78.462	Colobus_angolensis_palliatus
ENSRNOG00000025317	Gpatch11	100	90.000	ENSCGRG00001022189	Gpatch11	98	90.385	Cricetulus_griseus_chok1gshd
ENSRNOG00000025317	Gpatch11	100	90.000	ENSCGRG00000004648	Gpatch11	98	90.385	Cricetulus_griseus_crigri
ENSRNOG00000025317	Gpatch11	99	56.589	ENSCSEG00000012799	gpatch11	99	56.589	Cynoglossus_semilaevis
ENSRNOG00000025317	Gpatch11	99	56.977	ENSCVAG00000014749	gpatch11	99	57.752	Cyprinodon_variegatus
ENSRNOG00000025317	Gpatch11	99	56.977	ENSDARG00000026892	gpatch11	98	56.977	Danio_rerio
ENSRNOG00000025317	Gpatch11	100	87.692	ENSDNOG00000010487	GPATCH11	98	87.692	Dasypus_novemcinctus
ENSRNOG00000025317	Gpatch11	100	87.308	ENSDORG00000002241	Gpatch11	98	87.308	Dipodomys_ordii
ENSRNOG00000025317	Gpatch11	99	36.704	FBgn0037490	CG10053	99	36.704	Drosophila_melanogaster
ENSRNOG00000025317	Gpatch11	100	89.615	ENSEASG00005007368	GPATCH11	98	90.385	Equus_asinus_asinus
ENSRNOG00000025317	Gpatch11	93	88.430	ENSECAG00000013489	GPATCH11	96	89.256	Equus_caballus
ENSRNOG00000025317	Gpatch11	60	93.407	ENSEEUG00000007949	-	62	93.407	Erinaceus_europaeus
ENSRNOG00000025317	Gpatch11	99	57.088	ENSELUG00000018037	gpatch11	98	57.088	Esox_lucius
ENSRNOG00000025317	Gpatch11	100	70.769	ENSFALG00000011877	GPATCH11	100	70.769	Ficedula_albicollis
ENSRNOG00000025317	Gpatch11	100	88.462	ENSFDAG00000001096	GPATCH11	98	87.692	Fukomys_damarensis
ENSRNOG00000025317	Gpatch11	99	55.426	ENSFHEG00000000556	gpatch11	99	55.426	Fundulus_heteroclitus
ENSRNOG00000025317	Gpatch11	55	54.225	ENSGMOG00000018831	gpatch11	95	54.225	Gadus_morhua
ENSRNOG00000025317	Gpatch11	99	69.380	ENSGALG00000010561	GPATCH11	98	69.767	Gallus_gallus
ENSRNOG00000025317	Gpatch11	93	53.306	ENSGAFG00000005308	gpatch11	93	53.441	Gambusia_affinis
ENSRNOG00000025317	Gpatch11	55	56.250	ENSGACG00000004367	gpatch11	95	56.250	Gasterosteus_aculeatus
ENSRNOG00000025317	Gpatch11	100	72.692	ENSGAGG00000002120	GPATCH11	100	73.077	Gopherus_agassizii
ENSRNOG00000025317	Gpatch11	70	88.398	ENSGGOG00000042992	-	97	78.082	Gorilla_gorilla
ENSRNOG00000025317	Gpatch11	97	73.016	ENSGGOG00000005021	-	100	73.016	Gorilla_gorilla
ENSRNOG00000025317	Gpatch11	100	90.385	ENSHGLG00000009502	-	98	89.615	Heterocephalus_glaber_female
ENSRNOG00000025317	Gpatch11	100	81.923	ENSHGLG00000011210	-	100	81.538	Heterocephalus_glaber_female
ENSRNOG00000025317	Gpatch11	99	67.433	ENSHGLG00100005773	-	96	66.667	Heterocephalus_glaber_male
ENSRNOG00000025317	Gpatch11	100	90.385	ENSHGLG00100004989	-	98	89.615	Heterocephalus_glaber_male
ENSRNOG00000025317	Gpatch11	99	55.039	ENSHCOG00000000322	gpatch11	99	54.651	Hippocampus_comes
ENSRNOG00000025317	Gpatch11	99	50.973	ENSIPUG00000018626	gpatch11	98	50.973	Ictalurus_punctatus
ENSRNOG00000025317	Gpatch11	100	89.615	ENSSTOG00000013881	GPATCH11	98	89.615	Ictidomys_tridecemlineatus
ENSRNOG00000025317	Gpatch11	100	76.538	ENSJJAG00000015127	Gpatch11	100	74.905	Jaculus_jaculus
ENSRNOG00000025317	Gpatch11	99	52.326	ENSKMAG00000008333	gpatch11	99	51.938	Kryptolebias_marmoratus
ENSRNOG00000025317	Gpatch11	95	56.911	ENSLBEG00000021651	gpatch11	99	58.025	Labrus_bergylta
ENSRNOG00000025317	Gpatch11	100	63.258	ENSLACG00000008344	GPATCH11	100	64.015	Latimeria_chalumnae
ENSRNOG00000025317	Gpatch11	99	58.301	ENSLOCG00000015919	gpatch11	98	58.366	Lepisosteus_oculatus
ENSRNOG00000025317	Gpatch11	100	88.846	ENSLAFG00000018602	GPATCH11	98	88.846	Loxodonta_africana
ENSRNOG00000025317	Gpatch11	100	89.231	ENSMFAG00000043245	GPATCH11	98	88.462	Macaca_fascicularis
ENSRNOG00000025317	Gpatch11	100	89.231	ENSMMUG00000030867	GPATCH11	93	88.462	Macaca_mulatta
ENSRNOG00000025317	Gpatch11	100	79.231	ENSMNEG00000029239	GPATCH11	92	79.231	Macaca_nemestrina
ENSRNOG00000025317	Gpatch11	100	88.462	ENSMLEG00000043401	GPATCH11	90	88.462	Mandrillus_leucophaeus
ENSRNOG00000025317	Gpatch11	99	55.039	ENSMAMG00000017392	gpatch11	99	55.426	Mastacembelus_armatus
ENSRNOG00000025317	Gpatch11	99	58.140	ENSMZEG00005009727	gpatch11	99	58.140	Maylandia_zebra
ENSRNOG00000025317	Gpatch11	99	69.380	ENSMGAG00000011180	GPATCH11	98	69.380	Meleagris_gallopavo
ENSRNOG00000025317	Gpatch11	100	88.846	ENSMAUG00000018451	Gpatch11	98	88.846	Mesocricetus_auratus
ENSRNOG00000025317	Gpatch11	100	90.769	ENSMICG00000003312	GPATCH11	100	90.769	Microcebus_murinus
ENSRNOG00000025317	Gpatch11	100	79.231	ENSMOCG00000012750	Gpatch11	100	80.000	Microtus_ochrogaster
ENSRNOG00000025317	Gpatch11	99	57.364	ENSMMOG00000000729	gpatch11	99	56.757	Mola_mola
ENSRNOG00000025317	Gpatch11	100	77.308	ENSMODG00000015289	GPATCH11	100	76.538	Monodelphis_domestica
ENSRNOG00000025317	Gpatch11	99	55.426	ENSMALG00000005008	gpatch11	99	55.039	Monopterus_albus
ENSRNOG00000025317	Gpatch11	100	93.893	MGP_CAROLIEiJ_G0021888	Gpatch11	98	93.511	Mus_caroli
ENSRNOG00000025317	Gpatch11	100	95.769	ENSMUSG00000050668	Gpatch11	98	95.769	Mus_musculus
ENSRNOG00000025317	Gpatch11	100	95.000	MGP_SPRETEiJ_G0022801	Gpatch11	98	95.000	Mus_spretus
ENSRNOG00000025317	Gpatch11	100	87.692	ENSMPUG00000010020	GPATCH11	98	87.692	Mustela_putorius_furo
ENSRNOG00000025317	Gpatch11	100	89.231	ENSMLUG00000003506	GPATCH11	98	89.231	Myotis_lucifugus
ENSRNOG00000025317	Gpatch11	99	89.494	ENSNGAG00000002929	Gpatch11	98	89.494	Nannospalax_galili
ENSRNOG00000025317	Gpatch11	99	58.140	ENSNBRG00000019293	gpatch11	99	58.140	Neolamprologus_brichardi
ENSRNOG00000025317	Gpatch11	99	58.140	ENSNBRG00000012291	gpatch11	99	58.140	Neolamprologus_brichardi
ENSRNOG00000025317	Gpatch11	100	69.455	ENSNLEG00000035127	-	92	69.455	Nomascus_leucogenys
ENSRNOG00000025317	Gpatch11	93	77.273	ENSMEUG00000005748	GPATCH11	97	78.099	Notamacropus_eugenii
ENSRNOG00000025317	Gpatch11	100	84.674	ENSOPRG00000008150	GPATCH11	92	83.525	Ochotona_princeps
ENSRNOG00000025317	Gpatch11	100	90.385	ENSODEG00000011404	GPATCH11	98	88.846	Octodon_degus
ENSRNOG00000025317	Gpatch11	99	57.364	ENSONIG00000010082	gpatch11	99	57.364	Oreochromis_niloticus
ENSRNOG00000025317	Gpatch11	100	79.008	ENSOANG00000008080	GPATCH11	100	78.626	Ornithorhynchus_anatinus
ENSRNOG00000025317	Gpatch11	100	88.462	ENSOCUG00000007217	GPATCH11	98	88.462	Oryctolagus_cuniculus
ENSRNOG00000025317	Gpatch11	99	55.814	ENSORLG00000028418	gpatch11	99	55.814	Oryzias_latipes
ENSRNOG00000025317	Gpatch11	99	55.814	ENSORLG00020014127	gpatch11	99	55.814	Oryzias_latipes_hni
ENSRNOG00000025317	Gpatch11	99	55.814	ENSORLG00015023144	gpatch11	99	55.814	Oryzias_latipes_hsok
ENSRNOG00000025317	Gpatch11	99	57.752	ENSOMEG00000019972	gpatch11	99	57.752	Oryzias_melastigma
ENSRNOG00000025317	Gpatch11	100	89.231	ENSOGAG00000001387	GPATCH11	100	89.231	Otolemur_garnettii
ENSRNOG00000025317	Gpatch11	100	87.692	ENSOARG00000009846	GPATCH11	98	87.308	Ovis_aries
ENSRNOG00000025317	Gpatch11	100	89.231	ENSPPAG00000043328	GPATCH11	91	88.462	Pan_paniscus
ENSRNOG00000025317	Gpatch11	100	88.462	ENSPPRG00000003253	GPATCH11	93	88.462	Panthera_pardus
ENSRNOG00000025317	Gpatch11	100	88.462	ENSPTIG00000021056	GPATCH11	93	88.462	Panthera_tigris_altaica
ENSRNOG00000025317	Gpatch11	100	88.846	ENSPTRG00000011832	GPATCH11	91	88.077	Pan_troglodytes
ENSRNOG00000025317	Gpatch11	100	89.231	ENSPANG00000008265	GPATCH11	93	88.462	Papio_anubis
ENSRNOG00000025317	Gpatch11	100	56.870	ENSPKIG00000024060	gpatch11	100	56.439	Paramormyrops_kingsleyae
ENSRNOG00000025317	Gpatch11	100	71.538	ENSPSIG00000018046	GPATCH11	100	71.538	Pelodiscus_sinensis
ENSRNOG00000025317	Gpatch11	99	57.364	ENSPMGG00000001681	gpatch11	99	56.977	Periophthalmus_magnuspinnatus
ENSRNOG00000025317	Gpatch11	99	89.535	ENSPEMG00000011862	Gpatch11	97	90.310	Peromyscus_maniculatus_bairdii
ENSRNOG00000025317	Gpatch11	99	44.402	ENSPMAG00000007966	gpatch11	98	45.174	Petromyzon_marinus
ENSRNOG00000025317	Gpatch11	100	76.336	ENSPCIG00000010983	GPATCH11	100	77.099	Phascolarctos_cinereus
ENSRNOG00000025317	Gpatch11	99	54.962	ENSPFOG00000019450	gpatch11	99	54.789	Poecilia_formosa
ENSRNOG00000025317	Gpatch11	99	55.039	ENSPLAG00000022979	gpatch11	99	55.426	Poecilia_latipinna
ENSRNOG00000025317	Gpatch11	99	55.039	ENSPMEG00000013602	gpatch11	99	55.426	Poecilia_mexicana
ENSRNOG00000025317	Gpatch11	99	54.440	ENSPREG00000007844	gpatch11	99	55.172	Poecilia_reticulata
ENSRNOG00000025317	Gpatch11	100	90.000	ENSPPYG00000012494	GPATCH11	98	89.231	Pongo_abelii
ENSRNOG00000025317	Gpatch11	88	70.435	ENSPCAG00000012983	GPATCH11	82	71.304	Procavia_capensis
ENSRNOG00000025317	Gpatch11	100	91.538	ENSPCOG00000017383	GPATCH11	100	91.538	Propithecus_coquereli
ENSRNOG00000025317	Gpatch11	99	57.364	ENSPNYG00000014257	gpatch11	99	57.364	Pundamilia_nyererei
ENSRNOG00000025317	Gpatch11	99	54.406	ENSPNAG00000000500	gpatch11	99	53.817	Pygocentrus_nattereri
ENSRNOG00000025317	Gpatch11	93	80.579	ENSRBIG00000040541	GPATCH11	91	80.579	Rhinopithecus_bieti
ENSRNOG00000025317	Gpatch11	97	65.613	ENSRROG00000014332	-	100	65.217	Rhinopithecus_roxellana
ENSRNOG00000025317	Gpatch11	100	89.615	ENSRROG00000039341	GPATCH11	98	88.846	Rhinopithecus_roxellana
ENSRNOG00000025317	Gpatch11	100	90.000	ENSSBOG00000029397	GPATCH11	91	88.462	Saimiri_boliviensis_boliviensis
ENSRNOG00000025317	Gpatch11	99	75.769	ENSSHAG00000014025	GPATCH11	99	76.923	Sarcophilus_harrisii
ENSRNOG00000025317	Gpatch11	99	55.769	ENSSFOG00015009032	gpatch11	99	56.274	Scleropages_formosus
ENSRNOG00000025317	Gpatch11	99	55.725	ENSSMAG00000010220	gpatch11	99	55.725	Scophthalmus_maximus
ENSRNOG00000025317	Gpatch11	99	55.894	ENSSDUG00000002757	gpatch11	99	55.894	Seriola_dumerili
ENSRNOG00000025317	Gpatch11	99	55.894	ENSSLDG00000024915	gpatch11	99	55.513	Seriola_lalandi_dorsalis
ENSRNOG00000025317	Gpatch11	100	70.385	ENSSPUG00000014858	GPATCH11	100	70.000	Sphenodon_punctatus
ENSRNOG00000025317	Gpatch11	99	55.303	ENSSPAG00000007690	gpatch11	99	56.107	Stegastes_partitus
ENSRNOG00000025317	Gpatch11	100	88.846	ENSSSCG00000008497	GPATCH11	98	88.462	Sus_scrofa
ENSRNOG00000025317	Gpatch11	99	70.543	ENSTGUG00000008777	GPATCH11	99	70.543	Taeniopygia_guttata
ENSRNOG00000025317	Gpatch11	99	56.589	ENSTRUG00000024052	gpatch11	99	56.589	Takifugu_rubripes
ENSRNOG00000025317	Gpatch11	99	57.752	ENSTNIG00000001655	gpatch11	98	57.752	Tetraodon_nigroviridis
ENSRNOG00000025317	Gpatch11	100	67.692	ENSTBEG00000014288	GPATCH11	93	67.692	Tupaia_belangeri
ENSRNOG00000025317	Gpatch11	100	88.462	ENSUAMG00000015138	GPATCH11	98	88.462	Ursus_americanus
ENSRNOG00000025317	Gpatch11	100	88.077	ENSUMAG00000014770	GPATCH11	98	88.077	Ursus_maritimus
ENSRNOG00000025317	Gpatch11	100	90.000	ENSVPAG00000003301	GPATCH11	97	89.615	Vicugna_pacos
ENSRNOG00000025317	Gpatch11	100	79.615	ENSVVUG00000018917	-	98	79.615	Vulpes_vulpes
ENSRNOG00000025317	Gpatch11	56	86.207	ENSVVUG00000007359	-	97	86.207	Vulpes_vulpes
ENSRNOG00000025317	Gpatch11	99	63.953	ENSXETG00000018544	gpatch11	99	63.953	Xenopus_tropicalis
ENSRNOG00000025317	Gpatch11	99	53.488	ENSXCOG00000007004	gpatch11	99	53.876	Xiphophorus_couchianus
ENSRNOG00000025317	Gpatch11	99	54.264	ENSXMAG00000006508	gpatch11	99	54.651	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000776	kinetochore	21873635.	IBA	Component
GO:0000776	kinetochore	-	ISO	Component
GO:0003676	nucleic acid binding	-	IEA	Function