EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000025596 (Gene tree)
Gene ID: 298533
Gene Symbol: Ago4
Alias: Eif2c4|LOC298533
Full Name: argonaute 4%2C RISC catalytic component
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 51952 bases
Position: chr5:144504938-144556889
Accession: 1304583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000029180	PAZ	PF02170.22	1.8e-21	1	1
ENSRNOP00000029180	Piwi	PF02171.17	2.8e-104	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000035373	-	3737	XM_006238862	ENSRNOP00000029180	597 (aa)	XP_006238924	F1LUQ5

Gene Model

Click here to download ENSRNOG00000025596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000025596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000025596	Ago4	100	81.072	ENSRNOG00000008533	Ago2	66	81.072
ENSRNOG00000025596	Ago4	100	85.595	ENSRNOG00000055915	Ago1	68	85.595
ENSRNOG00000025596	Ago4	100	85.427	ENSRNOG00000034269	Ago3	68	85.427

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000025596	Ago4	100	98.325	ENSG00000134698	AGO4	69	98.325	Homo_sapiens
ENSRNOG00000025596	Ago4	94	95.105	ENSAPOG00000023867	ago4	68	95.105	Acanthochromis_polyacanthus
ENSRNOG00000025596	Ago4	100	98.325	ENSAMEG00000000573	AGO4	69	98.325	Ailuropoda_melanoleuca
ENSRNOG00000025596	Ago4	100	96.985	ENSACIG00000014548	ago4	75	96.985	Amphilophus_citrinellus
ENSRNOG00000025596	Ago4	100	91.122	ENSAPEG00000022426	ago4	74	91.122	Amphiprion_percula
ENSRNOG00000025596	Ago4	100	95.230	ENSATEG00000006717	ago4	76	95.230	Anabas_testudineus
ENSRNOG00000025596	Ago4	100	97.990	ENSAPLG00000010882	AGO4	70	97.990	Anas_platyrhynchos
ENSRNOG00000025596	Ago4	100	96.817	ENSACAG00000017275	AGO4	69	96.817	Anolis_carolinensis
ENSRNOG00000025596	Ago4	100	98.325	ENSANAG00000031428	AGO4	69	98.325	Aotus_nancymaae
ENSRNOG00000025596	Ago4	100	95.230	ENSACLG00000005181	ago4	75	93.300	Astatotilapia_calliptera
ENSRNOG00000025596	Ago4	100	94.901	ENSAMXG00000010318	ago4	75	94.640	Astyanax_mexicanus
ENSRNOG00000025596	Ago4	100	98.157	ENSBTAG00000015220	AGO4	69	98.157	Bos_taurus
ENSRNOG00000025596	Ago4	100	98.325	ENSCJAG00000001610	AGO4	69	98.325	Callithrix_jacchus
ENSRNOG00000025596	Ago4	100	98.325	ENSCAFG00000024306	AGO4	75	98.325	Canis_familiaris
ENSRNOG00000025596	Ago4	100	98.492	ENSCHIG00000026564	AGO4	69	98.492	Capra_hircus
ENSRNOG00000025596	Ago4	100	98.325	ENSTSYG00000014007	AGO4	70	98.325	Carlito_syrichta
ENSRNOG00000025596	Ago4	92	97.354	ENSCAPG00000009369	AGO4	68	97.354	Cavia_aperea
ENSRNOG00000025596	Ago4	100	98.325	ENSCPOG00000011557	AGO4	70	98.325	Cavia_porcellus
ENSRNOG00000025596	Ago4	100	98.325	ENSCCAG00000001397	AGO4	69	98.325	Cebus_capucinus
ENSRNOG00000025596	Ago4	100	98.325	ENSCATG00000043421	AGO4	100	98.708	Cercocebus_atys
ENSRNOG00000025596	Ago4	100	98.157	ENSCLAG00000012097	AGO4	70	98.157	Chinchilla_lanigera
ENSRNOG00000025596	Ago4	100	98.325	ENSCSAG00000001090	AGO4	69	98.325	Chlorocebus_sabaeus
ENSRNOG00000025596	Ago4	89	98.525	ENSCHOG00000006867	AGO4	63	98.525	Choloepus_hoffmanni
ENSRNOG00000025596	Ago4	100	97.990	ENSCPBG00000018602	AGO4	69	97.990	Chrysemys_picta_bellii
ENSRNOG00000025596	Ago4	100	98.325	ENSCANG00000016914	AGO4	70	98.325	Colobus_angolensis_palliatus
ENSRNOG00000025596	Ago4	100	98.995	ENSCGRG00001002701	Ago4	69	98.995	Cricetulus_griseus_chok1gshd
ENSRNOG00000025596	Ago4	100	98.995	ENSCGRG00000013335	Ago4	70	98.995	Cricetulus_griseus_crigri
ENSRNOG00000025596	Ago4	100	89.149	ENSCSEG00000010696	ago4	75	89.149	Cynoglossus_semilaevis
ENSRNOG00000025596	Ago4	100	96.817	ENSDARG00000100854	ago4	69	96.817	Danio_rerio
ENSRNOG00000025596	Ago4	100	98.325	ENSDNOG00000015674	AGO4	69	98.325	Dasypus_novemcinctus
ENSRNOG00000025596	Ago4	100	98.325	ENSDORG00000008933	Ago4	69	98.325	Dipodomys_ordii
ENSRNOG00000025596	Ago4	59	97.537	ENSETEG00000018390	AGO4	57	97.537	Echinops_telfairi
ENSRNOG00000025596	Ago4	100	98.325	ENSEASG00005012079	AGO4	69	98.325	Equus_asinus_asinus
ENSRNOG00000025596	Ago4	100	98.325	ENSECAG00000024686	AGO4	69	98.325	Equus_caballus
ENSRNOG00000025596	Ago4	100	94.901	ENSELUG00000023873	ago4	69	94.901	Esox_lucius
ENSRNOG00000025596	Ago4	100	98.325	ENSFCAG00000006218	AGO4	69	98.325	Felis_catus
ENSRNOG00000025596	Ago4	100	98.325	ENSFDAG00000021483	AGO4	70	98.325	Fukomys_damarensis
ENSRNOG00000025596	Ago4	100	90.955	ENSFHEG00000019658	ago4	74	90.955	Fundulus_heteroclitus
ENSRNOG00000025596	Ago4	100	96.817	ENSGMOG00000009544	ago4	69	96.817	Gadus_morhua
ENSRNOG00000025596	Ago4	100	97.990	ENSGALG00000039713	AGO4	75	97.990	Gallus_gallus
ENSRNOG00000025596	Ago4	100	95.066	ENSGAFG00000017239	ago4	70	95.066	Gambusia_affinis
ENSRNOG00000025596	Ago4	100	97.152	ENSGACG00000002683	ago4	69	97.152	Gasterosteus_aculeatus
ENSRNOG00000025596	Ago4	100	97.990	ENSGAGG00000012897	AGO4	75	97.990	Gopherus_agassizii
ENSRNOG00000025596	Ago4	100	93.478	ENSGGOG00000036532	AGO4	70	93.478	Gorilla_gorilla
ENSRNOG00000025596	Ago4	100	95.230	ENSHBUG00000001525	ago4	70	95.230	Haplochromis_burtoni
ENSRNOG00000025596	Ago4	100	98.325	ENSHGLG00000010241	AGO4	69	98.325	Heterocephalus_glaber_female
ENSRNOG00000025596	Ago4	100	98.325	ENSHGLG00100005233	AGO4	70	98.325	Heterocephalus_glaber_male
ENSRNOG00000025596	Ago4	100	95.066	ENSHCOG00000003725	ago4	70	95.066	Hippocampus_comes
ENSRNOG00000025596	Ago4	100	95.066	ENSIPUG00000015600	ago4	70	95.066	Ictalurus_punctatus
ENSRNOG00000025596	Ago4	100	98.325	ENSSTOG00000004725	AGO4	69	98.325	Ictidomys_tridecemlineatus
ENSRNOG00000025596	Ago4	65	98.450	ENSJJAG00000003401	-	100	98.450	Jaculus_jaculus
ENSRNOG00000025596	Ago4	100	95.066	ENSKMAG00000018602	ago4	70	95.066	Kryptolebias_marmoratus
ENSRNOG00000025596	Ago4	100	94.300	ENSLBEG00000010670	ago4	70	94.300	Labrus_bergylta
ENSRNOG00000025596	Ago4	100	97.822	ENSLACG00000016888	AGO4	69	97.822	Latimeria_chalumnae
ENSRNOG00000025596	Ago4	100	95.395	ENSLOCG00000000584	ago4	70	95.395	Lepisosteus_oculatus
ENSRNOG00000025596	Ago4	100	97.659	ENSLAFG00000010394	AGO4	75	97.659	Loxodonta_africana
ENSRNOG00000025596	Ago4	100	98.325	ENSMFAG00000035543	AGO4	69	98.325	Macaca_fascicularis
ENSRNOG00000025596	Ago4	100	98.161	ENSMMUG00000003343	AGO4	100	98.016	Macaca_mulatta
ENSRNOG00000025596	Ago4	100	98.325	ENSMNEG00000037723	AGO4	100	98.016	Macaca_nemestrina
ENSRNOG00000025596	Ago4	100	98.325	ENSMLEG00000039490	AGO4	70	98.325	Mandrillus_leucophaeus
ENSRNOG00000025596	Ago4	100	95.395	ENSMAMG00000003874	ago4	82	95.395	Mastacembelus_armatus
ENSRNOG00000025596	Ago4	100	95.230	ENSMZEG00005026346	ago4	70	95.230	Maylandia_zebra
ENSRNOG00000025596	Ago4	100	97.822	ENSMGAG00000003851	AGO4	70	97.822	Meleagris_gallopavo
ENSRNOG00000025596	Ago4	85	100.000	ENSMAUG00000021743	Ago4	63	100.000	Mesocricetus_auratus
ENSRNOG00000025596	Ago4	100	98.161	ENSMICG00000033507	AGO4	70	98.161	Microcebus_murinus
ENSRNOG00000025596	Ago4	100	98.995	ENSMOCG00000005772	Ago4	69	98.995	Microtus_ochrogaster
ENSRNOG00000025596	Ago4	100	95.645	ENSMMOG00000013473	ago4	75	95.645	Mola_mola
ENSRNOG00000025596	Ago4	100	98.157	ENSMODG00000017888	AGO4	69	98.157	Monodelphis_domestica
ENSRNOG00000025596	Ago4	100	94.807	ENSMALG00000011797	ago4	71	94.637	Monopterus_albus
ENSRNOG00000025596	Ago4	100	98.492	MGP_CAROLIEiJ_G0026479	Ago4	69	98.492	Mus_caroli
ENSRNOG00000025596	Ago4	100	97.990	ENSMUSG00000042500	Ago4	69	97.990	Mus_musculus
ENSRNOG00000025596	Ago4	100	98.157	MGP_PahariEiJ_G0028810	Ago4	69	98.157	Mus_pahari
ENSRNOG00000025596	Ago4	100	98.157	MGP_SPRETEiJ_G0027458	Ago4	69	98.157	Mus_spretus
ENSRNOG00000025596	Ago4	100	98.325	ENSMPUG00000014876	AGO4	75	98.325	Mustela_putorius_furo
ENSRNOG00000025596	Ago4	100	96.985	ENSMLUG00000017102	AGO4	68	96.985	Myotis_lucifugus
ENSRNOG00000025596	Ago4	100	98.325	ENSNGAG00000020544	Ago4	70	98.325	Nannospalax_galili
ENSRNOG00000025596	Ago4	100	95.230	ENSNBRG00000013492	ago4	70	95.230	Neolamprologus_brichardi
ENSRNOG00000025596	Ago4	100	98.325	ENSNLEG00000011125	AGO4	70	98.325	Nomascus_leucogenys
ENSRNOG00000025596	Ago4	86	97.059	ENSMEUG00000001023	AGO4	60	97.059	Notamacropus_eugenii
ENSRNOG00000025596	Ago4	97	93.253	ENSOPRG00000012309	AGO4	68	93.253	Ochotona_princeps
ENSRNOG00000025596	Ago4	100	98.325	ENSODEG00000006355	AGO4	73	98.325	Octodon_degus
ENSRNOG00000025596	Ago4	100	96.315	ENSONIG00000013603	ago4	70	95.230	Oreochromis_niloticus
ENSRNOG00000025596	Ago4	100	98.157	ENSOANG00000002082	AGO4	75	98.157	Ornithorhynchus_anatinus
ENSRNOG00000025596	Ago4	100	98.325	ENSOCUG00000004076	AGO4	69	98.325	Oryctolagus_cuniculus
ENSRNOG00000025596	Ago4	100	95.230	ENSORLG00000009865	ago4	64	95.230	Oryzias_latipes
ENSRNOG00000025596	Ago4	100	95.230	ENSORLG00020016978	ago4	64	95.230	Oryzias_latipes_hni
ENSRNOG00000025596	Ago4	100	95.230	ENSORLG00015008800	ago4	64	95.230	Oryzias_latipes_hsok
ENSRNOG00000025596	Ago4	100	95.230	ENSOMEG00000006399	ago4	70	95.230	Oryzias_melastigma
ENSRNOG00000025596	Ago4	100	96.817	ENSOGAG00000004233	-	74	96.817	Otolemur_garnettii
ENSRNOG00000025596	Ago4	100	91.290	ENSOGAG00000027107	-	69	91.290	Otolemur_garnettii
ENSRNOG00000025596	Ago4	100	97.822	ENSOARG00000019568	AGO4	68	97.822	Ovis_aries
ENSRNOG00000025596	Ago4	100	98.325	ENSPPAG00000031752	AGO4	70	98.325	Pan_paniscus
ENSRNOG00000025596	Ago4	100	98.325	ENSPPRG00000006520	AGO4	69	98.325	Panthera_pardus
ENSRNOG00000025596	Ago4	100	98.325	ENSPTIG00000020262	AGO4	70	98.325	Panthera_tigris_altaica
ENSRNOG00000025596	Ago4	100	98.325	ENSPTRG00000000527	AGO4	70	98.161	Pan_troglodytes
ENSRNOG00000025596	Ago4	100	98.325	ENSPANG00000007232	AGO4	75	98.325	Papio_anubis
ENSRNOG00000025596	Ago4	100	95.230	ENSPKIG00000022598	ago4	70	95.230	Paramormyrops_kingsleyae
ENSRNOG00000025596	Ago4	100	97.990	ENSPSIG00000013832	AGO4	69	97.990	Pelodiscus_sinensis
ENSRNOG00000025596	Ago4	100	96.817	ENSPMGG00000023325	ago4	75	96.817	Periophthalmus_magnuspinnatus
ENSRNOG00000025596	Ago4	100	84.307	ENSPEMG00000022651	-	63	100.000	Peromyscus_maniculatus_bairdii
ENSRNOG00000025596	Ago4	100	98.157	ENSPCIG00000000092	AGO4	69	98.157	Phascolarctos_cinereus
ENSRNOG00000025596	Ago4	100	95.066	ENSPFOG00000001935	ago4	70	95.066	Poecilia_formosa
ENSRNOG00000025596	Ago4	100	96.817	ENSPLAG00000011534	ago4	83	95.477	Poecilia_latipinna
ENSRNOG00000025596	Ago4	100	95.066	ENSPMEG00000005049	ago4	70	95.066	Poecilia_mexicana
ENSRNOG00000025596	Ago4	100	95.066	ENSPREG00000010315	ago4	70	95.066	Poecilia_reticulata
ENSRNOG00000025596	Ago4	100	98.325	ENSPPYG00000001552	AGO4	70	98.325	Pongo_abelii
ENSRNOG00000025596	Ago4	100	98.161	ENSPCOG00000015935	AGO4	70	98.161	Propithecus_coquereli
ENSRNOG00000025596	Ago4	83	100.000	ENSPVAG00000005079	AGO4	58	100.000	Pteropus_vampyrus
ENSRNOG00000025596	Ago4	100	95.230	ENSPNYG00000002089	ago4	70	95.230	Pundamilia_nyererei
ENSRNOG00000025596	Ago4	100	96.817	ENSPNAG00000005191	ago4	69	96.817	Pygocentrus_nattereri
ENSRNOG00000025596	Ago4	100	98.161	ENSRBIG00000040185	AGO4	100	98.016	Rhinopithecus_bieti
ENSRNOG00000025596	Ago4	100	98.325	ENSRROG00000035783	AGO4	75	98.325	Rhinopithecus_roxellana
ENSRNOG00000025596	Ago4	100	98.325	ENSSBOG00000026529	AGO4	79	98.325	Saimiri_boliviensis_boliviensis
ENSRNOG00000025596	Ago4	100	98.157	ENSSHAG00000017320	AGO4	69	98.157	Sarcophilus_harrisii
ENSRNOG00000025596	Ago4	100	94.901	ENSSFOG00015022028	ago4	76	94.901	Scleropages_formosus
ENSRNOG00000025596	Ago4	100	95.066	ENSSMAG00000000808	ago4	63	95.066	Scophthalmus_maximus
ENSRNOG00000025596	Ago4	100	96.147	ENSSDUG00000020781	ago4	75	96.147	Seriola_dumerili
ENSRNOG00000025596	Ago4	100	96.985	ENSSLDG00000021841	ago4	75	96.985	Seriola_lalandi_dorsalis
ENSRNOG00000025596	Ago4	100	97.822	ENSSPUG00000000889	AGO4	69	97.822	Sphenodon_punctatus
ENSRNOG00000025596	Ago4	100	90.620	ENSTGUG00000001631	AGO4	69	90.620	Taeniopygia_guttata
ENSRNOG00000025596	Ago4	100	95.230	ENSTRUG00000008052	ago4	70	95.230	Takifugu_rubripes
ENSRNOG00000025596	Ago4	100	96.985	ENSTNIG00000006331	ago4	69	96.985	Tetraodon_nigroviridis
ENSRNOG00000025596	Ago4	80	100.000	ENSTBEG00000016478	AGO4	55	100.000	Tupaia_belangeri
ENSRNOG00000025596	Ago4	97	98.273	ENSTTRG00000015086	AGO4	68	98.273	Tursiops_truncatus
ENSRNOG00000025596	Ago4	100	98.325	ENSUAMG00000027156	-	75	98.325	Ursus_americanus
ENSRNOG00000025596	Ago4	100	95.812	ENSUMAG00000006297	AGO4	69	94.137	Ursus_maritimus
ENSRNOG00000025596	Ago4	100	97.487	ENSVPAG00000006662	AGO4	79	97.487	Vicugna_pacos
ENSRNOG00000025596	Ago4	100	98.325	ENSVVUG00000000465	-	75	98.325	Vulpes_vulpes
ENSRNOG00000025596	Ago4	99	81.681	ENSXETG00000009664	ago4	68	81.681	Xenopus_tropicalis
ENSRNOG00000025596	Ago4	51	75.817	ENSXCOG00000018907	ago4	99	75.817	Xiphophorus_couchianus
ENSRNOG00000025596	Ago4	100	95.066	ENSXMAG00000016657	ago4	70	95.066	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000932	P-body	-	ISO	Component
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0003725	double-stranded RNA binding	-	IEA	Function
GO:0003725	double-stranded RNA binding	-	ISO	Function
GO:0003727	single-stranded RNA binding	-	IEA	Function
GO:0003727	single-stranded RNA binding	-	ISO	Function
GO:0003743	translation initiation factor activity	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006402	mRNA catabolic process	-	IEA	Process
GO:0006402	mRNA catabolic process	-	ISO	Process
GO:0006413	translational initiation	-	IEA	Process
GO:0007130	synaptonemal complex assembly	-	ISO	Process
GO:0007140	male meiotic nuclear division	-	ISO	Process
GO:0008150	biological_process	-	ND	Process
GO:0008584	male gonad development	-	ISO	Process
GO:0010501	RNA secondary structure unwinding	-	IEA	Process
GO:0010501	RNA secondary structure unwinding	-	ISO	Process
GO:0010586	miRNA metabolic process	-	ISO	Process
GO:0016442	RISC complex	-	IEA	Component
GO:0016442	RISC complex	-	ISO	Component
GO:0016604	nuclear body	-	IEA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0022604	regulation of cell morphogenesis	-	ISO	Process
GO:0031054	pre-miRNA processing	-	IEA	Process
GO:0031054	pre-miRNA processing	-	ISO	Process
GO:0035068	micro-ribonucleoprotein complex	-	ISO	Component
GO:0035196	production of miRNAs involved in gene silencing by miRNA	-	ISO	Process
GO:0035198	miRNA binding	-	IEA	Function
GO:0035198	miRNA binding	-	ISO	Function
GO:0035278	miRNA mediated inhibition of translation	-	IEA	Process
GO:0035278	miRNA mediated inhibition of translation	-	ISO	Process
GO:0035279	mRNA cleavage involved in gene silencing by miRNA	-	ISO	Process
GO:0035280	miRNA loading onto RISC involved in gene silencing by miRNA	-	IEA	Process
GO:0035280	miRNA loading onto RISC involved in gene silencing by miRNA	-	ISO	Process
GO:0043066	negative regulation of apoptotic process	-	ISO	Process
GO:0070578	RISC-loading complex	-	IEA	Component
GO:0070578	RISC-loading complex	-	ISO	Component
GO:0090625	mRNA cleavage involved in gene silencing by siRNA	-	ISO	Process