EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000025794 (Gene tree)
Gene ID: -
Gene Symbol: AABR07021239.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 225 bases
Position: chr13:62524332-62524556
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000048847	Ribosomal_L29e	PF01779.17	1.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000033201	AABR07021239.1-201	225	-	ENSRNOP00000048847	75 (aa)	-	D3Z7Z0

Gene Model

Click here to download ENSRNOG00000025794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000025794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000025794	AABR07021239.1	61	84.783	ENSRNOG00000021843	AABR07072463.1	59	69.014

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000025794	AABR07021239.1	61	89.130	ENSG00000162244	RPL29	92	91.176	Homo_sapiens
ENSRNOG00000025794	AABR07021239.1	69	82.692	ENSAPOG00000002586	rpl29	81	82.692	Acanthochromis_polyacanthus
ENSRNOG00000025794	AABR07021239.1	69	86.538	ENSACIG00000018340	rpl29	81	86.538	Amphilophus_citrinellus
ENSRNOG00000025794	AABR07021239.1	69	86.538	ENSAOCG00000016652	rpl29	81	86.538	Amphiprion_ocellaris
ENSRNOG00000025794	AABR07021239.1	69	86.538	ENSAPEG00000005754	rpl29	81	86.538	Amphiprion_percula
ENSRNOG00000025794	AABR07021239.1	61	86.957	ENSACAG00000006888	RPL29	80	88.462	Anolis_carolinensis
ENSRNOG00000025794	AABR07021239.1	61	89.130	ENSANAG00000024147	-	77	73.913	Aotus_nancymaae
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSACLG00000017820	rpl29	81	88.462	Astatotilapia_calliptera
ENSRNOG00000025794	AABR07021239.1	69	86.538	ENSAMXG00000038794	rpl29	81	86.538	Astyanax_mexicanus
ENSRNOG00000025794	AABR07021239.1	80	46.667	WBGene00004443	rpl-29	97	46.667	Caenorhabditis_elegans
ENSRNOG00000025794	AABR07021239.1	61	89.130	ENSCJAG00000042339	-	77	73.913	Callithrix_jacchus
ENSRNOG00000025794	AABR07021239.1	61	89.130	ENSCCAG00000027980	-	58	88.571	Cebus_capucinus
ENSRNOG00000025794	AABR07021239.1	59	75.556	ENSCPBG00000016679	-	58	75.556	Chrysemys_picta_bellii
ENSRNOG00000025794	AABR07021239.1	69	69.231	ENSCING00000018496	-	90	69.231	Ciona_intestinalis
ENSRNOG00000025794	AABR07021239.1	71	67.925	ENSCSAVG00000005231	-	90	67.925	Ciona_savignyi
ENSRNOG00000025794	AABR07021239.1	61	89.130	ENSCGRG00001016452	-	76	90.385	Cricetulus_griseus_chok1gshd
ENSRNOG00000025794	AABR07021239.1	67	86.000	ENSCSEG00000010267	rpl29	79	86.538	Cynoglossus_semilaevis
ENSRNOG00000025794	AABR07021239.1	67	90.000	ENSCVAG00000023098	rpl29	81	90.385	Cyprinodon_variegatus
ENSRNOG00000025794	AABR07021239.1	72	88.889	ENSDARG00000077717	rpl29	84	88.889	Danio_rerio
ENSRNOG00000025794	AABR07021239.1	87	60.000	ENSDNOG00000038982	-	52	60.000	Dasypus_novemcinctus
ENSRNOG00000025794	AABR07021239.1	67	58.000	FBgn0016726	RpL29	66	58.000	Drosophila_melanogaster
ENSRNOG00000025794	AABR07021239.1	59	84.091	ENSEASG00005005507	-	68	84.091	Equus_asinus_asinus
ENSRNOG00000025794	AABR07021239.1	69	78.846	ENSELUG00000015592	RL29	74	78.846	Esox_lucius
ENSRNOG00000025794	AABR07021239.1	84	55.556	ENSFCAG00000043006	-	77	55.556	Felis_catus
ENSRNOG00000025794	AABR07021239.1	99	44.595	ENSFCAG00000035470	-	57	69.767	Felis_catus
ENSRNOG00000025794	AABR07021239.1	61	82.609	ENSFALG00000008925	RPL29	76	84.615	Ficedula_albicollis
ENSRNOG00000025794	AABR07021239.1	69	90.385	ENSFHEG00000015425	rpl29	81	90.385	Fundulus_heteroclitus
ENSRNOG00000025794	AABR07021239.1	69	76.923	ENSGMOG00000003626	rpl29	68	76.923	Gadus_morhua
ENSRNOG00000025794	AABR07021239.1	61	86.957	ENSGALG00000026978	RPL29	73	88.462	Gallus_gallus
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSGAFG00000012868	rpl29	81	88.462	Gambusia_affinis
ENSRNOG00000025794	AABR07021239.1	69	84.615	ENSGACG00000007041	rpl29	68	84.615	Gasterosteus_aculeatus
ENSRNOG00000025794	AABR07021239.1	57	74.419	ENSGAGG00000024203	-	80	74.419	Gopherus_agassizii
ENSRNOG00000025794	AABR07021239.1	61	89.130	ENSGGOG00000024691	RPL29	75	73.333	Gorilla_gorilla
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSHBUG00000010519	rpl29	81	88.462	Haplochromis_burtoni
ENSRNOG00000025794	AABR07021239.1	67	86.000	ENSHCOG00000000478	rpl29	67	86.538	Hippocampus_comes
ENSRNOG00000025794	AABR07021239.1	69	86.538	ENSIPUG00000001196	rpl29	81	86.538	Ictalurus_punctatus
ENSRNOG00000025794	AABR07021239.1	69	90.385	ENSKMAG00000011291	rpl29	81	90.385	Kryptolebias_marmoratus
ENSRNOG00000025794	AABR07021239.1	69	84.615	ENSLBEG00000016213	rpl29	76	84.615	Labrus_bergylta
ENSRNOG00000025794	AABR07021239.1	76	77.193	ENSLACG00000018031	-	90	73.016	Latimeria_chalumnae
ENSRNOG00000025794	AABR07021239.1	84	73.016	ENSLACG00000018622	rpl29	95	73.016	Latimeria_chalumnae
ENSRNOG00000025794	AABR07021239.1	61	84.783	ENSLOCG00000013798	rpl29	80	86.538	Lepisosteus_oculatus
ENSRNOG00000025794	AABR07021239.1	69	86.538	ENSMAMG00000014274	rpl29	55	86.538	Mastacembelus_armatus
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSMZEG00005013519	rpl29	81	88.462	Maylandia_zebra
ENSRNOG00000025794	AABR07021239.1	61	86.957	ENSMGAG00000001213	RPL29	73	88.462	Meleagris_gallopavo
ENSRNOG00000025794	AABR07021239.1	65	79.592	ENSMICG00000049466	-	74	79.592	Microcebus_murinus
ENSRNOG00000025794	AABR07021239.1	69	84.615	ENSMMOG00000010430	rpl29	81	84.615	Mola_mola
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSMALG00000009023	rpl29	67	88.462	Monopterus_albus
ENSRNOG00000025794	AABR07021239.1	61	89.130	ENSMUSG00000048758	Rpl29	76	90.385	Mus_musculus
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSNBRG00000022109	rpl29	81	88.462	Neolamprologus_brichardi
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSONIG00000014377	rpl29	83	88.462	Oreochromis_niloticus
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSORLG00000023610	rpl29	55	88.462	Oryzias_latipes
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSORLG00020018665	rpl29	55	88.462	Oryzias_latipes_hni
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSORLG00015014455	rpl29	55	88.462	Oryzias_latipes_hsok
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSOMEG00000019919	rpl29	81	88.462	Oryzias_melastigma
ENSRNOG00000025794	AABR07021239.1	69	67.308	ENSPPRG00000011689	-	80	67.308	Panthera_pardus
ENSRNOG00000025794	AABR07021239.1	69	65.385	ENSPTIG00000011913	-	63	65.385	Panthera_tigris_altaica
ENSRNOG00000025794	AABR07021239.1	61	89.130	ENSPTRG00000043237	RPL29	63	83.784	Pan_troglodytes
ENSRNOG00000025794	AABR07021239.1	61	82.609	ENSPKIG00000025048	rpl29	79	84.615	Paramormyrops_kingsleyae
ENSRNOG00000025794	AABR07021239.1	61	89.130	ENSPSIG00000014699	RPL29	83	90.385	Pelodiscus_sinensis
ENSRNOG00000025794	AABR07021239.1	69	84.615	ENSPMGG00000005361	rpl29	76	84.615	Periophthalmus_magnuspinnatus
ENSRNOG00000025794	AABR07021239.1	61	89.130	ENSPEMG00000004069	-	51	69.014	Peromyscus_maniculatus_bairdii
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSPFOG00000011385	rpl29	85	88.462	Poecilia_formosa
ENSRNOG00000025794	AABR07021239.1	67	86.000	ENSPLAG00000012042	rpl29	81	86.538	Poecilia_latipinna
ENSRNOG00000025794	AABR07021239.1	67	88.000	ENSPMEG00000018297	rpl29	81	88.462	Poecilia_mexicana
ENSRNOG00000025794	AABR07021239.1	67	88.000	ENSPREG00000007066	rpl29	81	88.462	Poecilia_reticulata
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSPNYG00000019481	rpl29	81	88.462	Pundamilia_nyererei
ENSRNOG00000025794	AABR07021239.1	69	90.385	ENSPNAG00000007550	rpl29	81	90.385	Pygocentrus_nattereri
ENSRNOG00000025794	AABR07021239.1	61	65.217	YFR032C-A	RPL29	71	69.048	Saccharomyces_cerevisiae
ENSRNOG00000025794	AABR07021239.1	68	88.235	ENSSMAG00000013571	rpl29	80	88.235	Scophthalmus_maximus
ENSRNOG00000025794	AABR07021239.1	67	86.000	ENSSDUG00000016140	rpl29	81	86.538	Seriola_dumerili
ENSRNOG00000025794	AABR07021239.1	61	61.702	ENSSDUG00000020458	-	76	61.702	Seriola_dumerili
ENSRNOG00000025794	AABR07021239.1	67	86.000	ENSSLDG00000003932	rpl29	81	86.538	Seriola_lalandi_dorsalis
ENSRNOG00000025794	AABR07021239.1	61	86.957	ENSSPUG00000003760	RPL29	83	88.462	Sphenodon_punctatus
ENSRNOG00000025794	AABR07021239.1	69	76.923	ENSSPAG00000020292	rpl29	81	76.923	Stegastes_partitus
ENSRNOG00000025794	AABR07021239.1	51	84.211	ENSSSCG00000037047	-	90	86.364	Sus_scrofa
ENSRNOG00000025794	AABR07021239.1	64	62.500	ENSSSCG00000031314	-	75	62.500	Sus_scrofa
ENSRNOG00000025794	AABR07021239.1	61	82.609	ENSTGUG00000006027	RPL29	83	84.615	Taeniopygia_guttata
ENSRNOG00000025794	AABR07021239.1	77	74.138	ENSTRUG00000022273	rpl29	86	74.138	Takifugu_rubripes
ENSRNOG00000025794	AABR07021239.1	69	82.692	ENSTNIG00000014816	rpl29	82	77.586	Tetraodon_nigroviridis
ENSRNOG00000025794	AABR07021239.1	83	66.129	ENSTBEG00000000807	-	76	66.129	Tupaia_belangeri
ENSRNOG00000025794	AABR07021239.1	64	85.417	ENSUAMG00000002601	-	84	85.417	Ursus_americanus
ENSRNOG00000025794	AABR07021239.1	61	86.957	ENSVVUG00000012400	-	91	88.462	Vulpes_vulpes
ENSRNOG00000025794	AABR07021239.1	61	89.130	ENSXETG00000010811	rpl29	69	90.385	Xenopus_tropicalis
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSXCOG00000013543	rpl29	81	88.462	Xiphophorus_couchianus
ENSRNOG00000025794	AABR07021239.1	69	88.462	ENSXMAG00000020948	rpl29	81	88.462	Xiphophorus_maculatus