EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000025823 (Gene tree)
Gene ID: 310548
Gene Symbol: Rbm46
Alias: LOC310548|RGD1560205
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 42980 bases
Position: chr2:181831244-181874223
Accession: 1560205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000031755	DND1_DSRM	PF14709.7	1.4e-27	1	1
ENSRNOP00000031755	RRM_1	PF00076.22	9.4e-37	1	3
ENSRNOP00000031755	RRM_1	PF00076.22	9.4e-37	2	3
ENSRNOP00000031755	RRM_1	PF00076.22	9.4e-37	3	3

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000035846	-	1788	XM_006232530	ENSRNOP00000031755	533 (aa)	XP_006232592	D3ZAE2

Gene Model

Click here to download ENSRNOG00000025823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000025823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000025823	Rbm46	59	73.101	ENSRNOG00000002408	Rbm47	54	73.101
ENSRNOG00000025823	Rbm46	77	70.382	ENSRNOG00000033195	A1cf	76	70.382
ENSRNOG00000025823	Rbm46	56	54.667	ENSRNOG00000000204	Syncrip	53	54.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000025823	Rbm46	100	97.373	ENSG00000151962	RBM46	100	98.496	Homo_sapiens
ENSRNOG00000025823	Rbm46	87	65.751	ENSAPOG00000009209	rbm46	92	65.401	Acanthochromis_polyacanthus
ENSRNOG00000025823	Rbm46	100	98.311	ENSAMEG00000013290	RBM46	100	98.311	Ailuropoda_melanoleuca
ENSRNOG00000025823	Rbm46	86	60.684	ENSACIG00000014500	rbm46	91	60.084	Amphilophus_citrinellus
ENSRNOG00000025823	Rbm46	94	62.227	ENSAOCG00000001892	-	98	62.227	Amphiprion_ocellaris
ENSRNOG00000025823	Rbm46	83	67.342	ENSAPEG00000017762	rbm46	96	67.342	Amphiprion_percula
ENSRNOG00000025823	Rbm46	98	59.847	ENSATEG00000010775	rbm46	98	60.115	Anabas_testudineus
ENSRNOG00000025823	Rbm46	88	88.437	ENSAPLG00000005116	RBM46	100	88.437	Anas_platyrhynchos
ENSRNOG00000025823	Rbm46	100	89.869	ENSACAG00000015599	RBM46	100	89.869	Anolis_carolinensis
ENSRNOG00000025823	Rbm46	100	96.060	ENSANAG00000029193	RBM46	100	96.060	Aotus_nancymaae
ENSRNOG00000025823	Rbm46	90	62.200	ENSACLG00000016153	rbm46	94	60.073	Astatotilapia_calliptera
ENSRNOG00000025823	Rbm46	85	67.849	ENSAMXG00000009397	rbm46	98	67.849	Astyanax_mexicanus
ENSRNOG00000025823	Rbm46	96	60.491	ENSAMXG00000020892	-	99	60.491	Astyanax_mexicanus
ENSRNOG00000025823	Rbm46	100	97.186	ENSBTAG00000001696	RBM46	100	97.186	Bos_taurus
ENSRNOG00000025823	Rbm46	100	94.184	ENSCJAG00000001768	RBM46	99	96.574	Callithrix_jacchus
ENSRNOG00000025823	Rbm46	100	98.124	ENSCAFG00000008473	RBM46	100	98.124	Canis_familiaris
ENSRNOG00000025823	Rbm46	100	98.124	ENSCAFG00020002468	RBM46	100	98.124	Canis_lupus_dingo
ENSRNOG00000025823	Rbm46	100	96.998	ENSCHIG00000000502	RBM46	100	96.998	Capra_hircus
ENSRNOG00000025823	Rbm46	88	97.863	ENSTSYG00000010435	RBM46	99	97.859	Carlito_syrichta
ENSRNOG00000025823	Rbm46	69	91.870	ENSCAPG00000011841	-	99	91.870	Cavia_aperea
ENSRNOG00000025823	Rbm46	90	94.792	ENSCAPG00000011928	-	98	94.792	Cavia_aperea
ENSRNOG00000025823	Rbm46	100	95.506	ENSCPOG00000010284	-	100	95.506	Cavia_porcellus
ENSRNOG00000025823	Rbm46	96	88.889	ENSCPOG00000020396	-	99	88.889	Cavia_porcellus
ENSRNOG00000025823	Rbm46	100	91.450	ENSCPOG00000019272	-	100	91.450	Cavia_porcellus
ENSRNOG00000025823	Rbm46	100	79.174	ENSCCAG00000001323	-	100	79.174	Cebus_capucinus
ENSRNOG00000025823	Rbm46	100	97.186	ENSCCAG00000027619	-	100	97.186	Cebus_capucinus
ENSRNOG00000025823	Rbm46	88	97.650	ENSCATG00000040148	RBM46	99	97.645	Cercocebus_atys
ENSRNOG00000025823	Rbm46	100	94.184	ENSCLAG00000005846	-	99	95.931	Chinchilla_lanigera
ENSRNOG00000025823	Rbm46	97	91.313	ENSCLAG00000011886	-	99	91.313	Chinchilla_lanigera
ENSRNOG00000025823	Rbm46	100	97.373	ENSCSAG00000003263	RBM46	100	97.373	Chlorocebus_sabaeus
ENSRNOG00000025823	Rbm46	100	96.623	ENSCHOG00000003429	RBM46	100	96.623	Choloepus_hoffmanni
ENSRNOG00000025823	Rbm46	83	95.056	ENSCPBG00000009314	RBM46	97	95.056	Chrysemys_picta_bellii
ENSRNOG00000025823	Rbm46	90	95.833	ENSCANG00000039065	RBM46	99	97.430	Colobus_angolensis_palliatus
ENSRNOG00000025823	Rbm46	100	99.437	ENSCGRG00001016714	Rbm46	100	99.437	Cricetulus_griseus_chok1gshd
ENSRNOG00000025823	Rbm46	100	99.437	ENSCGRG00000011738	Rbm46	100	99.437	Cricetulus_griseus_crigri
ENSRNOG00000025823	Rbm46	86	58.369	ENSCSEG00000005530	rbm46	98	58.369	Cynoglossus_semilaevis
ENSRNOG00000025823	Rbm46	87	64.301	ENSCVAG00000021013	rbm46	96	64.301	Cyprinodon_variegatus
ENSRNOG00000025823	Rbm46	97	64.083	ENSDARG00000079452	rbm46	99	64.259	Danio_rerio
ENSRNOG00000025823	Rbm46	100	98.124	ENSDNOG00000016195	RBM46	100	98.124	Dasypus_novemcinctus
ENSRNOG00000025823	Rbm46	100	98.124	ENSDORG00000006405	Rbm46	100	98.124	Dipodomys_ordii
ENSRNOG00000025823	Rbm46	100	93.996	ENSETEG00000014902	RBM46	100	93.996	Echinops_telfairi
ENSRNOG00000025823	Rbm46	100	96.811	ENSEASG00005015821	RBM46	100	96.811	Equus_asinus_asinus
ENSRNOG00000025823	Rbm46	88	97.009	ENSECAG00000007649	RBM46	96	97.009	Equus_caballus
ENSRNOG00000025823	Rbm46	100	93.809	ENSEEUG00000011824	RBM46	100	93.809	Erinaceus_europaeus
ENSRNOG00000025823	Rbm46	71	70.681	ENSELUG00000008166	rbm46	98	69.054	Esox_lucius
ENSRNOG00000025823	Rbm46	100	97.936	ENSFCAG00000029812	RBM46	100	97.936	Felis_catus
ENSRNOG00000025823	Rbm46	88	86.510	ENSFALG00000013157	RBM46	92	86.510	Ficedula_albicollis
ENSRNOG00000025823	Rbm46	97	86.602	ENSFDAG00000006445	-	97	86.602	Fukomys_damarensis
ENSRNOG00000025823	Rbm46	100	93.058	ENSFDAG00000019281	-	100	93.058	Fukomys_damarensis
ENSRNOG00000025823	Rbm46	79	60.427	ENSFHEG00000013257	rbm46	93	60.427	Fundulus_heteroclitus
ENSRNOG00000025823	Rbm46	88	80.086	ENSGALG00000009278	RBM46	99	80.086	Gallus_gallus
ENSRNOG00000025823	Rbm46	54	81.185	ENSGAFG00000020245	rbm46	89	81.185	Gambusia_affinis
ENSRNOG00000025823	Rbm46	94	90.782	ENSGAGG00000002019	RBM46	95	90.782	Gopherus_agassizii
ENSRNOG00000025823	Rbm46	100	97.561	ENSGGOG00000001876	RBM46	100	97.561	Gorilla_gorilla
ENSRNOG00000025823	Rbm46	84	62.108	ENSHBUG00000009609	rbm46	91	66.905	Haplochromis_burtoni
ENSRNOG00000025823	Rbm46	97	76.527	ENSHGLG00000010742	-	99	76.145	Heterocephalus_glaber_female
ENSRNOG00000025823	Rbm46	98	78.707	ENSHGLG00000002940	-	100	78.707	Heterocephalus_glaber_female
ENSRNOG00000025823	Rbm46	100	86.304	ENSHGLG00000002463	-	99	94.226	Heterocephalus_glaber_female
ENSRNOG00000025823	Rbm46	100	92.683	ENSHGLG00100012752	-	99	94.218	Heterocephalus_glaber_male
ENSRNOG00000025823	Rbm46	97	76.527	ENSHGLG00100004977	-	99	76.145	Heterocephalus_glaber_male
ENSRNOG00000025823	Rbm46	97	75.191	ENSHGLG00100018987	-	99	75.048	Heterocephalus_glaber_male
ENSRNOG00000025823	Rbm46	85	52.318	ENSHCOG00000012998	rbm46	90	52.318	Hippocampus_comes
ENSRNOG00000025823	Rbm46	99	62.752	ENSIPUG00000024038	rbm46	96	66.946	Ictalurus_punctatus
ENSRNOG00000025823	Rbm46	100	98.687	ENSSTOG00000007918	RBM46	100	98.687	Ictidomys_tridecemlineatus
ENSRNOG00000025823	Rbm46	88	96.154	ENSJJAG00000003902	Rbm46	99	96.146	Jaculus_jaculus
ENSRNOG00000025823	Rbm46	94	61.252	ENSKMAG00000015127	rbm46	100	59.410	Kryptolebias_marmoratus
ENSRNOG00000025823	Rbm46	100	87.079	ENSLACG00000002062	RBM46	100	87.079	Latimeria_chalumnae
ENSRNOG00000025823	Rbm46	97	73.166	ENSLOCG00000008298	rbm46	97	77.263	Lepisosteus_oculatus
ENSRNOG00000025823	Rbm46	88	98.501	ENSLAFG00000015448	RBM46	99	98.501	Loxodonta_africana
ENSRNOG00000025823	Rbm46	88	98.077	ENSMFAG00000043485	RBM46	99	98.073	Macaca_fascicularis
ENSRNOG00000025823	Rbm46	88	98.077	ENSMMUG00000021147	RBM46	96	98.077	Macaca_mulatta
ENSRNOG00000025823	Rbm46	88	98.077	ENSMNEG00000002787	RBM46	99	98.073	Macaca_nemestrina
ENSRNOG00000025823	Rbm46	88	97.436	ENSMLEG00000029756	RBM46	99	97.430	Mandrillus_leucophaeus
ENSRNOG00000025823	Rbm46	84	66.814	ENSMAMG00000009093	rbm46	99	60.116	Mastacembelus_armatus
ENSRNOG00000025823	Rbm46	88	63.655	ENSMZEG00005027849	rbm46	97	63.202	Maylandia_zebra
ENSRNOG00000025823	Rbm46	88	80.728	ENSMGAG00000001457	RBM46	99	80.728	Meleagris_gallopavo
ENSRNOG00000025823	Rbm46	100	99.250	ENSMAUG00000009911	Rbm46	100	99.250	Mesocricetus_auratus
ENSRNOG00000025823	Rbm46	100	98.311	ENSMICG00000042747	RBM46	100	98.311	Microcebus_murinus
ENSRNOG00000025823	Rbm46	100	98.874	ENSMOCG00000001188	Rbm46	100	98.874	Microtus_ochrogaster
ENSRNOG00000025823	Rbm46	85	64.192	ENSMMOG00000011214	rbm46	97	59.429	Mola_mola
ENSRNOG00000025823	Rbm46	100	89.365	ENSMODG00000001302	RBM46	100	89.365	Monodelphis_domestica
ENSRNOG00000025823	Rbm46	83	63.348	ENSMALG00000006185	rbm46	93	63.575	Monopterus_albus
ENSRNOG00000025823	Rbm46	100	98.874	MGP_CAROLIEiJ_G0025101	Rbm46	99	100.000	Mus_caroli
ENSRNOG00000025823	Rbm46	100	98.687	ENSMUSG00000033882	Rbm46	100	98.687	Mus_musculus
ENSRNOG00000025823	Rbm46	100	98.499	MGP_PahariEiJ_G0026544	Rbm46	100	98.499	Mus_pahari
ENSRNOG00000025823	Rbm46	100	98.499	MGP_SPRETEiJ_G0026043	Rbm46	100	98.499	Mus_spretus
ENSRNOG00000025823	Rbm46	88	98.718	ENSMPUG00000005670	RBM46	96	98.718	Mustela_putorius_furo
ENSRNOG00000025823	Rbm46	100	97.378	ENSMLUG00000003221	RBM46	100	97.378	Myotis_lucifugus
ENSRNOG00000025823	Rbm46	100	96.998	ENSNGAG00000004231	Rbm46	99	98.287	Nannospalax_galili
ENSRNOG00000025823	Rbm46	84	65.919	ENSNBRG00000000273	rbm46	84	65.919	Neolamprologus_brichardi
ENSRNOG00000025823	Rbm46	88	97.863	ENSNLEG00000006184	RBM46	99	97.859	Nomascus_leucogenys
ENSRNOG00000025823	Rbm46	78	98.077	ENSMEUG00000013328	RBM46	100	98.077	Notamacropus_eugenii
ENSRNOG00000025823	Rbm46	53	98.587	ENSOPRG00000007136	RBM46	100	98.587	Ochotona_princeps
ENSRNOG00000025823	Rbm46	100	93.058	ENSODEG00000000735	-	99	94.861	Octodon_degus
ENSRNOG00000025823	Rbm46	97	88.566	ENSODEG00000018002	-	96	88.566	Octodon_degus
ENSRNOG00000025823	Rbm46	86	65.451	ENSONIG00000014096	rbm46	99	65.451	Oreochromis_niloticus
ENSRNOG00000025823	Rbm46	93	87.324	ENSOANG00000002141	RBM46	97	90.658	Ornithorhynchus_anatinus
ENSRNOG00000025823	Rbm46	100	98.499	ENSOCUG00000017859	RBM46	100	98.499	Oryctolagus_cuniculus
ENSRNOG00000025823	Rbm46	88	62.236	ENSORLG00000002429	rbm46	97	58.272	Oryzias_latipes
ENSRNOG00000025823	Rbm46	88	62.712	ENSORLG00020022154	rbm46	97	58.011	Oryzias_latipes_hni
ENSRNOG00000025823	Rbm46	88	62.605	ENSORLG00015020234	rbm46	94	63.291	Oryzias_latipes_hsok
ENSRNOG00000025823	Rbm46	83	62.749	ENSOMEG00000022580	rbm46	99	58.523	Oryzias_melastigma
ENSRNOG00000025823	Rbm46	100	98.499	ENSOGAG00000005647	RBM46	100	98.499	Otolemur_garnettii
ENSRNOG00000025823	Rbm46	100	97.561	ENSOARG00000016406	RBM46	100	97.561	Ovis_aries
ENSRNOG00000025823	Rbm46	88	98.077	ENSPPAG00000043236	RBM46	99	98.073	Pan_paniscus
ENSRNOG00000025823	Rbm46	100	97.749	ENSPPRG00000009416	RBM46	100	97.749	Panthera_pardus
ENSRNOG00000025823	Rbm46	100	97.749	ENSPTIG00000017449	RBM46	100	97.749	Panthera_tigris_altaica
ENSRNOG00000025823	Rbm46	88	98.077	ENSPTRG00000016538	RBM46	99	98.073	Pan_troglodytes
ENSRNOG00000025823	Rbm46	100	97.936	ENSPANG00000004186	RBM46	100	97.936	Papio_anubis
ENSRNOG00000025823	Rbm46	99	67.293	ENSPKIG00000015334	rbm46	92	67.293	Paramormyrops_kingsleyae
ENSRNOG00000025823	Rbm46	88	95.503	ENSPSIG00000006429	RBM46	95	95.503	Pelodiscus_sinensis
ENSRNOG00000025823	Rbm46	87	82.022	ENSPMGG00000019872	rbm46	94	82.022	Periophthalmus_magnuspinnatus
ENSRNOG00000025823	Rbm46	100	99.437	ENSPEMG00000013899	Rbm46	100	99.437	Peromyscus_maniculatus_bairdii
ENSRNOG00000025823	Rbm46	100	97.561	ENSPCIG00000029626	RBM46	100	97.561	Phascolarctos_cinereus
ENSRNOG00000025823	Rbm46	85	78.859	ENSPFOG00000001079	rbm46	97	79.661	Poecilia_formosa
ENSRNOG00000025823	Rbm46	99	57.143	ENSPLAG00000004541	rbm46	98	58.645	Poecilia_latipinna
ENSRNOG00000025823	Rbm46	91	62.048	ENSPMEG00000015724	rbm46	95	63.907	Poecilia_mexicana
ENSRNOG00000025823	Rbm46	94	60.735	ENSPREG00000014464	rbm46	95	66.667	Poecilia_reticulata
ENSRNOG00000025823	Rbm46	100	97.373	ENSPPYG00000015144	RBM46	100	97.373	Pongo_abelii
ENSRNOG00000025823	Rbm46	99	89.474	ENSPCAG00000003110	RBM46	99	90.226	Procavia_capensis
ENSRNOG00000025823	Rbm46	100	96.811	ENSPCOG00000024347	RBM46	100	96.811	Propithecus_coquereli
ENSRNOG00000025823	Rbm46	100	98.124	ENSPVAG00000008376	RBM46	100	98.124	Pteropus_vampyrus
ENSRNOG00000025823	Rbm46	96	64.353	ENSPNAG00000025312	rbm46	99	64.112	Pygocentrus_nattereri
ENSRNOG00000025823	Rbm46	88	96.795	ENSRBIG00000032583	RBM46	99	96.788	Rhinopithecus_bieti
ENSRNOG00000025823	Rbm46	88	97.009	ENSRROG00000044288	RBM46	99	97.002	Rhinopithecus_roxellana
ENSRNOG00000025823	Rbm46	100	96.811	ENSSBOG00000033028	RBM46	100	96.811	Saimiri_boliviensis_boliviensis
ENSRNOG00000025823	Rbm46	100	97.749	ENSSHAG00000012596	RBM46	100	97.749	Sarcophilus_harrisii
ENSRNOG00000025823	Rbm46	98	68.501	ENSSFOG00015000087	rbm46	98	67.932	Scleropages_formosus
ENSRNOG00000025823	Rbm46	87	62.635	ENSSMAG00000017042	rbm46	96	62.635	Scophthalmus_maximus
ENSRNOG00000025823	Rbm46	86	67.249	ENSSDUG00000020645	rbm46	89	67.467	Seriola_dumerili
ENSRNOG00000025823	Rbm46	100	97.936	ENSSARG00000006520	RBM46	100	97.936	Sorex_araneus
ENSRNOG00000025823	Rbm46	100	92.164	ENSSPUG00000012525	-	100	92.164	Sphenodon_punctatus
ENSRNOG00000025823	Rbm46	98	85.305	ENSSPUG00000004773	-	97	92.719	Sphenodon_punctatus
ENSRNOG00000025823	Rbm46	85	63.496	ENSSPAG00000013697	rbm46	94	63.496	Stegastes_partitus
ENSRNOG00000025823	Rbm46	88	98.291	ENSSSCG00000008994	RBM46	96	98.291	Sus_scrofa
ENSRNOG00000025823	Rbm46	88	84.797	ENSTGUG00000005307	RBM46	100	84.797	Taeniopygia_guttata
ENSRNOG00000025823	Rbm46	85	64.254	ENSTRUG00000004237	rbm46	91	64.254	Takifugu_rubripes
ENSRNOG00000025823	Rbm46	86	62.284	ENSTNIG00000008714	rbm46	95	57.795	Tetraodon_nigroviridis
ENSRNOG00000025823	Rbm46	100	93.621	ENSTBEG00000013949	RBM46	100	93.621	Tupaia_belangeri
ENSRNOG00000025823	Rbm46	100	95.872	ENSTTRG00000001239	RBM46	100	95.872	Tursiops_truncatus
ENSRNOG00000025823	Rbm46	100	98.311	ENSUAMG00000026593	RBM46	100	98.311	Ursus_americanus
ENSRNOG00000025823	Rbm46	100	98.124	ENSUMAG00000016442	RBM46	100	98.124	Ursus_maritimus
ENSRNOG00000025823	Rbm46	100	98.311	ENSVVUG00000024957	RBM46	100	98.311	Vulpes_vulpes
ENSRNOG00000025823	Rbm46	100	56.877	ENSXETG00000032344	-	100	56.877	Xenopus_tropicalis
ENSRNOG00000025823	Rbm46	100	74.672	ENSXETG00000022412	-	99	74.672	Xenopus_tropicalis
ENSRNOG00000025823	Rbm46	69	72.358	ENSXETG00000032067	-	100	71.816	Xenopus_tropicalis
ENSRNOG00000025823	Rbm46	84	65.359	ENSXMAG00000008237	rbm46	93	63.598	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001829	trophectodermal cell differentiation	-	IEA	Process
GO:0001829	trophectodermal cell differentiation	-	ISO	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0048255	mRNA stabilization	-	IEA	Process
GO:0048255	mRNA stabilization	-	ISO	Process