EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000025937 (Gene tree)
Gene ID: 367033
Gene Symbol: Zfp26
Alias: LOC367033|RGD1565847
Full Name: zinc finger protein 26
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 9762 bases
Position: chr8:21448618-21458379
Accession: 1565847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	1	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	2	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	3	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	4	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	5	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	6	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	7	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	8	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	9	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	10	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	11	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	12	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	13	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	14	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	15	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	16	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	17	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	18	19
ENSRNOP00000072254	zf-C2H2	PF00096.26	1.1e-120	19	19
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	1	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	2	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	3	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	4	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	5	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	6	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	7	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	8	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	9	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	10	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	11	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	12	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	13	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	14	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	15	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	16	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	17	18
ENSRNOP00000037843	zf-C2H2	PF00096.26	5.8e-119	18	18
ENSRNOP00000072254	zf-met	PF12874.7	9.7e-08	1	1
ENSRNOP00000037843	zf-met	PF12874.7	3.4e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000078192	-	3003	-	ENSRNOP00000072254	814 (aa)	-	A0A0G2K2I4
ENSRNOT00000038084	-	2871	XM_006242652	ENSRNOP00000037843	956 (aa)	XP_006242714	F1LMA0

Gene Model

Click here to download ENSRNOG00000025937's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000025937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000025937	Zfp26	75	48.980	ENSRNOG00000015701	Rreb1	54	35.714
ENSRNOG00000025937	Zfp26	75	41.447	ENSRNOG00000013586	Snai3	54	41.447
ENSRNOG00000025937	Zfp26	86	50.542	ENSRNOG00000029490	Znf768	59	50.360
ENSRNOG00000025937	Zfp26	88	54.098	ENSRNOG00000015188	AABR07053681.1	89	54.656
ENSRNOG00000025937	Zfp26	86	36.882	ENSRNOG00000013460	Zfp319	93	36.882
ENSRNOG00000025937	Zfp26	71	35.238	ENSRNOG00000016279	Zfp865	78	34.762
ENSRNOG00000025937	Zfp26	83	43.114	ENSRNOG00000010436	Zbtb17	61	40.365
ENSRNOG00000025937	Zfp26	99	48.832	ENSRNOG00000049259	LOC102549842	99	48.832
ENSRNOG00000025937	Zfp26	87	52.889	ENSRNOG00000003455	Zfp13	94	52.889
ENSRNOG00000025937	Zfp26	82	31.481	ENSRNOG00000014658	Zfp423	98	31.481
ENSRNOG00000025937	Zfp26	96	49.711	ENSRNOG00000022431	Zfp867	97	49.711
ENSRNOG00000025937	Zfp26	89	39.535	ENSRNOG00000007576	Zfp597	96	39.535
ENSRNOG00000025937	Zfp26	83	35.714	ENSRNOG00000008239	Repin1	83	35.938
ENSRNOG00000025937	Zfp26	89	45.395	ENSRNOG00000052406	LOC102552527	98	45.395
ENSRNOG00000025937	Zfp26	96	57.904	ENSRNOG00000048394	Zfp560	99	57.904
ENSRNOG00000025937	Zfp26	78	47.101	ENSRNOG00000024056	Zfp17	81	47.101
ENSRNOG00000025937	Zfp26	99	53.097	ENSRNOG00000014331	Zfp810	100	53.097
ENSRNOG00000025937	Zfp26	87	41.221	ENSRNOG00000023679	Prdm5	74	41.634
ENSRNOG00000025937	Zfp26	99	47.727	ENSRNOG00000006684	Zfp317	98	47.727
ENSRNOG00000025937	Zfp26	83	48.214	ENSRNOG00000027923	Mynn	56	47.525
ENSRNOG00000025937	Zfp26	87	51.636	ENSRNOG00000042777	Zfp28	64	51.636
ENSRNOG00000025937	Zfp26	99	51.220	ENSRNOG00000030308	Zfp251	96	51.220
ENSRNOG00000025937	Zfp26	96	50.980	ENSRNOG00000019059	Zfp1	99	50.980
ENSRNOG00000025937	Zfp26	89	47.122	ENSRNOG00000016417	Zfp136	99	47.122
ENSRNOG00000025937	Zfp26	91	53.414	ENSRNOG00000032625	AC118165.1	100	53.414
ENSRNOG00000025937	Zfp26	75	54.717	ENSRNOG00000050035	Sall4	53	54.717
ENSRNOG00000025937	Zfp26	75	46.429	ENSRNOG00000013907	Sall1	56	46.429
ENSRNOG00000025937	Zfp26	92	32.432	ENSRNOG00000028628	LOC100911196	79	30.281
ENSRNOG00000025937	Zfp26	82	32.727	ENSRNOG00000055761	Zfp574	93	35.912
ENSRNOG00000025937	Zfp26	86	45.777	ENSRNOG00000061533	AABR07001926.3	90	45.777
ENSRNOG00000025937	Zfp26	99	46.275	ENSRNOG00000019416	Zfp61	99	51.623
ENSRNOG00000025937	Zfp26	84	44.776	ENSRNOG00000047699	Snai2	56	44.776
ENSRNOG00000025937	Zfp26	85	45.714	ENSRNOG00000009594	Snai1	57	45.714
ENSRNOG00000025937	Zfp26	89	48.315	ENSRNOG00000043341	Zfp51	98	48.315
ENSRNOG00000025937	Zfp26	90	57.182	ENSRNOG00000030517	Zfp879	99	57.182
ENSRNOG00000025937	Zfp26	84	54.545	ENSRNOG00000014712	Zfp39	71	54.545
ENSRNOG00000025937	Zfp26	89	43.447	ENSRNOG00000002713	Zfp672	91	43.341

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000025937	Zfp26	99	77.736	ENSCAPG00000003129	-	95	77.736	Cavia_aperea
ENSRNOG00000025937	Zfp26	96	82.299	ENSCPOG00000034004	-	99	82.299	Cavia_porcellus
ENSRNOG00000025937	Zfp26	99	81.876	ENSCLAG00000012556	-	99	80.094	Chinchilla_lanigera
ENSRNOG00000025937	Zfp26	100	92.638	ENSCGRG00001000576	Zfp26	100	89.688	Cricetulus_griseus_chok1gshd
ENSRNOG00000025937	Zfp26	100	92.638	ENSCGRG00000010436	-	100	89.688	Cricetulus_griseus_crigri
ENSRNOG00000025937	Zfp26	95	91.860	ENSCGRG00000000280	-	95	91.860	Cricetulus_griseus_crigri
ENSRNOG00000025937	Zfp26	99	84.010	ENSDORG00000027564	Zfp26	99	78.964	Dipodomys_ordii
ENSRNOG00000025937	Zfp26	99	83.053	ENSFDAG00000009594	-	98	83.292	Fukomys_damarensis
ENSRNOG00000025937	Zfp26	97	82.614	ENSHGLG00000005362	-	87	81.062	Heterocephalus_glaber_female
ENSRNOG00000025937	Zfp26	98	81.977	ENSHGLG00100007268	-	100	81.657	Heterocephalus_glaber_male
ENSRNOG00000025937	Zfp26	100	84.758	ENSSTOG00000023536	-	100	82.276	Ictidomys_tridecemlineatus
ENSRNOG00000025937	Zfp26	100	88.589	ENSJJAG00000020082	-	100	88.283	Jaculus_jaculus
ENSRNOG00000025937	Zfp26	100	91.902	ENSMAUG00000017074	Zfp26	100	89.675	Mesocricetus_auratus
ENSRNOG00000025937	Zfp26	99	91.158	ENSMOCG00000015724	Zfp26	99	91.176	Microtus_ochrogaster
ENSRNOG00000025937	Zfp26	100	94.717	ENSMUSG00000063108	Zfp26	100	92.492	Mus_musculus
ENSRNOG00000025937	Zfp26	100	89.816	ENSNGAG00000020695	Zfp26	100	86.458	Nannospalax_galili
ENSRNOG00000025937	Zfp26	99	80.467	ENSODEG00000016460	-	98	80.706	Octodon_degus
ENSRNOG00000025937	Zfp26	99	65.116	ENSOCUG00000029276	-	99	65.116	Oryctolagus_cuniculus
ENSRNOG00000025937	Zfp26	100	93.742	ENSPEMG00000016507	Zfp26	100	91.155	Peromyscus_maniculatus_bairdii

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function