EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000026085 (Gene tree)
Gene ID: 360720
Gene Symbol: Rabl3
Alias: LOC360720
Full Name: RAB%2C member of RAS oncogene family-like 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 29035 bases
Position: chr11:66049635-66078669
Accession: 1306436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000033847	MMR_HSR1	PF01926.23	4.8e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000031741	-	1961	-	ENSRNOP00000033847	236 (aa)	-	D4A1C1

Gene Model

Click here to download ENSRNOG00000026085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000026085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000026085	Rabl3	57	32.143	ENSRNOG00000006698	Rab33a	53	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000026085	Rabl3	100	92.373	ENSG00000144840	RABL3	100	95.349	Homo_sapiens
ENSRNOG00000026085	Rabl3	100	83.122	ENSAPOG00000024479	rabl3	100	83.122	Acanthochromis_polyacanthus
ENSRNOG00000026085	Rabl3	100	94.068	ENSAMEG00000004809	RABL3	100	94.068	Ailuropoda_melanoleuca
ENSRNOG00000026085	Rabl3	100	80.085	ENSACIG00000014343	rabl3	100	80.085	Amphilophus_citrinellus
ENSRNOG00000026085	Rabl3	100	83.122	ENSAOCG00000011851	rabl3	100	83.122	Amphiprion_ocellaris
ENSRNOG00000026085	Rabl3	100	83.122	ENSAPEG00000011214	rabl3	100	83.122	Amphiprion_percula
ENSRNOG00000026085	Rabl3	100	83.475	ENSATEG00000003503	rabl3	95	89.109	Anabas_testudineus
ENSRNOG00000026085	Rabl3	99	87.179	ENSACAG00000011313	-	99	87.179	Anolis_carolinensis
ENSRNOG00000026085	Rabl3	100	94.068	ENSANAG00000027278	RABL3	100	94.068	Aotus_nancymaae
ENSRNOG00000026085	Rabl3	100	82.627	ENSACLG00000009820	rabl3	100	82.627	Astatotilapia_calliptera
ENSRNOG00000026085	Rabl3	100	83.475	ENSAMXG00000038716	rabl3	100	83.475	Astyanax_mexicanus
ENSRNOG00000026085	Rabl3	100	93.644	ENSBTAG00000015898	RABL3	100	93.644	Bos_taurus
ENSRNOG00000026085	Rabl3	100	94.068	ENSCJAG00000008611	RABL3	100	94.068	Callithrix_jacchus
ENSRNOG00000026085	Rabl3	100	94.492	ENSCAFG00000011292	RABL3	89	94.492	Canis_familiaris
ENSRNOG00000026085	Rabl3	100	94.492	ENSCAFG00020006397	RABL3	100	94.492	Canis_lupus_dingo
ENSRNOG00000026085	Rabl3	100	93.644	ENSCHIG00000017365	RABL3	100	93.644	Capra_hircus
ENSRNOG00000026085	Rabl3	100	91.949	ENSCPOG00000009645	RABL3	100	91.949	Cavia_porcellus
ENSRNOG00000026085	Rabl3	100	92.797	ENSCATG00000032561	RABL3	100	92.797	Cercocebus_atys
ENSRNOG00000026085	Rabl3	100	91.525	ENSCLAG00000010855	RABL3	100	91.525	Chinchilla_lanigera
ENSRNOG00000026085	Rabl3	99	92.704	ENSCSAG00000007155	RABL3	100	92.704	Chlorocebus_sabaeus
ENSRNOG00000026085	Rabl3	100	92.373	ENSCPBG00000001999	RABL3	100	92.373	Chrysemys_picta_bellii
ENSRNOG00000026085	Rabl3	100	92.797	ENSCANG00000031684	RABL3	100	92.797	Colobus_angolensis_palliatus
ENSRNOG00000026085	Rabl3	100	97.458	ENSCGRG00001021537	Rabl3	100	97.458	Cricetulus_griseus_chok1gshd
ENSRNOG00000026085	Rabl3	100	97.458	ENSCGRG00000002114	Rabl3	100	97.458	Cricetulus_griseus_crigri
ENSRNOG00000026085	Rabl3	100	72.458	ENSCSEG00000014982	rabl3	100	72.458	Cynoglossus_semilaevis
ENSRNOG00000026085	Rabl3	100	70.339	ENSCVAG00000009904	rabl3	100	70.339	Cyprinodon_variegatus
ENSRNOG00000026085	Rabl3	100	81.356	ENSDARG00000040959	rabl3	93	89.844	Danio_rerio
ENSRNOG00000026085	Rabl3	100	92.373	ENSDNOG00000008174	RABL3	100	92.373	Dasypus_novemcinctus
ENSRNOG00000026085	Rabl3	100	93.644	ENSETEG00000010206	RABL3	100	93.644	Echinops_telfairi
ENSRNOG00000026085	Rabl3	100	94.068	ENSECAG00000023059	RABL3	100	94.068	Equus_caballus
ENSRNOG00000026085	Rabl3	100	86.441	ENSEEUG00000002897	RABL3	100	86.441	Erinaceus_europaeus
ENSRNOG00000026085	Rabl3	100	81.356	ENSELUG00000014758	rabl3	100	81.356	Esox_lucius
ENSRNOG00000026085	Rabl3	100	94.492	ENSFCAG00000031879	RABL3	100	85.169	Felis_catus
ENSRNOG00000026085	Rabl3	100	90.678	ENSFALG00000005296	RABL3	100	90.678	Ficedula_albicollis
ENSRNOG00000026085	Rabl3	100	91.949	ENSFDAG00000000307	RABL3	100	91.949	Fukomys_damarensis
ENSRNOG00000026085	Rabl3	100	81.780	ENSFHEG00000011273	rabl3	100	81.780	Fundulus_heteroclitus
ENSRNOG00000026085	Rabl3	100	80.932	ENSGMOG00000007845	rabl3	100	80.932	Gadus_morhua
ENSRNOG00000026085	Rabl3	100	91.525	ENSGALG00000014949	RABL3	100	91.525	Gallus_gallus
ENSRNOG00000026085	Rabl3	100	80.508	ENSGAFG00000015953	rabl3	100	80.508	Gambusia_affinis
ENSRNOG00000026085	Rabl3	100	81.780	ENSGACG00000007387	rabl3	100	89.147	Gasterosteus_aculeatus
ENSRNOG00000026085	Rabl3	100	92.373	ENSGAGG00000003677	RABL3	100	92.373	Gopherus_agassizii
ENSRNOG00000026085	Rabl3	100	92.373	ENSGGOG00000006059	RABL3	100	92.373	Gorilla_gorilla
ENSRNOG00000026085	Rabl3	100	83.051	ENSHBUG00000019478	rabl3	93	83.051	Haplochromis_burtoni
ENSRNOG00000026085	Rabl3	100	91.102	ENSHGLG00000014491	RABL3	100	91.102	Heterocephalus_glaber_female
ENSRNOG00000026085	Rabl3	100	91.102	ENSHGLG00100004866	RABL3	100	91.102	Heterocephalus_glaber_male
ENSRNOG00000026085	Rabl3	75	88.764	ENSHCOG00000019245	rabl3	91	88.764	Hippocampus_comes
ENSRNOG00000026085	Rabl3	100	84.322	ENSIPUG00000012657	rabl3	100	84.322	Ictalurus_punctatus
ENSRNOG00000026085	Rabl3	100	91.949	ENSSTOG00000019452	RABL3	100	91.949	Ictidomys_tridecemlineatus
ENSRNOG00000026085	Rabl3	100	83.475	ENSJJAG00000023553	Rabl3	100	83.475	Jaculus_jaculus
ENSRNOG00000026085	Rabl3	100	77.119	ENSKMAG00000015464	rabl3	100	77.119	Kryptolebias_marmoratus
ENSRNOG00000026085	Rabl3	100	83.122	ENSLBEG00000020595	rabl3	100	83.122	Labrus_bergylta
ENSRNOG00000026085	Rabl3	100	83.122	ENSLBEG00000010627	-	100	83.122	Labrus_bergylta
ENSRNOG00000026085	Rabl3	100	87.288	ENSLOCG00000006265	rabl3	100	87.288	Lepisosteus_oculatus
ENSRNOG00000026085	Rabl3	100	91.949	ENSLAFG00000003711	RABL3	100	91.949	Loxodonta_africana
ENSRNOG00000026085	Rabl3	100	92.797	ENSMFAG00000031923	RABL3	100	92.797	Macaca_fascicularis
ENSRNOG00000026085	Rabl3	100	83.475	ENSMMUG00000001594	RABL3	100	83.475	Macaca_mulatta
ENSRNOG00000026085	Rabl3	100	92.797	ENSMNEG00000043980	RABL3	100	92.797	Macaca_nemestrina
ENSRNOG00000026085	Rabl3	100	92.797	ENSMLEG00000028177	RABL3	100	92.797	Mandrillus_leucophaeus
ENSRNOG00000026085	Rabl3	100	83.051	ENSMAMG00000015155	rabl3	100	83.051	Mastacembelus_armatus
ENSRNOG00000026085	Rabl3	100	82.627	ENSMZEG00005002607	rabl3	100	82.627	Maylandia_zebra
ENSRNOG00000026085	Rabl3	100	97.458	ENSMAUG00000013022	Rabl3	100	97.458	Mesocricetus_auratus
ENSRNOG00000026085	Rabl3	100	94.068	ENSMICG00000049288	RABL3	100	94.068	Microcebus_murinus
ENSRNOG00000026085	Rabl3	100	95.763	ENSMOCG00000015237	Rabl3	100	95.763	Microtus_ochrogaster
ENSRNOG00000026085	Rabl3	100	79.661	ENSMMOG00000005628	rabl3	100	79.661	Mola_mola
ENSRNOG00000026085	Rabl3	100	88.136	ENSMODG00000018232	RABL3	100	88.136	Monodelphis_domestica
ENSRNOG00000026085	Rabl3	100	77.824	ENSMALG00000018837	rabl3	100	77.824	Monopterus_albus
ENSRNOG00000026085	Rabl3	100	99.153	MGP_CAROLIEiJ_G0020728	Rabl3	100	100.000	Mus_caroli
ENSRNOG00000026085	Rabl3	100	99.153	ENSMUSG00000022827	Rabl3	100	100.000	Mus_musculus
ENSRNOG00000026085	Rabl3	100	98.305	MGP_PahariEiJ_G0016429	Rabl3	100	100.000	Mus_pahari
ENSRNOG00000026085	Rabl3	100	99.153	MGP_SPRETEiJ_G0021628	Rabl3	100	100.000	Mus_spretus
ENSRNOG00000026085	Rabl3	100	94.492	ENSMPUG00000008257	RABL3	89	94.492	Mustela_putorius_furo
ENSRNOG00000026085	Rabl3	100	90.254	ENSMLUG00000014113	RABL3	100	90.254	Myotis_lucifugus
ENSRNOG00000026085	Rabl3	98	84.483	ENSNGAG00000001939	Rabl3	100	84.483	Nannospalax_galili
ENSRNOG00000026085	Rabl3	92	86.574	ENSNBRG00000012423	rabl3	92	86.574	Neolamprologus_brichardi
ENSRNOG00000026085	Rabl3	100	92.797	ENSNLEG00000031723	RABL3	100	92.797	Nomascus_leucogenys
ENSRNOG00000026085	Rabl3	100	89.831	ENSMEUG00000006606	RABL3	100	89.831	Notamacropus_eugenii
ENSRNOG00000026085	Rabl3	100	90.678	ENSODEG00000004758	-	100	90.678	Octodon_degus
ENSRNOG00000026085	Rabl3	100	83.475	ENSONIG00000004281	rabl3	100	83.475	Oreochromis_niloticus
ENSRNOG00000026085	Rabl3	99	88.462	ENSOANG00000003928	RABL3	99	88.462	Ornithorhynchus_anatinus
ENSRNOG00000026085	Rabl3	100	82.203	ENSORLG00000020457	rabl3	100	82.203	Oryzias_latipes
ENSRNOG00000026085	Rabl3	100	82.203	ENSORLG00020008991	rabl3	100	79.661	Oryzias_latipes_hni
ENSRNOG00000026085	Rabl3	100	82.203	ENSORLG00015005649	rabl3	88	82.203	Oryzias_latipes_hsok
ENSRNOG00000026085	Rabl3	100	82.627	ENSOMEG00000015066	rabl3	100	82.627	Oryzias_melastigma
ENSRNOG00000026085	Rabl3	100	94.068	ENSOGAG00000005961	RABL3	100	94.068	Otolemur_garnettii
ENSRNOG00000026085	Rabl3	100	93.644	ENSOARG00000019939	RABL3	100	93.644	Ovis_aries
ENSRNOG00000026085	Rabl3	94	91.441	ENSPPAG00000036997	RABL3	87	91.441	Pan_paniscus
ENSRNOG00000026085	Rabl3	100	94.492	ENSPPRG00000016325	RABL3	100	94.492	Panthera_pardus
ENSRNOG00000026085	Rabl3	100	94.492	ENSPTIG00000018021	RABL3	100	94.492	Panthera_tigris_altaica
ENSRNOG00000026085	Rabl3	100	92.373	ENSPTRG00000015272	RABL3	100	92.373	Pan_troglodytes
ENSRNOG00000026085	Rabl3	100	92.797	ENSPANG00000001339	RABL3	100	92.797	Papio_anubis
ENSRNOG00000026085	Rabl3	100	83.898	ENSPKIG00000007818	rabl3	100	83.898	Paramormyrops_kingsleyae
ENSRNOG00000026085	Rabl3	100	91.525	ENSPSIG00000011358	RABL3	100	91.525	Pelodiscus_sinensis
ENSRNOG00000026085	Rabl3	100	80.508	ENSPMGG00000015794	rabl3	100	80.508	Periophthalmus_magnuspinnatus
ENSRNOG00000026085	Rabl3	100	97.458	ENSPEMG00000016913	Rabl3	100	97.458	Peromyscus_maniculatus_bairdii
ENSRNOG00000026085	Rabl3	100	90.254	ENSPCIG00000018922	RABL3	100	90.254	Phascolarctos_cinereus
ENSRNOG00000026085	Rabl3	100	80.932	ENSPFOG00000008586	rabl3	100	80.932	Poecilia_formosa
ENSRNOG00000026085	Rabl3	100	80.932	ENSPLAG00000014482	rabl3	100	80.932	Poecilia_latipinna
ENSRNOG00000026085	Rabl3	100	80.932	ENSPMEG00000002295	rabl3	100	80.932	Poecilia_mexicana
ENSRNOG00000026085	Rabl3	100	80.932	ENSPREG00000014815	rabl3	100	80.932	Poecilia_reticulata
ENSRNOG00000026085	Rabl3	100	92.797	ENSPPYG00000013501	RABL3	100	92.797	Pongo_abelii
ENSRNOG00000026085	Rabl3	100	94.492	ENSPCOG00000022230	RABL3	100	94.492	Propithecus_coquereli
ENSRNOG00000026085	Rabl3	100	91.525	ENSPVAG00000010013	RABL3	100	91.525	Pteropus_vampyrus
ENSRNOG00000026085	Rabl3	100	83.051	ENSPNYG00000006659	rabl3	100	83.051	Pundamilia_nyererei
ENSRNOG00000026085	Rabl3	100	83.898	ENSPNAG00000000748	rabl3	100	83.898	Pygocentrus_nattereri
ENSRNOG00000026085	Rabl3	100	92.797	ENSRBIG00000040941	RABL3	100	92.797	Rhinopithecus_bieti
ENSRNOG00000026085	Rabl3	100	92.797	ENSRROG00000043745	RABL3	100	92.797	Rhinopithecus_roxellana
ENSRNOG00000026085	Rabl3	100	94.068	ENSSBOG00000004022	RABL3	100	94.068	Saimiri_boliviensis_boliviensis
ENSRNOG00000026085	Rabl3	100	90.678	ENSSHAG00000012233	RABL3	100	90.678	Sarcophilus_harrisii
ENSRNOG00000026085	Rabl3	100	85.169	ENSSFOG00015010171	rabl3	100	85.169	Scleropages_formosus
ENSRNOG00000026085	Rabl3	100	81.857	ENSSMAG00000002403	rabl3	100	81.857	Scophthalmus_maximus
ENSRNOG00000026085	Rabl3	100	83.475	ENSSDUG00000012078	rabl3	100	83.475	Seriola_dumerili
ENSRNOG00000026085	Rabl3	100	83.898	ENSSLDG00000021899	rabl3	100	83.898	Seriola_lalandi_dorsalis
ENSRNOG00000026085	Rabl3	100	94.492	ENSSARG00000008316	RABL3	100	94.492	Sorex_araneus
ENSRNOG00000026085	Rabl3	100	90.678	ENSSPUG00000017490	RABL3	100	90.678	Sphenodon_punctatus
ENSRNOG00000026085	Rabl3	100	83.051	ENSSPAG00000011642	rabl3	100	83.051	Stegastes_partitus
ENSRNOG00000026085	Rabl3	100	94.068	ENSSSCG00000035258	RABL3	100	94.068	Sus_scrofa
ENSRNOG00000026085	Rabl3	100	90.678	ENSTGUG00000013374	RABL3	100	90.678	Taeniopygia_guttata
ENSRNOG00000026085	Rabl3	79	86.096	ENSTRUG00000007846	RABL3	100	91.406	Takifugu_rubripes
ENSRNOG00000026085	Rabl3	100	78.814	ENSTBEG00000005153	RABL3	100	78.814	Tupaia_belangeri
ENSRNOG00000026085	Rabl3	100	93.644	ENSUAMG00000005299	RABL3	100	93.644	Ursus_americanus
ENSRNOG00000026085	Rabl3	100	93.220	ENSUMAG00000025256	RABL3	89	93.220	Ursus_maritimus
ENSRNOG00000026085	Rabl3	100	94.068	ENSVPAG00000003776	RABL3	100	94.068	Vicugna_pacos
ENSRNOG00000026085	Rabl3	100	94.492	ENSVVUG00000022300	RABL3	89	94.492	Vulpes_vulpes
ENSRNOG00000026085	Rabl3	100	80.932	ENSXMAG00000003244	rabl3	100	80.932	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005623	cell	-	IEA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process