EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000026116 (Gene tree)
Gene ID
364910
Gene Symbol
Sall3
Alias
LOC364910
Full Name
spalt-like transcription factor 3
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
6268 bases
Position
chr18:77573702-77579969
Accession
1310232
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000037246zf-C2H2PF00096.263.1e-3315
ENSRNOP00000037246zf-C2H2PF00096.263.1e-3325
ENSRNOP00000037246zf-C2H2PF00096.263.1e-3335
ENSRNOP00000037246zf-C2H2PF00096.263.1e-3345
ENSRNOP00000037246zf-C2H2PF00096.263.1e-3355
ENSRNOP00000037246zf-metPF12874.73.3e-2112
ENSRNOP00000037246zf-metPF12874.73.3e-2122
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000034896-4889XM_006254985ENSRNOP000000372461190 (aa)XP_006255047D4A024
Gene Model
Click here to download ENSRNOG00000026116's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000026116's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000026116Sall35546.296ENSRNOG00000048394Zfp5607047.170
ENSRNOG00000026116Sall39757.179ENSRNOG00000013907Sall18656.186
ENSRNOG00000026116Sall35550.000ENSRNOG00000006684Zfp3178150.000
ENSRNOG00000026116Sall36963.462ENSRNOG00000050035Sall49563.462
ENSRNOG00000026116Sall35149.091ENSRNOG00000032625AC118165.110043.636
ENSRNOG00000026116Sall35546.809ENSRNOG00000016417Zfp1368446.809
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000026116Sall39793.774ENSG00000256463SALL39893.774Homo_sapiens
ENSRNOG00000026116Sall39963.569ENSAPOG00000004264sall3b8763.569Acanthochromis_polyacanthus
ENSRNOG00000026116Sall38065.249ENSAPOG00000020922sall3a8578.656Acanthochromis_polyacanthus
ENSRNOG00000026116Sall39879.661ENSAMEG00000010206SALL38980.670Ailuropoda_melanoleuca
ENSRNOG00000026116Sall38063.462ENSACIG00000019407sall3b9165.234Amphilophus_citrinellus
ENSRNOG00000026116Sall37978.824ENSACIG00000014041sall3a9178.824Amphilophus_citrinellus
ENSRNOG00000026116Sall39960.902ENSAOCG00000012779sall3b8665.289Amphiprion_ocellaris
ENSRNOG00000026116Sall39761.224ENSAOCG00000010863sall3a8978.656Amphiprion_ocellaris
ENSRNOG00000026116Sall37866.390ENSAPEG00000018170sall3b9266.116Amphiprion_percula
ENSRNOG00000026116Sall39678.656ENSAPEG00000019278sall3a8678.656Amphiprion_percula
ENSRNOG00000026116Sall39755.771ENSATEG00000024524sall3a9367.451Anabas_testudineus
ENSRNOG00000026116Sall37766.116ENSATEG00000004914sall3b8663.462Anabas_testudineus
ENSRNOG00000026116Sall39869.856ENSAPLG00000013214SALL38969.513Anas_platyrhynchos
ENSRNOG00000026116Sall39867.875ENSACAG00000000478SALL38767.833Anolis_carolinensis
ENSRNOG00000026116Sall310082.092ENSANAG00000032412SALL38883.549Aotus_nancymaae
ENSRNOG00000026116Sall37978.824ENSACLG00000022451sall3a9378.824Astatotilapia_calliptera
ENSRNOG00000026116Sall38062.132ENSACLG00000001619sall3b8663.462Astatotilapia_calliptera
ENSRNOG00000026116Sall36764.609ENSAMXG00000035442sall3b7664.609Astyanax_mexicanus
ENSRNOG00000026116Sall37878.824ENSAMXG00000011185sall3a8878.824Astyanax_mexicanus
ENSRNOG00000026116Sall39778.902ENSBTAG00000050200SALL39087.549Bos_taurus
ENSRNOG00000026116Sall39690.661ENSCJAG00000007332SALL38790.661Callithrix_jacchus
ENSRNOG00000026116Sall39991.829ENSCAFG00000000013SALL39791.829Canis_familiaris
ENSRNOG00000026116Sall310080.696ENSCAFG00020015092SALL39781.942Canis_lupus_dingo
ENSRNOG00000026116Sall39779.056ENSCHIG00000000145SALL38879.777Capra_hircus
ENSRNOG00000026116Sall38184.871ENSTSYG00000028846SALL39484.871Carlito_syrichta
ENSRNOG00000026116Sall39092.695ENSCAPG00000006496SALL38691.513Cavia_aperea
ENSRNOG00000026116Sall39991.513ENSCPOG00000008546SALL38891.513Cavia_porcellus
ENSRNOG00000026116Sall39787.454ENSCCAG00000034863SALL38787.454Cebus_capucinus
ENSRNOG00000026116Sall39789.299ENSCATG00000029727SALL38884.364Cercocebus_atys
ENSRNOG00000026116Sall39890.775ENSCLAG00000007727SALL39290.775Chinchilla_lanigera
ENSRNOG00000026116Sall39783.607ENSCSAG00000018244SALL38884.563Chlorocebus_sabaeus
ENSRNOG00000026116Sall37381.618ENSCHOG00000013939-9180.515Choloepus_hoffmanni
ENSRNOG00000026116Sall39880.405ENSCPBG00000003657SALL38780.308Chrysemys_picta_bellii
ENSRNOG00000026116Sall38080.785ENSCANG00000030302SALL39380.395Colobus_angolensis_palliatus
ENSRNOG00000026116Sall39998.444ENSCGRG00001018203Sall38998.444Cricetulus_griseus_chok1gshd
ENSRNOG00000026116Sall39996.887ENSCGRG00000017127Sall39196.887Cricetulus_griseus_crigri
ENSRNOG00000026116Sall38063.462ENSCSEG00000009569sall3b9263.462Cynoglossus_semilaevis
ENSRNOG00000026116Sall39758.717ENSCSEG00000009058sall3a8655.186Cynoglossus_semilaevis
ENSRNOG00000026116Sall37563.514ENSCVAG00000017005sall3b8669.767Cyprinodon_variegatus
ENSRNOG00000026116Sall38076.863ENSCVAG00000009684sall3a8876.863Cyprinodon_variegatus
ENSRNOG00000026116Sall39875.686ENSDARG00000079613sall3a8675.686Danio_rerio
ENSRNOG00000026116Sall39664.754ENSDARG00000057586sall3b8649.036Danio_rerio
ENSRNOG00000026116Sall39181.573ENSDNOG00000025483SALL39981.474Dasypus_novemcinctus
ENSRNOG00000026116Sall38088.947ENSDORG00000002702Sall39188.583Dipodomys_ordii
ENSRNOG00000026116Sall38777.682ENSETEG00000001481SALL39977.395Echinops_telfairi
ENSRNOG00000026116Sall39891.051ENSEASG00005002071SALL38791.051Equus_asinus_asinus
ENSRNOG00000026116Sall39890.661ENSECAG00000015414SALL38790.661Equus_caballus
ENSRNOG00000026116Sall39763.462ENSELUG00000009541sall3b8563.462Esox_lucius
ENSRNOG00000026116Sall38076.800ENSELUG00000020351sall3a8860.709Esox_lucius
ENSRNOG00000026116Sall39989.105ENSFCAG00000028839SALL38789.105Felis_catus
ENSRNOG00000026116Sall39869.958ENSFALG00000013343SALL38968.186Ficedula_albicollis
ENSRNOG00000026116Sall39790.775ENSFDAG00000014697SALL38790.775Fukomys_damarensis
ENSRNOG00000026116Sall37961.036ENSGMOG00000006649sall3a8855.768Gadus_morhua
ENSRNOG00000026116Sall39881.319ENSGALG00000041404SALL38780.717Gallus_gallus
ENSRNOG00000026116Sall39843.064ENSGAFG00000014435-8661.538Gambusia_affinis
ENSRNOG00000026116Sall39761.125ENSGAFG00000001581sall3a9076.863Gambusia_affinis
ENSRNOG00000026116Sall39759.144ENSGACG00000002533sall3b8759.922Gasterosteus_aculeatus
ENSRNOG00000026116Sall39762.479ENSGACG00000005503sall3a8861.725Gasterosteus_aculeatus
ENSRNOG00000026116Sall39868.898ENSGAGG00000000925SALL38768.579Gopherus_agassizii
ENSRNOG00000026116Sall39793.385ENSGGOG00000008127SALL38793.385Gorilla_gorilla
ENSRNOG00000026116Sall37965.748ENSHBUG00000018127sall3b9165.490Haplochromis_burtoni
ENSRNOG00000026116Sall37878.824ENSHBUG00000004486sall3a8678.824Haplochromis_burtoni
ENSRNOG00000026116Sall39791.513ENSHGLG00000000824SALL38691.513Heterocephalus_glaber_female
ENSRNOG00000026116Sall39791.513ENSHGLG00100008694SALL38691.513Heterocephalus_glaber_male
ENSRNOG00000026116Sall39774.539ENSHCOG00000010423sall3a8575.277Hippocampus_comes
ENSRNOG00000026116Sall39763.462ENSHCOG00000004745sall3b7763.462Hippocampus_comes
ENSRNOG00000026116Sall39763.462ENSIPUG00000003006sall3b8763.462Ictalurus_punctatus
ENSRNOG00000026116Sall38080.488ENSIPUG00000003378sall38655.913Ictalurus_punctatus
ENSRNOG00000026116Sall39994.942ENSSTOG00000004145SALL38794.942Ictidomys_tridecemlineatus
ENSRNOG00000026116Sall39792.083ENSJJAG00000014351Sall38891.581Jaculus_jaculus
ENSRNOG00000026116Sall39777.953ENSKMAG00000003846sall3a9277.953Kryptolebias_marmoratus
ENSRNOG00000026116Sall37863.462ENSKMAG00000012418sall3b8763.462Kryptolebias_marmoratus
ENSRNOG00000026116Sall38050.511ENSLBEG00000015706sall3b9053.886Labrus_bergylta
ENSRNOG00000026116Sall37978.431ENSLBEG00000005152sall3a8678.431Labrus_bergylta
ENSRNOG00000026116Sall39982.558ENSLOCG00000007831sall3a8682.558Lepisosteus_oculatus
ENSRNOG00000026116Sall310080.901ENSLAFG00000013521SALL39280.333Loxodonta_africana
ENSRNOG00000026116Sall38289.630ENSMFAG00000031402SALL37889.425Macaca_fascicularis
ENSRNOG00000026116Sall39788.930ENSMMUG00000000286SALL38882.616Macaca_mulatta
ENSRNOG00000026116Sall38289.712ENSMNEG00000029916SALL38883.849Macaca_nemestrina
ENSRNOG00000026116Sall38064.173ENSMAMG00000006101sall3b9064.173Mastacembelus_armatus
ENSRNOG00000026116Sall38066.837ENSMAMG00000001276sall3a8662.217Mastacembelus_armatus
ENSRNOG00000026116Sall38062.500ENSMZEG00005026224sall3b8663.462Maylandia_zebra
ENSRNOG00000026116Sall37978.824ENSMZEG00005007586sall3a9378.824Maylandia_zebra
ENSRNOG00000026116Sall39869.705ENSMGAG00000002297SALL38769.283Meleagris_gallopavo
ENSRNOG00000026116Sall39998.444ENSMAUG00000011828Sall38998.444Mesocricetus_auratus
ENSRNOG00000026116Sall38192.218ENSMICG00000017395SALL39092.218Microcebus_murinus
ENSRNOG00000026116Sall39998.833ENSMOCG00000013205Sall38998.833Microtus_ochrogaster
ENSRNOG00000026116Sall38063.462ENSMMOG00000014246sall3b9153.209Mola_mola
ENSRNOG00000026116Sall38059.898ENSMMOG00000003253sall3a9259.734Mola_mola
ENSRNOG00000026116Sall39887.454ENSMODG00000012231SALL38787.454Monodelphis_domestica
ENSRNOG00000026116Sall39756.230ENSMALG00000003343sall3a8856.230Monopterus_albus
ENSRNOG00000026116Sall37952.025ENSMALG00000015200sall3b8649.094Monopterus_albus
ENSRNOG00000026116Sall39999.222MGP_CAROLIEiJ_G0022442Sall38999.222Mus_caroli
ENSRNOG00000026116Sall39998.444ENSMUSG00000024565Sall38998.444Mus_musculus
ENSRNOG00000026116Sall39999.222MGP_PahariEiJ_G0019170Sall38999.222Mus_pahari
ENSRNOG00000026116Sall39999.222MGP_SPRETEiJ_G0023357Sall38999.222Mus_spretus
ENSRNOG00000026116Sall39593.500ENSMPUG00000016646SALL39693.500Mustela_putorius_furo
ENSRNOG00000026116Sall310081.607ENSMLUG00000010582SALL38982.393Myotis_lucifugus
ENSRNOG00000026116Sall39998.444ENSNGAG00000023772Sall38998.444Nannospalax_galili
ENSRNOG00000026116Sall38066.224ENSNBRG00000008974sall3a8861.097Neolamprologus_brichardi
ENSRNOG00000026116Sall37964.567ENSNBRG00000016034sall3b9154.076Neolamprologus_brichardi
ENSRNOG00000026116Sall39789.299ENSNLEG00000008217SALL39087.823Nomascus_leucogenys
ENSRNOG00000026116Sall39786.844ENSODEG00000002692SALL39085.870Octodon_degus
ENSRNOG00000026116Sall38066.496ENSONIG00000007305sall3a8662.144Oreochromis_niloticus
ENSRNOG00000026116Sall35982.657ENSOANG00000010135-10082.675Ornithorhynchus_anatinus
ENSRNOG00000026116Sall39691.304ENSOCUG00000029398SALL39891.304Oryctolagus_cuniculus
ENSRNOG00000026116Sall39756.192ENSOCUG00000004364-8156.818Oryctolagus_cuniculus
ENSRNOG00000026116Sall35863.462ENSORLG00000024765-8863.462Oryzias_latipes
ENSRNOG00000026116Sall39676.863ENSORLG00000020718sall3a8676.863Oryzias_latipes
ENSRNOG00000026116Sall39760.083ENSORLG00020001794sall3a8776.471Oryzias_latipes_hni
ENSRNOG00000026116Sall39363.462ENSORLG00020015105sall3b7163.462Oryzias_latipes_hni
ENSRNOG00000026116Sall39760.165ENSORLG00015018152sall3a9177.075Oryzias_latipes_hsok
ENSRNOG00000026116Sall38371.895ENSORLG00015005877sall3b8872.449Oryzias_latipes_hsok
ENSRNOG00000026116Sall39677.647ENSOMEG00000011390sall3a8677.647Oryzias_melastigma
ENSRNOG00000026116Sall39783.890ENSOGAG00000031681SALL38883.591Otolemur_garnettii
ENSRNOG00000026116Sall38279.394ENSOARG00000004353SALL38879.477Ovis_aries
ENSRNOG00000026116Sall38288.434ENSPPAG00000029586-10088.275Pan_paniscus
ENSRNOG00000026116Sall39793.774ENSPTRG00000010126SALL38793.774Pan_troglodytes
ENSRNOG00000026116Sall39783.607ENSPANG00000006485SALL38984.278Papio_anubis
ENSRNOG00000026116Sall39380.420ENSPKIG00000013427sall3a8380.420Paramormyrops_kingsleyae
ENSRNOG00000026116Sall39961.488ENSPKIG00000018271SALL39061.623Paramormyrops_kingsleyae
ENSRNOG00000026116Sall39769.494ENSPSIG00000008556SALL39668.076Pelodiscus_sinensis
ENSRNOG00000026116Sall37958.333ENSPMGG00000002913sall3b7961.538Periophthalmus_magnuspinnatus
ENSRNOG00000026116Sall39959.673ENSPMGG00000017042sall3a8673.881Periophthalmus_magnuspinnatus
ENSRNOG00000026116Sall310095.798ENSPEMG00000022799Sall39095.798Peromyscus_maniculatus_bairdii
ENSRNOG00000026116Sall39887.085ENSPCIG00000002472SALL38787.085Phascolarctos_cinereus
ENSRNOG00000026116Sall39677.344ENSPFOG00000019127sall3a8677.344Poecilia_formosa
ENSRNOG00000026116Sall37663.462ENSPFOG00000013292sall3b9263.462Poecilia_formosa
ENSRNOG00000026116Sall39677.344ENSPLAG00000018123sall3a9177.255Poecilia_latipinna
ENSRNOG00000026116Sall37663.462ENSPLAG00000013919sall3b8763.462Poecilia_latipinna
ENSRNOG00000026116Sall37563.462ENSPMEG00000023703sall3b8463.462Poecilia_mexicana
ENSRNOG00000026116Sall38573.451ENSPMEG00000014946sall3a8473.451Poecilia_mexicana
ENSRNOG00000026116Sall39561.538ENSPREG00000015079sall3b8461.538Poecilia_reticulata
ENSRNOG00000026116Sall38473.451ENSPREG00000014420sall3a8373.451Poecilia_reticulata
ENSRNOG00000026116Sall39789.299ENSPPYG00000009253SALL38989.299Pongo_abelii
ENSRNOG00000026116Sall310080.467ENSPCAG00000006522SALL39081.624Procavia_capensis
ENSRNOG00000026116Sall38092.218ENSPCOG00000012553SALL39092.218Propithecus_coquereli
ENSRNOG00000026116Sall310070.392ENSPVAG00000014645SALL39070.858Pteropus_vampyrus
ENSRNOG00000026116Sall38062.500ENSPNYG00000005353sall3b9163.462Pundamilia_nyererei
ENSRNOG00000026116Sall38066.224ENSPNYG00000012783sall3a8861.097Pundamilia_nyererei
ENSRNOG00000026116Sall39763.462ENSPNAG00000017141sall3b7663.462Pygocentrus_nattereri
ENSRNOG00000026116Sall39589.299ENSRBIG00000036190SALL37689.366Rhinopithecus_bieti
ENSRNOG00000026116Sall38289.468ENSRROG00000034130SALL38789.264Rhinopithecus_roxellana
ENSRNOG00000026116Sall38178.112ENSSBOG00000023380SALL310087.823Saimiri_boliviensis_boliviensis
ENSRNOG00000026116Sall39887.085ENSSHAG00000015872SALL38787.085Sarcophilus_harrisii
ENSRNOG00000026116Sall39774.349ENSSFOG00015012223sall3a9576.062Scleropages_formosus
ENSRNOG00000026116Sall39958.756ENSSFOG00015009159SALL39060.524Scleropages_formosus
ENSRNOG00000026116Sall39760.560ENSSMAG00000007674sall3a8679.608Scophthalmus_maximus
ENSRNOG00000026116Sall37865.625ENSSMAG00000019762sall3b6950.568Scophthalmus_maximus
ENSRNOG00000026116Sall38064.844ENSSDUG00000010584sall3b9250.874Seriola_dumerili
ENSRNOG00000026116Sall39762.595ENSSDUG00000011099sall3a8579.608Seriola_dumerili
ENSRNOG00000026116Sall39762.850ENSSLDG00000012706sall3a8561.500Seriola_lalandi_dorsalis
ENSRNOG00000026116Sall39765.098ENSSLDG00000016800sall3b8765.873Seriola_lalandi_dorsalis
ENSRNOG00000026116Sall37865.098ENSSPAG00000003172sall3b9064.844Stegastes_partitus
ENSRNOG00000026116Sall37978.431ENSSPAG00000013114sall3a9178.431Stegastes_partitus
ENSRNOG00000026116Sall310080.417ENSSSCG00000004858SALL38880.240Sus_scrofa
ENSRNOG00000026116Sall39877.199ENSTGUG00000006541SALL38876.851Taeniopygia_guttata
ENSRNOG00000026116Sall35267.391ENSTRUG00000003369sall3b8367.391Takifugu_rubripes
ENSRNOG00000026116Sall37979.608ENSTRUG00000017423sall3a9479.608Takifugu_rubripes
ENSRNOG00000026116Sall38161.538ENSTNIG00000001257sall3a7965.306Tetraodon_nigroviridis
ENSRNOG00000026116Sall38877.058ENSTBEG00000008964SALL37278.899Tupaia_belangeri
ENSRNOG00000026116Sall39077.281ENSTTRG00000004958SALL39777.561Tursiops_truncatus
ENSRNOG00000026116Sall39981.537ENSUAMG00000016908SALL39091.051Ursus_americanus
ENSRNOG00000026116Sall38080.442ENSVVUG00000018838SALL39679.684Vulpes_vulpes
ENSRNOG00000026116Sall39866.073ENSXETG00000000845sall38666.382Xenopus_tropicalis
ENSRNOG00000026116Sall39761.116ENSXCOG00000016907sall3a8661.426Xiphophorus_couchianus
ENSRNOG00000026116Sall36661.538ENSXCOG00000018799sall3b7761.538Xiphophorus_couchianus
ENSRNOG00000026116Sall38363.830ENSXMAG00000000798sall3b7963.830Xiphophorus_maculatus
ENSRNOG00000026116Sall39676.562ENSXMAG00000023447sall3a8676.562Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003674molecular_function-NDFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0005575cellular_component-NDComponent
GO:0005634nucleus21873635.IBAComponent
GO:0006355regulation of transcription, DNA-templated21873635.IBAProcess
GO:0008150biological_process-NDProcess
GO:0021891olfactory bulb interneuron development-IEAProcess
GO:0021891olfactory bulb interneuron development-ISOProcess
GO:0035136forelimb morphogenesis-IEAProcess
GO:0035136forelimb morphogenesis-ISOProcess
GO:0035137hindlimb morphogenesis-IEAProcess
GO:0035137hindlimb morphogenesis-ISOProcess
GO:0045879negative regulation of smoothened signaling pathway-IEAProcess
GO:0045879negative regulation of smoothened signaling pathway-ISOProcess

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