EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000026211 (Gene tree)
Gene ID: 288912
Gene Symbol: Mri1
Alias: LOC288912|M1Pi|MGC105780|RGD1307789
Full Name: methylthioribose-1-phosphate isomerase 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 6643 bases
Position: chr19:25360164-25366806
Accession: 1307789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000003762	IF-2B	PF01008.17	6.3e-80	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000003762	-	1870	-	ENSRNOP00000003762	369 (aa)	-	Q5HZE4

Gene Model

Click here to download ENSRNOG00000026211's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno00270	Cysteine and methionine metabolism	KEGG
rno01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000026211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000026211	Mri1	100	86.450	ENSG00000037757	MRI1	100	86.450	Homo_sapiens
ENSRNOG00000026211	Mri1	96	68.644	ENSAPOG00000009673	mri1	98	68.644	Acanthochromis_polyacanthus
ENSRNOG00000026211	Mri1	97	82.222	ENSAMEG00000012918	MRI1	99	82.778	Ailuropoda_melanoleuca
ENSRNOG00000026211	Mri1	96	68.644	ENSACIG00000009199	mri1	98	68.644	Amphilophus_citrinellus
ENSRNOG00000026211	Mri1	96	68.644	ENSAOCG00000009931	mri1	98	68.644	Amphiprion_ocellaris
ENSRNOG00000026211	Mri1	96	68.644	ENSAPEG00000013553	mri1	98	68.644	Amphiprion_percula
ENSRNOG00000026211	Mri1	96	68.644	ENSATEG00000019410	mri1	98	68.644	Anabas_testudineus
ENSRNOG00000026211	Mri1	96	71.268	ENSACAG00000003475	MRI1	98	70.986	Anolis_carolinensis
ENSRNOG00000026211	Mri1	100	85.366	ENSANAG00000020896	-	100	85.366	Aotus_nancymaae
ENSRNOG00000026211	Mri1	98	76.860	ENSANAG00000035382	-	100	76.860	Aotus_nancymaae
ENSRNOG00000026211	Mri1	96	68.644	ENSACLG00000020412	mri1	98	68.644	Astatotilapia_calliptera
ENSRNOG00000026211	Mri1	96	68.079	ENSAMXG00000011982	mri1	98	68.079	Astyanax_mexicanus
ENSRNOG00000026211	Mri1	97	86.835	ENSBTAG00000002524	MRI1	90	86.835	Bos_taurus
ENSRNOG00000026211	Mri1	94	43.678	WBGene00007236	C01G10.9	92	43.391	Caenorhabditis_elegans
ENSRNOG00000026211	Mri1	96	85.269	ENSCJAG00000044187	MRI1	94	85.269	Callithrix_jacchus
ENSRNOG00000026211	Mri1	99	85.054	ENSCAFG00000016615	MRI1	99	86.517	Canis_familiaris
ENSRNOG00000026211	Mri1	96	86.517	ENSCAFG00020006659	MRI1	99	86.517	Canis_lupus_dingo
ENSRNOG00000026211	Mri1	99	85.054	ENSCHIG00000019343	MRI1	99	85.054	Capra_hircus
ENSRNOG00000026211	Mri1	66	77.551	ENSTSYG00000034486	MRI1	100	77.551	Carlito_syrichta
ENSRNOG00000026211	Mri1	64	85.232	ENSCAPG00000015487	MRI1	99	85.232	Cavia_aperea
ENSRNOG00000026211	Mri1	98	81.717	ENSCPOG00000013191	MRI1	99	81.717	Cavia_porcellus
ENSRNOG00000026211	Mri1	98	76.584	ENSCCAG00000035484	-	100	76.584	Cebus_capucinus
ENSRNOG00000026211	Mri1	99	84.511	ENSCCAG00000014292	-	98	84.511	Cebus_capucinus
ENSRNOG00000026211	Mri1	100	70.461	ENSCATG00000029747	MRI1	100	70.241	Cercocebus_atys
ENSRNOG00000026211	Mri1	97	83.287	ENSCLAG00000013025	MRI1	99	83.287	Chinchilla_lanigera
ENSRNOG00000026211	Mri1	100	85.333	ENSCSAG00000006463	MRI1	100	85.333	Chlorocebus_sabaeus
ENSRNOG00000026211	Mri1	54	52.764	ENSCING00000000162	-	99	52.261	Ciona_intestinalis
ENSRNOG00000026211	Mri1	95	55.874	ENSCSAVG00000003107	-	98	55.301	Ciona_savignyi
ENSRNOG00000026211	Mri1	88	88.650	ENSCANG00000043216	MRI1	91	88.650	Colobus_angolensis_palliatus
ENSRNOG00000026211	Mri1	100	92.412	ENSCGRG00001015655	MRI1	100	92.412	Cricetulus_griseus_chok1gshd
ENSRNOG00000026211	Mri1	100	92.412	ENSCGRG00000005697	MRI1	100	92.412	Cricetulus_griseus_crigri
ENSRNOG00000026211	Mri1	96	68.644	ENSCSEG00000011410	mri1	99	68.451	Cynoglossus_semilaevis
ENSRNOG00000026211	Mri1	96	68.644	ENSCVAG00000023215	mri1	98	68.644	Cyprinodon_variegatus
ENSRNOG00000026211	Mri1	96	68.362	ENSDARG00000075754	mri1	96	77.193	Danio_rerio
ENSRNOG00000026211	Mri1	97	82.073	ENSDNOG00000047045	MRI1	99	82.073	Dasypus_novemcinctus
ENSRNOG00000026211	Mri1	98	82.825	ENSDORG00000010875	Mri1	99	82.825	Dipodomys_ordii
ENSRNOG00000026211	Mri1	97	55.738	FBgn0039849	CG11334	100	55.464	Drosophila_melanogaster
ENSRNOG00000026211	Mri1	85	84.444	ENSETEG00000017174	MRI1	99	84.444	Echinops_telfairi
ENSRNOG00000026211	Mri1	96	59.773	ENSEBUG00000014184	mri1	99	59.773	Eptatretus_burgeri
ENSRNOG00000026211	Mri1	96	83.708	ENSEASG00005000151	MRI1	99	83.708	Equus_asinus_asinus
ENSRNOG00000026211	Mri1	96	84.270	ENSECAG00000010706	MRI1	99	84.270	Equus_caballus
ENSRNOG00000026211	Mri1	96	61.017	ENSELUG00000016174	mri1	99	61.345	Esox_lucius
ENSRNOG00000026211	Mri1	93	78.613	ENSFCAG00000011508	MRI1	97	79.769	Felis_catus
ENSRNOG00000026211	Mri1	64	84.454	ENSFDAG00000017424	MRI1	92	84.454	Fukomys_damarensis
ENSRNOG00000026211	Mri1	96	68.927	ENSFHEG00000009358	MRI1	98	68.927	Fundulus_heteroclitus
ENSRNOG00000026211	Mri1	91	61.424	ENSGMOG00000002273	mri1	97	61.424	Gadus_morhua
ENSRNOG00000026211	Mri1	90	58.209	ENSGALG00000034575	MRI1	97	57.440	Gallus_gallus
ENSRNOG00000026211	Mri1	96	68.362	ENSGAFG00000010575	mri1	99	68.169	Gambusia_affinis
ENSRNOG00000026211	Mri1	91	68.843	ENSGACG00000018995	mri1	99	68.843	Gasterosteus_aculeatus
ENSRNOG00000026211	Mri1	98	72.853	ENSGAGG00000010411	MRI1	100	72.022	Gopherus_agassizii
ENSRNOG00000026211	Mri1	100	86.179	ENSGGOG00000006628	MRI1	100	86.179	Gorilla_gorilla
ENSRNOG00000026211	Mri1	96	68.644	ENSHBUG00000018620	mri1	98	68.644	Haplochromis_burtoni
ENSRNOG00000026211	Mri1	96	84.270	ENSHGLG00000010969	MRI1	98	84.270	Heterocephalus_glaber_female
ENSRNOG00000026211	Mri1	96	79.272	ENSHGLG00100007151	MRI1	99	79.272	Heterocephalus_glaber_male
ENSRNOG00000026211	Mri1	96	68.079	ENSHCOG00000014695	mri1	98	68.079	Hippocampus_comes
ENSRNOG00000026211	Mri1	96	68.927	ENSIPUG00000008756	mri1	99	68.732	Ictalurus_punctatus
ENSRNOG00000026211	Mri1	96	85.028	ENSSTOG00000020750	MRI1	98	85.028	Ictidomys_tridecemlineatus
ENSRNOG00000026211	Mri1	99	84.932	ENSJJAG00000018104	Mri1	99	84.932	Jaculus_jaculus
ENSRNOG00000026211	Mri1	96	68.644	ENSKMAG00000018700	mri1	98	68.644	Kryptolebias_marmoratus
ENSRNOG00000026211	Mri1	96	68.079	ENSLBEG00000004998	mri1	98	68.079	Labrus_bergylta
ENSRNOG00000026211	Mri1	96	68.644	ENSLACG00000006845	MRI1	99	68.644	Latimeria_chalumnae
ENSRNOG00000026211	Mri1	97	75.910	ENSLAFG00000012910	MRI1	100	75.910	Loxodonta_africana
ENSRNOG00000026211	Mri1	85	87.619	ENSMFAG00000044250	MRI1	99	87.619	Macaca_fascicularis
ENSRNOG00000026211	Mri1	100	86.721	ENSMMUG00000018068	MRI1	100	86.721	Macaca_mulatta
ENSRNOG00000026211	Mri1	100	86.721	ENSMNEG00000002628	MRI1	92	86.721	Macaca_nemestrina
ENSRNOG00000026211	Mri1	100	86.992	ENSMLEG00000035138	MRI1	100	86.992	Mandrillus_leucophaeus
ENSRNOG00000026211	Mri1	96	68.079	ENSMAMG00000011686	mri1	99	67.887	Mastacembelus_armatus
ENSRNOG00000026211	Mri1	96	68.644	ENSMZEG00005007657	mri1	98	68.644	Maylandia_zebra
ENSRNOG00000026211	Mri1	72	91.935	ENSMAUG00000003451	Mri1	100	91.935	Mesocricetus_auratus
ENSRNOG00000026211	Mri1	100	84.282	ENSMICG00000031875	MRI1	100	84.282	Microcebus_murinus
ENSRNOG00000026211	Mri1	100	93.496	ENSMOCG00000009591	Mri1	100	93.496	Microtus_ochrogaster
ENSRNOG00000026211	Mri1	96	68.644	ENSMMOG00000021373	mri1	68	68.644	Mola_mola
ENSRNOG00000026211	Mri1	96	77.183	ENSMODG00000011870	MRI1	100	77.183	Monodelphis_domestica
ENSRNOG00000026211	Mri1	96	67.514	ENSMALG00000006021	mri1	98	67.514	Monopterus_albus
ENSRNOG00000026211	Mri1	100	94.580	MGP_CAROLIEiJ_G0031299	Mri1	100	94.580	Mus_caroli
ENSRNOG00000026211	Mri1	100	94.580	ENSMUSG00000004996	Mri1	100	94.580	Mus_musculus
ENSRNOG00000026211	Mri1	100	95.122	MGP_PahariEiJ_G0022905	Mri1	100	95.541	Mus_pahari
ENSRNOG00000026211	Mri1	100	94.580	MGP_SPRETEiJ_G0032417	Mri1	100	94.580	Mus_spretus
ENSRNOG00000026211	Mri1	97	86.555	ENSMPUG00000003316	MRI1	99	86.555	Mustela_putorius_furo
ENSRNOG00000026211	Mri1	96	86.197	ENSMLUG00000004766	MRI1	99	86.197	Myotis_lucifugus
ENSRNOG00000026211	Mri1	98	88.154	ENSNGAG00000022102	Mri1	100	88.154	Nannospalax_galili
ENSRNOG00000026211	Mri1	96	60.169	ENSNBRG00000023766	mri1	98	60.169	Neolamprologus_brichardi
ENSRNOG00000026211	Mri1	100	85.908	ENSNLEG00000013138	MRI1	100	85.908	Nomascus_leucogenys
ENSRNOG00000026211	Mri1	96	64.306	ENSMEUG00000013717	MRI1	97	64.306	Notamacropus_eugenii
ENSRNOG00000026211	Mri1	58	86.512	ENSOPRG00000015475	-	100	86.512	Ochotona_princeps
ENSRNOG00000026211	Mri1	50	85.870	ENSOPRG00000008859	-	99	85.870	Ochotona_princeps
ENSRNOG00000026211	Mri1	94	83.237	ENSODEG00000010083	-	94	83.237	Octodon_degus
ENSRNOG00000026211	Mri1	99	80.822	ENSODEG00000019755	-	99	80.822	Octodon_degus
ENSRNOG00000026211	Mri1	96	68.644	ENSONIG00000017732	mri1	98	68.644	Oreochromis_niloticus
ENSRNOG00000026211	Mri1	85	78.662	ENSOANG00000012399	MRI1	97	78.662	Ornithorhynchus_anatinus
ENSRNOG00000026211	Mri1	96	83.146	ENSOCUG00000024840	MRI1	98	83.146	Oryctolagus_cuniculus
ENSRNOG00000026211	Mri1	96	68.079	ENSORLG00000011911	mri1	98	68.079	Oryzias_latipes
ENSRNOG00000026211	Mri1	96	68.079	ENSORLG00020005135	MRI1	98	68.079	Oryzias_latipes_hni
ENSRNOG00000026211	Mri1	96	68.079	ENSORLG00015003701	MRI1	98	68.079	Oryzias_latipes_hsok
ENSRNOG00000026211	Mri1	91	63.988	ENSOMEG00000013120	mri1	99	63.988	Oryzias_melastigma
ENSRNOG00000026211	Mri1	100	83.288	ENSOGAG00000007183	MRI1	100	83.288	Otolemur_garnettii
ENSRNOG00000026211	Mri1	99	71.698	ENSOARG00000008222	MRI1	99	71.698	Ovis_aries
ENSRNOG00000026211	Mri1	100	75.610	ENSPPAG00000033346	MRI1	100	74.255	Pan_paniscus
ENSRNOG00000026211	Mri1	99	84.239	ENSPPRG00000006539	MRI1	99	84.239	Panthera_pardus
ENSRNOG00000026211	Mri1	97	85.434	ENSPTIG00000005216	MRI1	99	85.434	Panthera_tigris_altaica
ENSRNOG00000026211	Mri1	100	85.637	ENSPTRG00000010563	MRI1	100	85.637	Pan_troglodytes
ENSRNOG00000026211	Mri1	100	86.992	ENSPANG00000010977	MRI1	100	86.992	Papio_anubis
ENSRNOG00000026211	Mri1	96	61.017	ENSPKIG00000003387	mri1	98	61.017	Paramormyrops_kingsleyae
ENSRNOG00000026211	Mri1	96	68.927	ENSPMGG00000016429	mri1	98	68.927	Periophthalmus_magnuspinnatus
ENSRNOG00000026211	Mri1	100	93.225	ENSPEMG00000006105	Mri1	100	93.225	Peromyscus_maniculatus_bairdii
ENSRNOG00000026211	Mri1	96	61.972	ENSPMAG00000006128	mri1	99	61.972	Petromyzon_marinus
ENSRNOG00000026211	Mri1	96	76.966	ENSPCIG00000019032	MRI1	99	76.966	Phascolarctos_cinereus
ENSRNOG00000026211	Mri1	96	68.927	ENSPFOG00000004311	mri1	99	68.732	Poecilia_formosa
ENSRNOG00000026211	Mri1	96	68.644	ENSPLAG00000010852	mri1	98	68.644	Poecilia_latipinna
ENSRNOG00000026211	Mri1	96	68.927	ENSPMEG00000014113	mri1	99	68.732	Poecilia_mexicana
ENSRNOG00000026211	Mri1	77	64.561	ENSPREG00000000422	mri1	81	64.561	Poecilia_reticulata
ENSRNOG00000026211	Mri1	100	80.429	ENSPPYG00000010570	MRI1	100	80.429	Pongo_abelii
ENSRNOG00000026211	Mri1	98	84.488	ENSPCAG00000014275	MRI1	99	84.488	Procavia_capensis
ENSRNOG00000026211	Mri1	88	87.385	ENSPCOG00000021500	MRI1	100	87.385	Propithecus_coquereli
ENSRNOG00000026211	Mri1	99	85.165	ENSPVAG00000006322	MRI1	99	85.165	Pteropus_vampyrus
ENSRNOG00000026211	Mri1	96	68.644	ENSPNYG00000001542	mri1	98	68.644	Pundamilia_nyererei
ENSRNOG00000026211	Mri1	96	67.232	ENSPNAG00000012506	mri1	99	67.042	Pygocentrus_nattereri
ENSRNOG00000026211	Mri1	100	86.992	ENSRBIG00000028556	MRI1	83	86.992	Rhinopithecus_bieti
ENSRNOG00000026211	Mri1	100	86.450	ENSRROG00000031188	MRI1	100	86.450	Rhinopithecus_roxellana
ENSRNOG00000026211	Mri1	93	40.943	YPR118W	-	97	40.199	Saccharomyces_cerevisiae
ENSRNOG00000026211	Mri1	88	86.462	ENSSBOG00000034840	-	100	86.462	Saimiri_boliviensis_boliviensis
ENSRNOG00000026211	Mri1	98	72.452	ENSSBOG00000029825	-	100	72.452	Saimiri_boliviensis_boliviensis
ENSRNOG00000026211	Mri1	96	77.183	ENSSHAG00000011531	MRI1	99	77.183	Sarcophilus_harrisii
ENSRNOG00000026211	Mri1	84	68.489	ENSSFOG00015018651	mri1	95	68.489	Scleropages_formosus
ENSRNOG00000026211	Mri1	96	68.079	ENSSMAG00000004636	mri1	98	68.079	Scophthalmus_maximus
ENSRNOG00000026211	Mri1	96	68.644	ENSSDUG00000002275	mri1	98	68.644	Seriola_dumerili
ENSRNOG00000026211	Mri1	96	68.644	ENSSLDG00000012900	mri1	98	68.644	Seriola_lalandi_dorsalis
ENSRNOG00000026211	Mri1	96	83.944	ENSSARG00000007904	MRI1	98	83.944	Sorex_araneus
ENSRNOG00000026211	Mri1	99	55.041	ENSSPUG00000002937	MRI1	99	54.768	Sphenodon_punctatus
ENSRNOG00000026211	Mri1	96	68.644	ENSSPAG00000008235	mri1	98	68.644	Stegastes_partitus
ENSRNOG00000026211	Mri1	97	86.555	ENSSSCG00000013756	MRI1	90	86.555	Sus_scrofa
ENSRNOG00000026211	Mri1	96	68.644	ENSTRUG00000010929	mri1	98	68.644	Takifugu_rubripes
ENSRNOG00000026211	Mri1	96	66.949	ENSTNIG00000014065	mri1	99	66.949	Tetraodon_nigroviridis
ENSRNOG00000026211	Mri1	85	63.492	ENSTBEG00000008620	MRI1	99	62.857	Tupaia_belangeri
ENSRNOG00000026211	Mri1	99	83.696	ENSTTRG00000010347	MRI1	99	83.696	Tursiops_truncatus
ENSRNOG00000026211	Mri1	97	86.555	ENSUAMG00000015405	MRI1	99	86.555	Ursus_americanus
ENSRNOG00000026211	Mri1	97	84.314	ENSUMAG00000004743	MRI1	99	84.746	Ursus_maritimus
ENSRNOG00000026211	Mri1	63	84.066	ENSVPAG00000011144	-	63	84.066	Vicugna_pacos
ENSRNOG00000026211	Mri1	96	86.236	ENSVVUG00000026734	MRI1	90	86.236	Vulpes_vulpes
ENSRNOG00000026211	Mri1	96	67.409	ENSXETG00000021867	mri1	99	67.409	Xenopus_tropicalis
ENSRNOG00000026211	Mri1	94	64.841	ENSXCOG00000014431	mri1	96	64.655	Xiphophorus_couchianus
ENSRNOG00000026211	Mri1	96	69.209	ENSXMAG00000027505	MRI1	99	69.014	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001650	fibrillar center	-	IEA	Component
GO:0001650	fibrillar center	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0019284	L-methionine salvage from S-adenosylmethionine	-	IEA	Process
GO:0019509	L-methionine salvage from methylthioadenosine	21873635.	IBA	Process
GO:0019509	L-methionine salvage from methylthioadenosine	-	IEA	Process
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0046523	S-methyl-5-thioribose-1-phosphate isomerase activity	21873635.	IBA	Function