EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000026239 (Gene tree)
Gene ID: 314205
Gene Symbol: Arid4a
Alias: LOC314205
Full Name: AT-rich interaction domain 4A
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 71189 bases
Position: chr6:93461713-93532901
Accession: 1307442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000029718	Tudor-knot	PF11717.8	2.7e-13	1	1
ENSRNOP00000071353	Tudor-knot	PF11717.8	2.7e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000089473	-	4025	-	ENSRNOP00000071353	1258 (aa)	-	A0A0G2K094
ENSRNOT00000031595	-	4886	-	ENSRNOP00000029718	959 (aa)	-	D4ADE4

Gene Model

Click here to download ENSRNOG00000026239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000026239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000026239	Arid4a	100	84.365	ENSG00000032219	ARID4A	100	100.000	Homo_sapiens
ENSRNOG00000026239	Arid4a	99	83.099	ENSAMEG00000002532	ARID4A	99	82.864	Ailuropoda_melanoleuca
ENSRNOG00000026239	Arid4a	75	50.718	ENSACIG00000021943	-	63	54.339	Amphilophus_citrinellus
ENSRNOG00000026239	Arid4a	82	56.612	ENSATEG00000014386	arid4a	55	65.298	Anabas_testudineus
ENSRNOG00000026239	Arid4a	99	70.938	ENSAPLG00000006185	ARID4A	100	71.507	Anas_platyrhynchos
ENSRNOG00000026239	Arid4a	100	65.594	ENSACAG00000014637	ARID4A	99	65.544	Anolis_carolinensis
ENSRNOG00000026239	Arid4a	100	83.810	ENSANAG00000037559	ARID4A	100	83.571	Aotus_nancymaae
ENSRNOG00000026239	Arid4a	59	61.631	ENSACLG00000005837	arid4a	81	56.701	Astatotilapia_calliptera
ENSRNOG00000026239	Arid4a	69	41.744	ENSAMXG00000000379	arid4a	90	66.053	Astyanax_mexicanus
ENSRNOG00000026239	Arid4a	100	84.798	ENSBTAG00000018898	ARID4A	100	84.481	Bos_taurus
ENSRNOG00000026239	Arid4a	100	83.889	ENSCJAG00000018764	ARID4A	100	83.651	Callithrix_jacchus
ENSRNOG00000026239	Arid4a	100	85.079	ENSCAFG00000023936	ARID4A	100	84.762	Canis_familiaris
ENSRNOG00000026239	Arid4a	100	84.921	ENSCAFG00020008690	ARID4A	99	84.603	Canis_lupus_dingo
ENSRNOG00000026239	Arid4a	99	82.581	ENSCHIG00000021589	ARID4A	100	82.344	Capra_hircus
ENSRNOG00000026239	Arid4a	99	83.625	ENSTSYG00000013397	ARID4A	99	83.545	Carlito_syrichta
ENSRNOG00000026239	Arid4a	52	66.263	ENSCPOG00000032725	-	98	72.032	Cavia_porcellus
ENSRNOG00000026239	Arid4a	96	81.023	ENSCCAG00000019639	ARID4A	98	80.776	Cebus_capucinus
ENSRNOG00000026239	Arid4a	100	84.286	ENSCATG00000041635	ARID4A	100	83.968	Cercocebus_atys
ENSRNOG00000026239	Arid4a	53	69.863	ENSCLAG00000003914	-	99	73.396	Chinchilla_lanigera
ENSRNOG00000026239	Arid4a	78	82.371	ENSCSAG00000014425	ARID4A	98	82.168	Chlorocebus_sabaeus
ENSRNOG00000026239	Arid4a	87	91.667	ENSCHOG00000003408	ARID4A	94	76.075	Choloepus_hoffmanni
ENSRNOG00000026239	Arid4a	100	72.447	ENSCPBG00000024815	ARID4A	100	73.238	Chrysemys_picta_bellii
ENSRNOG00000026239	Arid4a	97	100.000	ENSCANG00000034778	ARID4A	100	83.810	Colobus_angolensis_palliatus
ENSRNOG00000026239	Arid4a	100	88.086	ENSCGRG00001018168	Arid4a	100	87.689	Cricetulus_griseus_chok1gshd
ENSRNOG00000026239	Arid4a	96	87.531	ENSCGRG00000005293	Arid4a	96	87.118	Cricetulus_griseus_crigri
ENSRNOG00000026239	Arid4a	81	56.138	ENSCSEG00000011930	arid4a	56	63.673	Cynoglossus_semilaevis
ENSRNOG00000026239	Arid4a	100	82.685	ENSDNOG00000004090	ARID4A	100	82.367	Dasypus_novemcinctus
ENSRNOG00000026239	Arid4a	100	78.033	ENSDORG00000002170	Arid4a	100	77.637	Dipodomys_ordii
ENSRNOG00000026239	Arid4a	92	81.402	ENSETEG00000014494	ARID4A	92	79.784	Echinops_telfairi
ENSRNOG00000026239	Arid4a	100	84.603	ENSEASG00005016222	ARID4A	99	84.365	Equus_asinus_asinus
ENSRNOG00000026239	Arid4a	100	84.603	ENSECAG00000019256	ARID4A	100	84.365	Equus_caballus
ENSRNOG00000026239	Arid4a	100	74.623	ENSEEUG00000001510	ARID4A	100	74.623	Erinaceus_europaeus
ENSRNOG00000026239	Arid4a	71	65.638	ENSELUG00000003087	arid4a	69	66.105	Esox_lucius
ENSRNOG00000026239	Arid4a	95	98.795	ENSFCAG00000019223	ARID4A	100	98.795	Felis_catus
ENSRNOG00000026239	Arid4a	100	70.960	ENSFALG00000003561	ARID4A	100	71.116	Ficedula_albicollis
ENSRNOG00000026239	Arid4a	84	89.840	ENSFDAG00000005958	-	100	89.840	Fukomys_damarensis
ENSRNOG00000026239	Arid4a	65	68.720	ENSFHEG00000004741	arid4a	64	63.017	Fundulus_heteroclitus
ENSRNOG00000026239	Arid4a	100	72.209	ENSGALG00000012037	ARID4A	100	73.001	Gallus_gallus
ENSRNOG00000026239	Arid4a	100	71.971	ENSGAGG00000012085	ARID4A	100	72.763	Gopherus_agassizii
ENSRNOG00000026239	Arid4a	100	84.286	ENSGGOG00000027092	ARID4A	100	98.795	Gorilla_gorilla
ENSRNOG00000026239	Arid4a	53	73.529	ENSHGLG00000001903	-	99	76.792	Heterocephalus_glaber_female
ENSRNOG00000026239	Arid4a	53	72.549	ENSHGLG00100005885	-	99	75.849	Heterocephalus_glaber_male
ENSRNOG00000026239	Arid4a	98	42.151	ENSIPUG00000001971	arid4a	50	43.906	Ictalurus_punctatus
ENSRNOG00000026239	Arid4a	100	85.556	ENSSTOG00000019680	ARID4A	100	85.397	Ictidomys_tridecemlineatus
ENSRNOG00000026239	Arid4a	99	78.070	ENSJJAG00000016742	Arid4a	100	77.352	Jaculus_jaculus
ENSRNOG00000026239	Arid4a	80	54.583	ENSKMAG00000018271	arid4a	57	63.360	Kryptolebias_marmoratus
ENSRNOG00000026239	Arid4a	62	56.806	ENSLBEG00000018330	arid4a	51	84.483	Labrus_bergylta
ENSRNOG00000026239	Arid4a	70	57.333	ENSLACG00000018876	ARID4A	56	56.344	Latimeria_chalumnae
ENSRNOG00000026239	Arid4a	68	48.918	ENSLOCG00000009355	arid4a	50	50.723	Lepisosteus_oculatus
ENSRNOG00000026239	Arid4a	100	84.114	ENSLAFG00000008653	ARID4A	99	83.797	Loxodonta_africana
ENSRNOG00000026239	Arid4a	100	84.286	ENSMFAG00000037044	ARID4A	100	83.968	Macaca_fascicularis
ENSRNOG00000026239	Arid4a	100	84.365	ENSMMUG00000003514	ARID4A	100	84.048	Macaca_mulatta
ENSRNOG00000026239	Arid4a	100	84.365	ENSMNEG00000037476	ARID4A	100	84.048	Macaca_nemestrina
ENSRNOG00000026239	Arid4a	100	84.206	ENSMLEG00000043095	ARID4A	100	83.889	Mandrillus_leucophaeus
ENSRNOG00000026239	Arid4a	55	53.254	ENSMAMG00000006769	arid4a	59	53.968	Mastacembelus_armatus
ENSRNOG00000026239	Arid4a	59	61.631	ENSMZEG00005017186	arid4a	81	56.701	Maylandia_zebra
ENSRNOG00000026239	Arid4a	100	71.473	ENSMGAG00000013615	ARID4A	100	72.274	Meleagris_gallopavo
ENSRNOG00000026239	Arid4a	88	81.785	ENSMAUG00000016160	Arid4a	97	79.476	Mesocricetus_auratus
ENSRNOG00000026239	Arid4a	100	84.988	ENSMICG00000011761	ARID4A	100	84.750	Microcebus_murinus
ENSRNOG00000026239	Arid4a	100	87.133	ENSMOCG00000010098	Arid4a	100	86.736	Microtus_ochrogaster
ENSRNOG00000026239	Arid4a	100	75.254	ENSMODG00000007881	ARID4A	100	75.254	Monodelphis_domestica
ENSRNOG00000026239	Arid4a	59	68.246	ENSMALG00000019138	arid4a	95	62.933	Monopterus_albus
ENSRNOG00000026239	Arid4a	100	91.508	MGP_CAROLIEiJ_G0017824	Arid4a	100	91.190	Mus_caroli
ENSRNOG00000026239	Arid4a	100	91.594	ENSMUSG00000048118	Arid4a	100	91.277	Mus_musculus
ENSRNOG00000026239	Arid4a	100	91.812	MGP_PahariEiJ_G0029580	Arid4a	100	91.812	Mus_pahari
ENSRNOG00000026239	Arid4a	100	91.673	MGP_SPRETEiJ_G0018669	Arid4a	100	91.356	Mus_spretus
ENSRNOG00000026239	Arid4a	100	84.524	ENSMPUG00000006137	ARID4A	100	84.286	Mustela_putorius_furo
ENSRNOG00000026239	Arid4a	99	83.112	ENSMLUG00000012354	ARID4A	99	82.955	Myotis_lucifugus
ENSRNOG00000026239	Arid4a	100	81.854	ENSNGAG00000015701	Arid4a	99	81.408	Nannospalax_galili
ENSRNOG00000026239	Arid4a	97	100.000	ENSNLEG00000013149	ARID4A	100	98.795	Nomascus_leucogenys
ENSRNOG00000026239	Arid4a	68	87.879	ENSOPRG00000002859	ARID4A	71	87.879	Ochotona_princeps
ENSRNOG00000026239	Arid4a	55	67.416	ENSODEG00000014309	-	99	73.774	Octodon_degus
ENSRNOG00000026239	Arid4a	100	46.373	ENSONIG00000011016	arid4a	51	38.137	Oreochromis_niloticus
ENSRNOG00000026239	Arid4a	77	70.010	ENSOANG00000011836	ARID4A	100	70.010	Ornithorhynchus_anatinus
ENSRNOG00000026239	Arid4a	100	81.746	ENSOCUG00000001052	ARID4A	100	81.508	Oryctolagus_cuniculus
ENSRNOG00000026239	Arid4a	66	66.827	ENSORLG00020001443	arid4a	71	84.483	Oryzias_latipes_hni
ENSRNOG00000026239	Arid4a	100	82.581	ENSOGAG00000000385	ARID4A	100	82.423	Otolemur_garnettii
ENSRNOG00000026239	Arid4a	100	83.782	ENSOARG00000021110	ARID4A	100	83.544	Ovis_aries
ENSRNOG00000026239	Arid4a	100	84.365	ENSPPAG00000042713	ARID4A	100	98.795	Pan_paniscus
ENSRNOG00000026239	Arid4a	95	98.795	ENSPPRG00000009142	ARID4A	100	98.795	Panthera_pardus
ENSRNOG00000026239	Arid4a	95	98.795	ENSPTIG00000007597	ARID4A	100	98.795	Panthera_tigris_altaica
ENSRNOG00000026239	Arid4a	100	84.365	ENSPTRG00000006393	ARID4A	100	98.795	Pan_troglodytes
ENSRNOG00000026239	Arid4a	100	84.286	ENSPANG00000022390	ARID4A	100	83.968	Papio_anubis
ENSRNOG00000026239	Arid4a	99	71.118	ENSPSIG00000014845	ARID4A	100	71.140	Pelodiscus_sinensis
ENSRNOG00000026239	Arid4a	100	87.927	ENSPEMG00000008231	Arid4a	100	87.847	Peromyscus_maniculatus_bairdii
ENSRNOG00000026239	Arid4a	95	73.585	ENSPCIG00000017482	ARID4A	98	72.929	Phascolarctos_cinereus
ENSRNOG00000026239	Arid4a	59	66.592	ENSPFOG00000018637	arid4a	65	63.693	Poecilia_formosa
ENSRNOG00000026239	Arid4a	59	66.592	ENSPLAG00000003432	arid4a	65	63.693	Poecilia_latipinna
ENSRNOG00000026239	Arid4a	59	67.040	ENSPMEG00000010607	arid4a	65	64.108	Poecilia_mexicana
ENSRNOG00000026239	Arid4a	100	84.524	ENSPPYG00000005857	ARID4A	100	84.286	Pongo_abelii
ENSRNOG00000026239	Arid4a	88	92.513	ENSPCAG00000002099	ARID4A	88	92.513	Procavia_capensis
ENSRNOG00000026239	Arid4a	100	84.762	ENSPCOG00000013924	ARID4A	100	84.524	Propithecus_coquereli
ENSRNOG00000026239	Arid4a	100	83.651	ENSPVAG00000003866	ARID4A	100	83.492	Pteropus_vampyrus
ENSRNOG00000026239	Arid4a	59	61.631	ENSPNYG00000009221	arid4a	79	57.025	Pundamilia_nyererei
ENSRNOG00000026239	Arid4a	100	83.902	ENSRBIG00000032944	ARID4A	99	83.664	Rhinopithecus_bieti
ENSRNOG00000026239	Arid4a	100	84.444	ENSRROG00000034002	ARID4A	100	84.206	Rhinopithecus_roxellana
ENSRNOG00000026239	Arid4a	100	83.810	ENSSBOG00000027453	ARID4A	100	83.571	Saimiri_boliviensis_boliviensis
ENSRNOG00000026239	Arid4a	99	76.764	ENSSHAG00000018032	ARID4A	99	76.606	Sarcophilus_harrisii
ENSRNOG00000026239	Arid4a	98	43.697	ENSSFOG00015019230	arid4a	52	45.467	Scleropages_formosus
ENSRNOG00000026239	Arid4a	56	54.278	ENSSMAG00000012268	arid4a	55	62.500	Scophthalmus_maximus
ENSRNOG00000026239	Arid4a	60	57.075	ENSSDUG00000000343	arid4a	65	53.484	Seriola_dumerili
ENSRNOG00000026239	Arid4a	99	82.923	ENSSARG00000006966	ARID4A	100	82.844	Sorex_araneus
ENSRNOG00000026239	Arid4a	99	70.362	ENSSPUG00000018360	ARID4A	100	70.126	Sphenodon_punctatus
ENSRNOG00000026239	Arid4a	62	57.287	ENSSPAG00000004467	arid4a	89	63.505	Stegastes_partitus
ENSRNOG00000026239	Arid4a	100	82.514	ENSSSCG00000005073	ARID4A	100	82.279	Sus_scrofa
ENSRNOG00000026239	Arid4a	59	73.719	ENSTGUG00000013032	-	99	73.982	Taeniopygia_guttata
ENSRNOG00000026239	Arid4a	83	55.091	ENSTNIG00000002593	arid4a	64	63.278	Tetraodon_nigroviridis
ENSRNOG00000026239	Arid4a	80	79.960	ENSTBEG00000017302	ARID4A	82	79.860	Tupaia_belangeri
ENSRNOG00000026239	Arid4a	100	82.698	ENSUAMG00000007706	ARID4A	99	82.460	Ursus_americanus
ENSRNOG00000026239	Arid4a	100	83.425	ENSUMAG00000016791	ARID4A	99	83.190	Ursus_maritimus
ENSRNOG00000026239	Arid4a	93	84.870	ENSVPAG00000003645	ARID4A	93	84.438	Vicugna_pacos
ENSRNOG00000026239	Arid4a	100	84.841	ENSVVUG00000029542	ARID4A	100	84.524	Vulpes_vulpes
ENSRNOG00000026239	Arid4a	100	57.980	ENSXETG00000011968	arid4a	98	65.934	Xenopus_tropicalis
ENSRNOG00000026239	Arid4a	59	67.517	ENSXMAG00000004904	arid4a	64	62.994	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006349	regulation of gene expression by genetic imprinting	-	IEA	Process
GO:0006349	regulation of gene expression by genetic imprinting	-	ISO	Process
GO:0006357	regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0007283	spermatogenesis	-	IEA	Process
GO:0007283	spermatogenesis	-	ISO	Process
GO:0017053	transcriptional repressor complex	-	IEA	Component
GO:0017053	transcriptional repressor complex	-	ISO	Component
GO:0034773	histone H4-K20 trimethylation	-	IEA	Process
GO:0034773	histone H4-K20 trimethylation	-	ISO	Process
GO:0036124	histone H3-K9 trimethylation	-	IEA	Process
GO:0036124	histone H3-K9 trimethylation	-	ISO	Process
GO:0044212	transcription regulatory region DNA binding	21873635.	IBA	Function
GO:0045892	negative regulation of transcription, DNA-templated	-	IEA	Process
GO:0045892	negative regulation of transcription, DNA-templated	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0048821	erythrocyte development	-	IEA	Process
GO:0048821	erythrocyte development	-	ISO	Process
GO:0080182	histone H3-K4 trimethylation	-	IEA	Process
GO:0080182	histone H3-K4 trimethylation	-	ISO	Process
GO:0097368	establishment of Sertoli cell barrier	-	IEA	Process
GO:0097368	establishment of Sertoli cell barrier	-	ISO	Process