EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000026316 (Gene tree)
Gene ID: 362703
Gene Symbol: Wdr43
Alias: LOC362703|MGC116335
Full Name: WD repeat domain 43
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 39638 bases
Position: chr6:23433532-23473169
Accession: 1565005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000033485	Utp12	PF04003.12	4.9e-22	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000035320	-	3431	XM_006239770	ENSRNOP00000033485	674 (aa)	XP_006239832	G3V920

Gene Model

Click here to download ENSRNOG00000026316's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000026316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000026316	Wdr43	100	85.377	ENSG00000163811	WDR43	100	94.118	Homo_sapiens
ENSRNOG00000026316	Wdr43	89	55.155	ENSAPOG00000020303	wdr43	98	53.812	Acanthochromis_polyacanthus
ENSRNOG00000026316	Wdr43	99	85.672	ENSAMEG00000005150	WDR43	97	86.451	Ailuropoda_melanoleuca
ENSRNOG00000026316	Wdr43	92	52.480	ENSACIG00000010675	wdr43	100	51.026	Amphilophus_citrinellus
ENSRNOG00000026316	Wdr43	92	54.545	ENSAOCG00000006818	wdr43	97	53.499	Amphiprion_ocellaris
ENSRNOG00000026316	Wdr43	92	55.183	ENSAPEG00000000552	wdr43	100	53.869	Amphiprion_percula
ENSRNOG00000026316	Wdr43	92	54.818	ENSATEG00000010805	wdr43	100	52.830	Anabas_testudineus
ENSRNOG00000026316	Wdr43	87	68.297	ENSAPLG00000014314	WDR43	99	67.442	Anas_platyrhynchos
ENSRNOG00000026316	Wdr43	96	66.920	ENSACAG00000009264	WDR43	94	66.413	Anolis_carolinensis
ENSRNOG00000026316	Wdr43	100	86.726	ENSANAG00000035736	WDR43	100	87.021	Aotus_nancymaae
ENSRNOG00000026316	Wdr43	99	52.671	ENSACLG00000025675	wdr43	100	52.855	Astatotilapia_calliptera
ENSRNOG00000026316	Wdr43	100	53.546	ENSAMXG00000018623	wdr43	100	53.968	Astyanax_mexicanus
ENSRNOG00000026316	Wdr43	100	84.875	ENSBTAG00000018196	WDR43	100	86.197	Bos_taurus
ENSRNOG00000026316	Wdr43	100	85.398	ENSCJAG00000008946	WDR43	100	86.873	Callithrix_jacchus
ENSRNOG00000026316	Wdr43	100	84.581	ENSCAFG00000005253	WDR43	100	85.903	Canis_familiaris
ENSRNOG00000026316	Wdr43	90	88.506	ENSCAFG00020024035	WDR43	85	88.188	Canis_lupus_dingo
ENSRNOG00000026316	Wdr43	100	85.169	ENSCHIG00000006001	WDR43	100	86.490	Capra_hircus
ENSRNOG00000026316	Wdr43	89	79.339	ENSTSYG00000006448	WDR43	100	80.826	Carlito_syrichta
ENSRNOG00000026316	Wdr43	88	68.908	ENSCAPG00000014276	WDR43	100	69.128	Cavia_aperea
ENSRNOG00000026316	Wdr43	100	84.661	ENSCCAG00000028533	WDR43	100	86.136	Cebus_capucinus
ENSRNOG00000026316	Wdr43	100	85.841	ENSCATG00000031005	WDR43	100	87.463	Cercocebus_atys
ENSRNOG00000026316	Wdr43	100	85.947	ENSCLAG00000011898	WDR43	100	87.130	Chinchilla_lanigera
ENSRNOG00000026316	Wdr43	73	84.507	ENSCSAG00000010665	WDR43	100	86.720	Chlorocebus_sabaeus
ENSRNOG00000026316	Wdr43	99	83.234	ENSCHOG00000013830	WDR43	97	84.047	Choloepus_hoffmanni
ENSRNOG00000026316	Wdr43	99	68.041	ENSCPBG00000000374	WDR43	99	67.747	Chrysemys_picta_bellii
ENSRNOG00000026316	Wdr43	100	83.136	ENSCANG00000033059	WDR43	100	83.923	Colobus_angolensis_palliatus
ENSRNOG00000026316	Wdr43	100	89.249	ENSCGRG00001023204	Wdr43	100	91.900	Cricetulus_griseus_chok1gshd
ENSRNOG00000026316	Wdr43	89	88.099	ENSCGRG00000005070	Wdr43	99	91.074	Cricetulus_griseus_crigri
ENSRNOG00000026316	Wdr43	93	52.756	ENSCSEG00000016372	wdr43	100	51.023	Cynoglossus_semilaevis
ENSRNOG00000026316	Wdr43	65	56.696	ENSCVAG00000016604	wdr43	90	56.696	Cyprinodon_variegatus
ENSRNOG00000026316	Wdr43	100	54.839	ENSDARG00000077264	wdr43	100	54.506	Danio_rerio
ENSRNOG00000026316	Wdr43	100	83.900	ENSDNOG00000018841	WDR43	100	86.115	Dasypus_novemcinctus
ENSRNOG00000026316	Wdr43	100	80.560	ENSDORG00000000255	Wdr43	100	81.591	Dipodomys_ordii
ENSRNOG00000026316	Wdr43	73	96.503	ENSETEG00000004853	WDR43	71	96.503	Echinops_telfairi
ENSRNOG00000026316	Wdr43	87	46.293	ENSEBUG00000016586	wdr43	90	44.898	Eptatretus_burgeri
ENSRNOG00000026316	Wdr43	100	85.044	ENSEASG00005009046	WDR43	100	86.070	Equus_asinus_asinus
ENSRNOG00000026316	Wdr43	100	79.032	ENSECAG00000023777	WDR43	100	80.059	Equus_caballus
ENSRNOG00000026316	Wdr43	87	88.000	ENSEEUG00000006044	WDR43	82	88.000	Erinaceus_europaeus
ENSRNOG00000026316	Wdr43	100	56.406	ENSELUG00000019806	wdr43	96	56.112	Esox_lucius
ENSRNOG00000026316	Wdr43	100	82.794	ENSFCAG00000018872	WDR43	100	85.756	Felis_catus
ENSRNOG00000026316	Wdr43	87	66.723	ENSFALG00000011213	WDR43	99	65.890	Ficedula_albicollis
ENSRNOG00000026316	Wdr43	100	85.503	ENSFDAG00000007446	WDR43	100	86.686	Fukomys_damarensis
ENSRNOG00000026316	Wdr43	90	55.537	ENSFHEG00000021863	wdr43	98	53.812	Fundulus_heteroclitus
ENSRNOG00000026316	Wdr43	93	53.594	ENSGMOG00000001695	wdr43	100	52.994	Gadus_morhua
ENSRNOG00000026316	Wdr43	99	65.527	ENSGALG00000032529	WDR43	100	65.689	Gallus_gallus
ENSRNOG00000026316	Wdr43	89	54.828	ENSGAFG00000019525	wdr43	98	53.363	Gambusia_affinis
ENSRNOG00000026316	Wdr43	98	52.844	ENSGACG00000012843	wdr43	100	52.695	Gasterosteus_aculeatus
ENSRNOG00000026316	Wdr43	100	87.574	ENSGGOG00000015956	WDR43	100	87.130	Gorilla_gorilla
ENSRNOG00000026316	Wdr43	99	52.897	ENSHBUG00000011585	wdr43	96	52.855	Haplochromis_burtoni
ENSRNOG00000026316	Wdr43	100	86.303	ENSHGLG00000006912	WDR43	100	87.040	Heterocephalus_glaber_female
ENSRNOG00000026316	Wdr43	100	86.303	ENSHGLG00100007455	WDR43	100	87.040	Heterocephalus_glaber_male
ENSRNOG00000026316	Wdr43	100	52.041	ENSHCOG00000001160	wdr43	100	51.895	Hippocampus_comes
ENSRNOG00000026316	Wdr43	99	52.847	ENSIPUG00000015564	wdr43	100	53.061	Ictalurus_punctatus
ENSRNOG00000026316	Wdr43	100	86.324	ENSSTOG00000014687	WDR43	100	87.647	Ictidomys_tridecemlineatus
ENSRNOG00000026316	Wdr43	89	84.628	ENSJJAG00000012314	-	97	85.124	Jaculus_jaculus
ENSRNOG00000026316	Wdr43	97	83.460	ENSJJAG00000016353	-	100	82.596	Jaculus_jaculus
ENSRNOG00000026316	Wdr43	92	55.892	ENSKMAG00000009301	wdr43	100	53.734	Kryptolebias_marmoratus
ENSRNOG00000026316	Wdr43	100	52.562	ENSLBEG00000022773	wdr43	100	52.555	Labrus_bergylta
ENSRNOG00000026316	Wdr43	97	61.769	ENSLACG00000012425	WDR43	98	60.709	Latimeria_chalumnae
ENSRNOG00000026316	Wdr43	92	87.279	ENSLAFG00000005457	WDR43	100	87.279	Loxodonta_africana
ENSRNOG00000026316	Wdr43	100	85.988	ENSMFAG00000031243	WDR43	100	87.611	Macaca_fascicularis
ENSRNOG00000026316	Wdr43	100	85.988	ENSMMUG00000022268	WDR43	100	87.611	Macaca_mulatta
ENSRNOG00000026316	Wdr43	100	85.841	ENSMNEG00000035036	WDR43	100	87.463	Macaca_nemestrina
ENSRNOG00000026316	Wdr43	99	77.827	ENSMLEG00000022852	WDR43	91	84.591	Mandrillus_leucophaeus
ENSRNOG00000026316	Wdr43	92	54.952	ENSMAMG00000014056	wdr43	100	52.616	Mastacembelus_armatus
ENSRNOG00000026316	Wdr43	99	52.671	ENSMZEG00005009095	wdr43	100	52.855	Maylandia_zebra
ENSRNOG00000026316	Wdr43	87	68.074	ENSMGAG00000005248	WDR43	99	68.220	Meleagris_gallopavo
ENSRNOG00000026316	Wdr43	100	83.088	ENSMAUG00000007339	Wdr43	100	84.706	Mesocricetus_auratus
ENSRNOG00000026316	Wdr43	100	84.141	ENSMICG00000014276	WDR43	100	85.903	Microcebus_murinus
ENSRNOG00000026316	Wdr43	100	90.356	ENSMOCG00000017279	Wdr43	100	90.356	Microtus_ochrogaster
ENSRNOG00000026316	Wdr43	100	50.585	ENSMMOG00000004782	wdr43	100	50.293	Mola_mola
ENSRNOG00000026316	Wdr43	100	74.599	ENSMODG00000015545	WDR43	100	75.877	Monodelphis_domestica
ENSRNOG00000026316	Wdr43	69	50.000	ENSMALG00000007866	wdr43	100	49.588	Monopterus_albus
ENSRNOG00000026316	Wdr43	100	90.708	MGP_CAROLIEiJ_G0021861	Wdr43	100	91.150	Mus_caroli
ENSRNOG00000026316	Wdr43	100	90.855	ENSMUSG00000041057	Wdr43	100	91.298	Mus_musculus
ENSRNOG00000026316	Wdr43	99	91.742	MGP_PahariEiJ_G0020848	Wdr43	100	92.296	Mus_pahari
ENSRNOG00000026316	Wdr43	100	90.708	MGP_SPRETEiJ_G0022772	Wdr43	100	91.150	Mus_spretus
ENSRNOG00000026316	Wdr43	100	82.845	ENSMPUG00000017985	WDR43	100	85.484	Mustela_putorius_furo
ENSRNOG00000026316	Wdr43	100	79.499	ENSMLUG00000010666	WDR43	100	83.063	Myotis_lucifugus
ENSRNOG00000026316	Wdr43	99	88.972	ENSNGAG00000004446	Wdr43	100	89.853	Nannospalax_galili
ENSRNOG00000026316	Wdr43	99	52.819	ENSNBRG00000011062	wdr43	100	53.001	Neolamprologus_brichardi
ENSRNOG00000026316	Wdr43	100	85.546	ENSNLEG00000015361	WDR43	100	87.168	Nomascus_leucogenys
ENSRNOG00000026316	Wdr43	89	70.000	ENSOPRG00000007219	WDR43	100	71.215	Ochotona_princeps
ENSRNOG00000026316	Wdr43	100	85.988	ENSODEG00000006870	WDR43	100	87.316	Octodon_degus
ENSRNOG00000026316	Wdr43	99	53.412	ENSONIG00000019540	wdr43	100	52.975	Oreochromis_niloticus
ENSRNOG00000026316	Wdr43	89	69.091	ENSOANG00000014467	WDR43	100	68.264	Ornithorhynchus_anatinus
ENSRNOG00000026316	Wdr43	91	87.642	ENSOCUG00000003126	WDR43	93	87.031	Oryctolagus_cuniculus
ENSRNOG00000026316	Wdr43	92	54.167	ENSORLG00000018236	wdr43	100	52.276	Oryzias_latipes
ENSRNOG00000026316	Wdr43	93	53.662	ENSORLG00020008182	wdr43	100	51.836	Oryzias_latipes_hni
ENSRNOG00000026316	Wdr43	92	54.019	ENSORLG00015005256	wdr43	100	52.129	Oryzias_latipes_hsok
ENSRNOG00000026316	Wdr43	92	53.698	ENSOMEG00000009928	wdr43	92	51.684	Oryzias_melastigma
ENSRNOG00000026316	Wdr43	99	85.141	ENSOGAG00000009879	WDR43	97	86.471	Otolemur_garnettii
ENSRNOG00000026316	Wdr43	73	83.200	ENSOARG00000019566	WDR43	100	84.800	Ovis_aries
ENSRNOG00000026316	Wdr43	89	83.555	ENSPPAG00000041978	WDR43	100	85.548	Pan_paniscus
ENSRNOG00000026316	Wdr43	100	82.222	ENSPPRG00000001900	WDR43	100	82.815	Panthera_pardus
ENSRNOG00000026316	Wdr43	100	82.111	ENSPTIG00000005982	WDR43	100	83.138	Panthera_tigris_altaica
ENSRNOG00000026316	Wdr43	100	85.229	ENSPTRG00000011792	WDR43	100	87.001	Pan_troglodytes
ENSRNOG00000026316	Wdr43	100	85.988	ENSPANG00000018846	WDR43	100	87.611	Papio_anubis
ENSRNOG00000026316	Wdr43	100	53.869	ENSPKIG00000022935	wdr43	100	53.139	Paramormyrops_kingsleyae
ENSRNOG00000026316	Wdr43	73	67.203	ENSPSIG00000014217	WDR43	100	66.801	Pelodiscus_sinensis
ENSRNOG00000026316	Wdr43	100	49.560	ENSPMGG00000001169	wdr43	100	49.853	Periophthalmus_magnuspinnatus
ENSRNOG00000026316	Wdr43	100	90.044	ENSPEMG00000021715	Wdr43	100	90.337	Peromyscus_maniculatus_bairdii
ENSRNOG00000026316	Wdr43	88	51.329	ENSPMAG00000006054	wdr43	99	51.342	Petromyzon_marinus
ENSRNOG00000026316	Wdr43	89	77.409	ENSPCIG00000011948	WDR43	98	75.594	Phascolarctos_cinereus
ENSRNOG00000026316	Wdr43	89	54.337	ENSPFOG00000011371	wdr43	98	52.844	Poecilia_formosa
ENSRNOG00000026316	Wdr43	89	54.501	ENSPLAG00000002041	wdr43	98	52.994	Poecilia_latipinna
ENSRNOG00000026316	Wdr43	89	54.337	ENSPMEG00000020902	wdr43	98	54.664	Poecilia_mexicana
ENSRNOG00000026316	Wdr43	90	54.323	ENSPREG00000004959	wdr43	98	52.915	Poecilia_reticulata
ENSRNOG00000026316	Wdr43	99	85.544	ENSPPYG00000012526	WDR43	94	87.316	Pongo_abelii
ENSRNOG00000026316	Wdr43	99	75.298	ENSPCAG00000011610	WDR43	97	77.239	Procavia_capensis
ENSRNOG00000026316	Wdr43	100	85.022	ENSPCOG00000000476	WDR43	100	86.344	Propithecus_coquereli
ENSRNOG00000026316	Wdr43	99	75.929	ENSPVAG00000013850	WDR43	94	78.792	Pteropus_vampyrus
ENSRNOG00000026316	Wdr43	99	52.671	ENSPNYG00000023080	wdr43	100	52.855	Pundamilia_nyererei
ENSRNOG00000026316	Wdr43	100	54.227	ENSPNAG00000023664	wdr43	100	53.515	Pygocentrus_nattereri
ENSRNOG00000026316	Wdr43	100	85.841	ENSRBIG00000026670	WDR43	100	87.316	Rhinopithecus_bieti
ENSRNOG00000026316	Wdr43	100	85.841	ENSRROG00000035929	WDR43	100	87.316	Rhinopithecus_roxellana
ENSRNOG00000026316	Wdr43	100	84.808	ENSSBOG00000021596	WDR43	100	86.136	Saimiri_boliviensis_boliviensis
ENSRNOG00000026316	Wdr43	89	77.333	ENSSHAG00000009672	WDR43	96	76.755	Sarcophilus_harrisii
ENSRNOG00000026316	Wdr43	100	54.307	ENSSFOG00015007173	wdr43	90	54.651	Scleropages_formosus
ENSRNOG00000026316	Wdr43	94	42.723	ENSSFOG00015004013	-	100	41.593	Scleropages_formosus
ENSRNOG00000026316	Wdr43	99	52.655	ENSSMAG00000015328	wdr43	100	52.778	Scophthalmus_maximus
ENSRNOG00000026316	Wdr43	92	54.921	ENSSDUG00000018532	wdr43	100	53.509	Seriola_dumerili
ENSRNOG00000026316	Wdr43	92	53.968	ENSSLDG00000015626	wdr43	100	54.602	Seriola_lalandi_dorsalis
ENSRNOG00000026316	Wdr43	71	90.833	ENSSARG00000013358	WDR43	78	90.361	Sorex_araneus
ENSRNOG00000026316	Wdr43	100	65.643	ENSSPUG00000006260	WDR43	100	65.936	Sphenodon_punctatus
ENSRNOG00000026316	Wdr43	92	53.492	ENSSPAG00000002830	wdr43	91	54.441	Stegastes_partitus
ENSRNOG00000026316	Wdr43	100	84.581	ENSSSCG00000008536	WDR43	100	85.463	Sus_scrofa
ENSRNOG00000026316	Wdr43	96	64.526	ENSTGUG00000005464	WDR43	100	64.873	Taeniopygia_guttata
ENSRNOG00000026316	Wdr43	92	53.968	ENSTRUG00000009764	wdr43	100	51.901	Takifugu_rubripes
ENSRNOG00000026316	Wdr43	96	53.544	ENSTNIG00000008907	wdr43	100	52.326	Tetraodon_nigroviridis
ENSRNOG00000026316	Wdr43	78	88.213	ENSTBEG00000007577	WDR43	99	88.168	Tupaia_belangeri
ENSRNOG00000026316	Wdr43	89	82.587	ENSTTRG00000008268	WDR43	84	85.572	Tursiops_truncatus
ENSRNOG00000026316	Wdr43	100	83.578	ENSUAMG00000015504	WDR43	100	85.924	Ursus_americanus
ENSRNOG00000026316	Wdr43	100	83.578	ENSUMAG00000020071	WDR43	100	85.924	Ursus_maritimus
ENSRNOG00000026316	Wdr43	72	73.668	ENSVPAG00000001632	WDR43	68	77.429	Vicugna_pacos
ENSRNOG00000026316	Wdr43	92	88.511	ENSVVUG00000002890	WDR43	99	88.511	Vulpes_vulpes
ENSRNOG00000026316	Wdr43	83	56.063	ENSXCOG00000011240	wdr43	98	51.424	Xiphophorus_couchianus
ENSRNOG00000026316	Wdr43	89	54.501	ENSXMAG00000018379	wdr43	98	53.134	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001650	fibrillar center	-	IEA	Component
GO:0001650	fibrillar center	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0045943	positive regulation of transcription by RNA polymerase I	-	IEA	Process
GO:0045943	positive regulation of transcription by RNA polymerase I	-	ISO	Process
GO:2000234	positive regulation of rRNA processing	-	IEA	Process
GO:2000234	positive regulation of rRNA processing	-	ISO	Process