EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000026403 (Gene tree)
Gene ID: 306387
Gene Symbol: Naf1
Alias: LOC306387|RGD1306802
Full Name: nuclear assembly factor 1 ribonucleoprotein
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 34055 bases
Position: chr16:24578678-24612732
Accession: 1306802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000073463	Gar1	PF04410.14	6.9e-46	1	1
ENSRNOP00000031163	Gar1	PF04410.14	8.7e-46	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000081686	-	5490	-	ENSRNOP00000073463	408 (aa)	XP_017455590	A0A0G2K5K8
ENSRNOT00000033916	-	2123	-	ENSRNOP00000031163	452 (aa)	-	F1LMR4

Gene Model

Click here to download ENSRNOG00000026403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000026403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000026403	Naf1	98	71.659	ENSG00000145414	NAF1	95	92.500	Homo_sapiens
ENSRNOG00000026403	Naf1	98	75.297	ENSAMEG00000014688	NAF1	100	73.196	Ailuropoda_melanoleuca
ENSRNOG00000026403	Naf1	57	44.186	ENSATEG00000003514	-	54	41.234	Anabas_testudineus
ENSRNOG00000026403	Naf1	70	57.679	ENSAPLG00000003210	NAF1	85	57.288	Anas_platyrhynchos
ENSRNOG00000026403	Naf1	96	71.363	ENSANAG00000025253	NAF1	93	92.500	Aotus_nancymaae
ENSRNOG00000026403	Naf1	84	75.000	ENSBTAG00000034700	NAF1	95	76.136	Bos_taurus
ENSRNOG00000026403	Naf1	96	68.444	ENSCJAG00000012406	NAF1	95	90.000	Callithrix_jacchus
ENSRNOG00000026403	Naf1	63	77.627	ENSCAFG00000029679	NAF1	99	77.966	Canis_familiaris
ENSRNOG00000026403	Naf1	98	73.250	ENSCAFG00020005334	NAF1	100	70.701	Canis_lupus_dingo
ENSRNOG00000026403	Naf1	56	90.435	ENSCHIG00000018430	NAF1	91	76.504	Capra_hircus
ENSRNOG00000026403	Naf1	76	78.992	ENSTSYG00000005946	NAF1	88	94.737	Carlito_syrichta
ENSRNOG00000026403	Naf1	76	79.320	ENSCAPG00000017838	NAF1	94	79.037	Cavia_aperea
ENSRNOG00000026403	Naf1	100	69.433	ENSCPOG00000010331	NAF1	100	68.410	Cavia_porcellus
ENSRNOG00000026403	Naf1	98	71.954	ENSCCAG00000030023	NAF1	95	92.500	Cebus_capucinus
ENSRNOG00000026403	Naf1	100	68.876	ENSCATG00000022663	NAF1	95	92.500	Cercocebus_atys
ENSRNOG00000026403	Naf1	100	72.609	ENSCLAG00000017209	NAF1	100	72.570	Chinchilla_lanigera
ENSRNOG00000026403	Naf1	100	69.478	ENSCSAG00000003199	NAF1	100	70.518	Chlorocebus_sabaeus
ENSRNOG00000026403	Naf1	62	83.465	ENSCHOG00000011393	NAF1	57	81.818	Choloepus_hoffmanni
ENSRNOG00000026403	Naf1	63	59.701	ENSCPBG00000003379	NAF1	92	49.657	Chrysemys_picta_bellii
ENSRNOG00000026403	Naf1	100	69.138	ENSCANG00000039151	NAF1	95	92.500	Colobus_angolensis_palliatus
ENSRNOG00000026403	Naf1	100	85.313	ENSCGRG00001018484	Naf1	100	84.449	Cricetulus_griseus_chok1gshd
ENSRNOG00000026403	Naf1	71	91.003	ENSCGRG00000001742	Naf1	83	92.388	Cricetulus_griseus_crigri
ENSRNOG00000026403	Naf1	68	47.143	ENSDARG00000057929	naf1	54	46.341	Danio_rerio
ENSRNOG00000026403	Naf1	98	72.430	ENSDNOG00000031106	NAF1	100	71.748	Dasypus_novemcinctus
ENSRNOG00000026403	Naf1	71	86.458	ENSDORG00000011327	Naf1	100	76.638	Dipodomys_ordii
ENSRNOG00000026403	Naf1	75	50.568	ENSETEG00000002872	-	87	51.163	Echinops_telfairi
ENSRNOG00000026403	Naf1	100	70.707	ENSEASG00005022201	NAF1	100	71.111	Equus_asinus_asinus
ENSRNOG00000026403	Naf1	100	70.303	ENSECAG00000016738	NAF1	100	70.707	Equus_caballus
ENSRNOG00000026403	Naf1	75	66.978	ENSEEUG00000008335	-	99	67.290	Erinaceus_europaeus
ENSRNOG00000026403	Naf1	100	68.980	ENSFCAG00000031652	NAF1	100	70.988	Felis_catus
ENSRNOG00000026403	Naf1	69	57.241	ENSFALG00000011110	NAF1	66	55.663	Ficedula_albicollis
ENSRNOG00000026403	Naf1	100	74.514	ENSFDAG00000007497	NAF1	100	74.105	Fukomys_damarensis
ENSRNOG00000026403	Naf1	61	46.586	ENSFHEG00000015835	-	57	44.170	Fundulus_heteroclitus
ENSRNOG00000026403	Naf1	69	56.376	ENSGALG00000009496	NAF1	69	57.333	Gallus_gallus
ENSRNOG00000026403	Naf1	98	72.120	ENSGGOG00000000894	NAF1	95	92.500	Gorilla_gorilla
ENSRNOG00000026403	Naf1	100	70.576	ENSHGLG00000014899	NAF1	100	72.222	Heterocephalus_glaber_female
ENSRNOG00000026403	Naf1	100	70.576	ENSHGLG00100007507	NAF1	100	72.222	Heterocephalus_glaber_male
ENSRNOG00000026403	Naf1	100	72.951	ENSSTOG00000023858	NAF1	100	73.415	Ictidomys_tridecemlineatus
ENSRNOG00000026403	Naf1	71	82.007	ENSJJAG00000012147	-	94	78.488	Jaculus_jaculus
ENSRNOG00000026403	Naf1	63	39.934	ENSKMAG00000005434	-	52	41.111	Kryptolebias_marmoratus
ENSRNOG00000026403	Naf1	56	47.577	ENSLBEG00000020414	-	55	44.402	Labrus_bergylta
ENSRNOG00000026403	Naf1	56	49.782	ENSLACG00000004353	-	66	50.000	Latimeria_chalumnae
ENSRNOG00000026403	Naf1	73	43.768	ENSLOCG00000007989	NAF1	76	48.534	Lepisosteus_oculatus
ENSRNOG00000026403	Naf1	76	68.847	ENSLAFG00000009193	-	100	70.898	Loxodonta_africana
ENSRNOG00000026403	Naf1	100	68.876	ENSMFAG00000040952	NAF1	95	92.500	Macaca_fascicularis
ENSRNOG00000026403	Naf1	100	68.675	ENSMMUG00000001717	NAF1	95	92.500	Macaca_mulatta
ENSRNOG00000026403	Naf1	100	68.876	ENSMNEG00000032677	NAF1	95	92.500	Macaca_nemestrina
ENSRNOG00000026403	Naf1	100	69.556	ENSMLEG00000035330	NAF1	95	92.500	Mandrillus_leucophaeus
ENSRNOG00000026403	Naf1	68	57.746	ENSMGAG00000002133	NAF1	92	57.239	Meleagris_gallopavo
ENSRNOG00000026403	Naf1	100	76.754	ENSMAUG00000013072	Naf1	100	80.263	Mesocricetus_auratus
ENSRNOG00000026403	Naf1	100	69.758	ENSMICG00000038661	NAF1	91	92.308	Microcebus_murinus
ENSRNOG00000026403	Naf1	100	84.483	ENSMOCG00000010360	Naf1	100	85.345	Microtus_ochrogaster
ENSRNOG00000026403	Naf1	55	53.947	ENSMODG00000028980	-	54	51.807	Monodelphis_domestica
ENSRNOG00000026403	Naf1	100	70.819	MGP_CAROLIEiJ_G0031097	Naf1	89	84.615	Mus_caroli
ENSRNOG00000026403	Naf1	98	90.090	ENSMUSG00000014907	Naf1	88	81.858	Mus_musculus
ENSRNOG00000026403	Naf1	100	80.123	MGP_PahariEiJ_G0021563	-	100	80.328	Mus_pahari
ENSRNOG00000026403	Naf1	98	77.523	MGP_SPRETEiJ_G0032213	-	94	78.507	Mus_spretus
ENSRNOG00000026403	Naf1	100	70.902	ENSMPUG00000001861	NAF1	100	71.107	Mustela_putorius_furo
ENSRNOG00000026403	Naf1	98	71.971	ENSMLUG00000004627	NAF1	100	68.378	Myotis_lucifugus
ENSRNOG00000026403	Naf1	100	79.570	ENSNGAG00000023833	Naf1	100	79.355	Nannospalax_galili
ENSRNOG00000026403	Naf1	86	73.057	ENSNLEG00000006459	-	95	92.500	Nomascus_leucogenys
ENSRNOG00000026403	Naf1	100	74.034	ENSODEG00000006528	NAF1	100	73.820	Octodon_degus
ENSRNOG00000026403	Naf1	63	73.946	ENSOANG00000014157	-	76	69.128	Ornithorhynchus_anatinus
ENSRNOG00000026403	Naf1	100	69.342	ENSOCUG00000000485	NAF1	100	68.107	Oryctolagus_cuniculus
ENSRNOG00000026403	Naf1	60	47.541	ENSORLG00000002191	-	60	44.558	Oryzias_latipes
ENSRNOG00000026403	Naf1	60	47.541	ENSORLG00020013478	-	60	44.558	Oryzias_latipes_hni
ENSRNOG00000026403	Naf1	66	41.667	ENSORLG00015012985	-	57	40.964	Oryzias_latipes_hsok
ENSRNOG00000026403	Naf1	61	43.775	ENSOMEG00000021322	-	56	42.034	Oryzias_melastigma
ENSRNOG00000026403	Naf1	98	72.953	ENSOARG00000013716	NAF1	100	71.306	Ovis_aries
ENSRNOG00000026403	Naf1	98	71.889	ENSPPAG00000034674	NAF1	95	92.500	Pan_paniscus
ENSRNOG00000026403	Naf1	100	68.367	ENSPPRG00000003688	NAF1	100	71.458	Panthera_pardus
ENSRNOG00000026403	Naf1	100	68.367	ENSPTIG00000017246	NAF1	100	71.458	Panthera_tigris_altaica
ENSRNOG00000026403	Naf1	98	71.889	ENSPTRG00000016560	NAF1	95	92.500	Pan_troglodytes
ENSRNOG00000026403	Naf1	100	68.675	ENSPANG00000015574	NAF1	95	92.500	Papio_anubis
ENSRNOG00000026403	Naf1	63	60.821	ENSPSIG00000006545	NAF1	80	58.361	Pelodiscus_sinensis
ENSRNOG00000026403	Naf1	80	88.011	ENSPEMG00000014321	Naf1	91	88.761	Peromyscus_maniculatus_bairdii
ENSRNOG00000026403	Naf1	54	51.818	ENSPFOG00000010705	-	62	50.862	Poecilia_formosa
ENSRNOG00000026403	Naf1	54	48.182	ENSPMEG00000004437	-	59	43.464	Poecilia_mexicana
ENSRNOG00000026403	Naf1	63	80.479	ENSPPYG00000029771	-	99	82.192	Pongo_abelii
ENSRNOG00000026403	Naf1	100	66.129	ENSPVAG00000016222	NAF1	100	68.347	Pteropus_vampyrus
ENSRNOG00000026403	Naf1	99	70.068	ENSRBIG00000030027	NAF1	95	92.500	Rhinopithecus_bieti
ENSRNOG00000026403	Naf1	100	69.293	ENSRROG00000040912	NAF1	95	92.500	Rhinopithecus_roxellana
ENSRNOG00000026403	Naf1	98	70.805	ENSSBOG00000002085	NAF1	95	92.500	Saimiri_boliviensis_boliviensis
ENSRNOG00000026403	Naf1	74	48.800	ENSSFOG00015014207	naf1	64	44.186	Scleropages_formosus
ENSRNOG00000026403	Naf1	51	51.196	ENSSMAG00000015529	-	62	45.556	Scophthalmus_maximus
ENSRNOG00000026403	Naf1	60	63.095	ENSSPUG00000004087	NAF1	99	57.605	Sphenodon_punctatus
ENSRNOG00000026403	Naf1	98	70.192	ENSSSCG00000008887	NAF1	100	68.125	Sus_scrofa
ENSRNOG00000026403	Naf1	50	87.879	ENSTBEG00000017005	-	61	87.879	Tupaia_belangeri
ENSRNOG00000026403	Naf1	100	70.172	ENSTTRG00000010106	NAF1	100	70.386	Tursiops_truncatus
ENSRNOG00000026403	Naf1	100	71.663	ENSUAMG00000017043	NAF1	100	71.869	Ursus_americanus
ENSRNOG00000026403	Naf1	100	71.663	ENSUMAG00000019748	NAF1	100	71.869	Ursus_maritimus
ENSRNOG00000026403	Naf1	56	89.956	ENSVPAG00000007182	-	91	89.956	Vicugna_pacos
ENSRNOG00000026403	Naf1	76	78.187	ENSVVUG00000022303	NAF1	96	78.470	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000493	box H/ACA snoRNP assembly	21873635.	IBA	Process
GO:0000493	box H/ACA snoRNP assembly	-	IEA	Process
GO:0001522	pseudouridine synthesis	-	IEA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0003723	RNA binding	-	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005732	small nucleolar ribonucleoprotein complex	21873635.	IBA	Component
GO:0005732	small nucleolar ribonucleoprotein complex	-	IEA	Component
GO:0005732	small nucleolar ribonucleoprotein complex	-	ISO	Component
GO:0005732	small nucleolar ribonucleoprotein complex	-	ISS	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0042254	ribosome biogenesis	21873635.	IBA	Process
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0042254	ribosome biogenesis	-	ISO	Process
GO:0042254	ribosome biogenesis	-	ISS	Process
GO:0043489	RNA stabilization	-	ISO	Process
GO:0051973	positive regulation of telomerase activity	-	IEA	Process
GO:0051973	positive regulation of telomerase activity	-	ISO	Process
GO:0070034	telomerase RNA binding	-	IEA	Function
GO:0070034	telomerase RNA binding	-	ISO	Function
GO:0090669	telomerase RNA stabilization	-	IEA	Process
GO:0090669	telomerase RNA stabilization	-	ISO	Process
GO:1904358	positive regulation of telomere maintenance via telomere lengthening	-	IEA	Process
GO:1904358	positive regulation of telomere maintenance via telomere lengthening	-	ISO	Process
GO:1905323	telomerase holoenzyme complex assembly	-	IEA	Process
GO:1905323	telomerase holoenzyme complex assembly	-	ISO	Process