EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000026636 (Gene tree)
Gene ID: 311840
Gene Symbol: Urm1
Alias: LOC311840|RGD1306599
Full Name: ubiquitin related modifier 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 16845 bases
Position: chr3:8389024-8405868
Accession: 1306599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000032608	Urm1	PF09138.11	1.3e-39	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000037494	-	1245	-	ENSRNOP00000032608	101 (aa)	-	B6ID11

Gene Model

Click here to download ENSRNOG00000026636's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04122	Sulfur relay system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000026636's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000026636	Urm1	100	94.059	ENSG00000167118	URM1	100	94.059	Homo_sapiens
ENSRNOG00000026636	Urm1	100	77.228	ENSAPOG00000009382	urm1	100	77.228	Acanthochromis_polyacanthus
ENSRNOG00000026636	Urm1	100	95.050	ENSAMEG00000015446	URM1	100	95.050	Ailuropoda_melanoleuca
ENSRNOG00000026636	Urm1	100	60.194	ENSACIG00000005345	urm1	100	60.194	Amphilophus_citrinellus
ENSRNOG00000026636	Urm1	100	78.218	ENSAPEG00000007448	urm1	100	78.218	Amphiprion_percula
ENSRNOG00000026636	Urm1	100	77.228	ENSATEG00000019659	urm1	100	77.228	Anabas_testudineus
ENSRNOG00000026636	Urm1	90	89.011	ENSAPLG00000008603	URM1	100	89.011	Anas_platyrhynchos
ENSRNOG00000026636	Urm1	100	81.188	ENSACAG00000010428	-	100	81.188	Anolis_carolinensis
ENSRNOG00000026636	Urm1	100	96.040	ENSANAG00000036717	URM1	100	96.040	Aotus_nancymaae
ENSRNOG00000026636	Urm1	100	80.198	ENSACLG00000022484	urm1	100	80.198	Astatotilapia_calliptera
ENSRNOG00000026636	Urm1	89	65.556	ENSAMXG00000042562	urm1	89	65.556	Astyanax_mexicanus
ENSRNOG00000026636	Urm1	100	95.050	ENSBTAG00000025612	URM1	100	95.050	Bos_taurus
ENSRNOG00000026636	Urm1	98	34.951	WBGene00185048	urm-1	99	34.951	Caenorhabditis_elegans
ENSRNOG00000026636	Urm1	100	97.030	ENSCJAG00000020036	URM1	100	97.030	Callithrix_jacchus
ENSRNOG00000026636	Urm1	100	96.040	ENSCAFG00000023618	URM1	100	96.040	Canis_familiaris
ENSRNOG00000026636	Urm1	64	93.846	ENSCHIG00000012547	-	67	93.846	Capra_hircus
ENSRNOG00000026636	Urm1	100	91.089	ENSTSYG00000028376	URM1	100	91.089	Carlito_syrichta
ENSRNOG00000026636	Urm1	64	96.923	ENSCAPG00000002189	-	100	96.923	Cavia_aperea
ENSRNOG00000026636	Urm1	100	97.030	ENSCPOG00000039069	URM1	100	97.030	Cavia_porcellus
ENSRNOG00000026636	Urm1	100	96.040	ENSCCAG00000032510	URM1	100	96.040	Cebus_capucinus
ENSRNOG00000026636	Urm1	100	96.040	ENSCATG00000033068	URM1	100	96.040	Cercocebus_atys
ENSRNOG00000026636	Urm1	100	97.030	ENSCLAG00000001791	URM1	100	97.030	Chinchilla_lanigera
ENSRNOG00000026636	Urm1	78	96.203	ENSCSAG00000014200	URM1	54	96.203	Chlorocebus_sabaeus
ENSRNOG00000026636	Urm1	100	86.139	ENSCPBG00000025196	URM1	100	86.139	Chrysemys_picta_bellii
ENSRNOG00000026636	Urm1	100	96.040	ENSCANG00000012760	URM1	100	96.040	Colobus_angolensis_palliatus
ENSRNOG00000026636	Urm1	100	96.040	ENSCGRG00001023888	Urm1	100	96.040	Cricetulus_griseus_chok1gshd
ENSRNOG00000026636	Urm1	100	96.040	ENSCGRG00000005358	Urm1	100	96.040	Cricetulus_griseus_crigri
ENSRNOG00000026636	Urm1	100	80.198	ENSCSEG00000016193	urm1	100	80.198	Cynoglossus_semilaevis
ENSRNOG00000026636	Urm1	84	67.059	ENSCVAG00000011864	urm1	77	67.059	Cyprinodon_variegatus
ENSRNOG00000026636	Urm1	100	77.228	ENSDARG00000091198	urm1	100	77.228	Danio_rerio
ENSRNOG00000026636	Urm1	80	91.358	ENSDNOG00000039086	URM1	56	92.405	Dasypus_novemcinctus
ENSRNOG00000026636	Urm1	100	92.079	ENSDORG00000028424	Urm1	100	92.079	Dipodomys_ordii
ENSRNOG00000026636	Urm1	100	62.745	FBgn0053276	Urm1	100	62.745	Drosophila_melanogaster
ENSRNOG00000026636	Urm1	100	90.099	ENSETEG00000000039	-	100	90.099	Echinops_telfairi
ENSRNOG00000026636	Urm1	64	98.462	ENSEASG00005016204	-	60	98.462	Equus_asinus_asinus
ENSRNOG00000026636	Urm1	100	94.059	ENSEEUG00000012945	URM1	100	94.059	Erinaceus_europaeus
ENSRNOG00000026636	Urm1	100	77.228	ENSELUG00000006757	URM1	100	77.228	Esox_lucius
ENSRNOG00000026636	Urm1	100	95.050	ENSFCAG00000005842	URM1	100	95.050	Felis_catus
ENSRNOG00000026636	Urm1	90	86.813	ENSFALG00000001360	URM1	100	86.813	Ficedula_albicollis
ENSRNOG00000026636	Urm1	100	97.030	ENSFDAG00000013113	URM1	100	97.030	Fukomys_damarensis
ENSRNOG00000026636	Urm1	100	75.248	ENSGMOG00000006245	urm1	100	75.248	Gadus_morhua
ENSRNOG00000026636	Urm1	100	86.139	ENSGALG00000004971	URM1	100	86.139	Gallus_gallus
ENSRNOG00000026636	Urm1	100	81.188	ENSGAFG00000007518	urm1	100	81.188	Gambusia_affinis
ENSRNOG00000026636	Urm1	100	79.208	ENSGACG00000017389	urm1	100	79.208	Gasterosteus_aculeatus
ENSRNOG00000026636	Urm1	100	86.139	ENSGAGG00000022865	URM1	100	86.139	Gopherus_agassizii
ENSRNOG00000026636	Urm1	100	94.059	ENSGGOG00000014806	URM1	100	94.059	Gorilla_gorilla
ENSRNOG00000026636	Urm1	100	81.188	ENSHBUG00000001440	urm1	100	81.188	Haplochromis_burtoni
ENSRNOG00000026636	Urm1	100	95.050	ENSHGLG00000016662	URM1	100	95.050	Heterocephalus_glaber_female
ENSRNOG00000026636	Urm1	100	95.050	ENSHGLG00100019392	URM1	100	95.050	Heterocephalus_glaber_male
ENSRNOG00000026636	Urm1	100	77.228	ENSHCOG00000002828	urm1	100	77.228	Hippocampus_comes
ENSRNOG00000026636	Urm1	100	80.198	ENSIPUG00000020621	urm1	55	80.198	Ictalurus_punctatus
ENSRNOG00000026636	Urm1	100	95.050	ENSSTOG00000025351	URM1	100	95.050	Ictidomys_tridecemlineatus
ENSRNOG00000026636	Urm1	100	88.119	ENSJJAG00000011074	-	100	88.119	Jaculus_jaculus
ENSRNOG00000026636	Urm1	100	96.040	ENSJJAG00000014799	-	100	96.040	Jaculus_jaculus
ENSRNOG00000026636	Urm1	100	77.228	ENSKMAG00000011433	urm1	100	77.228	Kryptolebias_marmoratus
ENSRNOG00000026636	Urm1	88	74.157	ENSLBEG00000004555	urm1	76	74.157	Labrus_bergylta
ENSRNOG00000026636	Urm1	100	78.218	ENSLACG00000016968	URM1	100	78.218	Latimeria_chalumnae
ENSRNOG00000026636	Urm1	100	77.228	ENSLOCG00000002768	urm1	100	77.228	Lepisosteus_oculatus
ENSRNOG00000026636	Urm1	100	94.175	ENSLAFG00000002178	URM1	100	94.175	Loxodonta_africana
ENSRNOG00000026636	Urm1	100	96.040	ENSMFAG00000035214	URM1	100	96.040	Macaca_fascicularis
ENSRNOG00000026636	Urm1	97	89.796	ENSMMUG00000018612	URM1	99	89.796	Macaca_mulatta
ENSRNOG00000026636	Urm1	100	96.040	ENSMLEG00000028542	URM1	100	96.040	Mandrillus_leucophaeus
ENSRNOG00000026636	Urm1	100	80.198	ENSMAMG00000008703	urm1	100	80.198	Mastacembelus_armatus
ENSRNOG00000026636	Urm1	100	80.198	ENSMZEG00005017191	urm1	100	80.198	Maylandia_zebra
ENSRNOG00000026636	Urm1	90	87.912	ENSMGAG00000003812	URM1	100	87.912	Meleagris_gallopavo
ENSRNOG00000026636	Urm1	100	94.059	ENSMAUG00000000479	Urm1	100	94.059	Mesocricetus_auratus
ENSRNOG00000026636	Urm1	100	95.050	ENSMICG00000042967	URM1	100	95.050	Microcebus_murinus
ENSRNOG00000026636	Urm1	100	94.059	ENSMOCG00000007365	Urm1	100	94.059	Microtus_ochrogaster
ENSRNOG00000026636	Urm1	100	80.198	ENSMMOG00000021296	urm1	100	80.198	Mola_mola
ENSRNOG00000026636	Urm1	100	90.099	ENSMODG00000023353	URM1	100	90.099	Monodelphis_domestica
ENSRNOG00000026636	Urm1	100	80.198	ENSMALG00000018227	urm1	100	80.198	Monopterus_albus
ENSRNOG00000026636	Urm1	100	98.020	MGP_CAROLIEiJ_G0023372	Urm1	100	98.020	Mus_caroli
ENSRNOG00000026636	Urm1	100	97.030	ENSMUSG00000069020	Urm1	100	97.030	Mus_musculus
ENSRNOG00000026636	Urm1	100	99.010	MGP_PahariEiJ_G0024829	Urm1	100	99.010	Mus_pahari
ENSRNOG00000026636	Urm1	100	99.010	MGP_SPRETEiJ_G0024289	Urm1	100	99.010	Mus_spretus
ENSRNOG00000026636	Urm1	100	96.040	ENSMPUG00000013184	URM1	100	96.040	Mustela_putorius_furo
ENSRNOG00000026636	Urm1	78	97.468	ENSMLUG00000007275	URM1	100	97.468	Myotis_lucifugus
ENSRNOG00000026636	Urm1	100	94.059	ENSNGAG00000007112	Urm1	100	94.059	Nannospalax_galili
ENSRNOG00000026636	Urm1	100	80.198	ENSNBRG00000009012	urm1	100	80.198	Neolamprologus_brichardi
ENSRNOG00000026636	Urm1	100	95.050	ENSNLEG00000031211	URM1	100	95.050	Nomascus_leucogenys
ENSRNOG00000026636	Urm1	100	91.089	ENSMEUG00000014147	-	100	91.089	Notamacropus_eugenii
ENSRNOG00000026636	Urm1	100	97.030	ENSOPRG00000002058	URM1	100	97.030	Ochotona_princeps
ENSRNOG00000026636	Urm1	100	95.050	ENSODEG00000017296	URM1	100	95.050	Octodon_degus
ENSRNOG00000026636	Urm1	100	80.198	ENSONIG00000003910	urm1	100	80.198	Oreochromis_niloticus
ENSRNOG00000026636	Urm1	96	83.505	ENSOANG00000003949	-	100	83.505	Ornithorhynchus_anatinus
ENSRNOG00000026636	Urm1	97	95.918	ENSOCUG00000008848	URM1	100	95.918	Oryctolagus_cuniculus
ENSRNOG00000026636	Urm1	100	82.178	ENSORLG00000024432	urm1	100	82.178	Oryzias_latipes
ENSRNOG00000026636	Urm1	100	81.188	ENSORLG00020000333	urm1	100	81.188	Oryzias_latipes_hni
ENSRNOG00000026636	Urm1	91	80.435	ENSORLG00015001370	urm1	68	80.435	Oryzias_latipes_hsok
ENSRNOG00000026636	Urm1	100	82.178	ENSOMEG00000023257	urm1	100	82.178	Oryzias_melastigma
ENSRNOG00000026636	Urm1	100	97.030	ENSOGAG00000001445	URM1	100	97.030	Otolemur_garnettii
ENSRNOG00000026636	Urm1	100	95.050	ENSOARG00000010218	URM1	100	95.050	Ovis_aries
ENSRNOG00000026636	Urm1	100	94.059	ENSPPAG00000030946	URM1	100	94.059	Pan_paniscus
ENSRNOG00000026636	Urm1	100	96.040	ENSPPRG00000008861	URM1	100	96.040	Panthera_pardus
ENSRNOG00000026636	Urm1	100	95.050	ENSPTIG00000012500	URM1	100	95.050	Panthera_tigris_altaica
ENSRNOG00000026636	Urm1	100	94.059	ENSPTRG00000021427	URM1	100	94.059	Pan_troglodytes
ENSRNOG00000026636	Urm1	100	96.040	ENSPANG00000025883	URM1	100	96.040	Papio_anubis
ENSRNOG00000026636	Urm1	100	75.248	ENSPKIG00000021455	urm1	100	75.248	Paramormyrops_kingsleyae
ENSRNOG00000026636	Urm1	100	84.158	ENSPSIG00000014442	URM1	100	84.158	Pelodiscus_sinensis
ENSRNOG00000026636	Urm1	78	82.278	ENSPMGG00000023974	urm1	67	82.278	Periophthalmus_magnuspinnatus
ENSRNOG00000026636	Urm1	100	78.218	ENSPMAG00000007668	urm1	100	78.218	Petromyzon_marinus
ENSRNOG00000026636	Urm1	97	88.776	ENSPCIG00000026786	-	87	88.776	Phascolarctos_cinereus
ENSRNOG00000026636	Urm1	100	81.188	ENSPFOG00000019694	urm1	100	81.188	Poecilia_formosa
ENSRNOG00000026636	Urm1	100	81.188	ENSPLAG00000021729	urm1	100	81.188	Poecilia_latipinna
ENSRNOG00000026636	Urm1	100	81.188	ENSPMEG00000009764	urm1	100	81.188	Poecilia_mexicana
ENSRNOG00000026636	Urm1	100	81.188	ENSPREG00000008611	urm1	100	81.188	Poecilia_reticulata
ENSRNOG00000026636	Urm1	100	93.069	ENSPPYG00000019649	-	100	93.069	Pongo_abelii
ENSRNOG00000026636	Urm1	78	96.203	ENSPCAG00000015239	URM1	100	96.203	Procavia_capensis
ENSRNOG00000026636	Urm1	100	95.050	ENSPCOG00000021449	URM1	100	95.050	Propithecus_coquereli
ENSRNOG00000026636	Urm1	100	95.050	ENSPVAG00000001227	URM1	100	95.050	Pteropus_vampyrus
ENSRNOG00000026636	Urm1	100	80.198	ENSPNYG00000012446	urm1	100	80.198	Pundamilia_nyererei
ENSRNOG00000026636	Urm1	100	80.198	ENSPNAG00000017145	urm1	100	80.198	Pygocentrus_nattereri
ENSRNOG00000026636	Urm1	100	96.040	ENSRBIG00000041054	URM1	100	96.040	Rhinopithecus_bieti
ENSRNOG00000026636	Urm1	100	96.040	ENSRROG00000038638	URM1	100	96.040	Rhinopithecus_roxellana
ENSRNOG00000026636	Urm1	96	43.434	YIL008W	-	99	43.434	Saccharomyces_cerevisiae
ENSRNOG00000026636	Urm1	100	97.030	ENSSBOG00000030293	URM1	100	97.030	Saimiri_boliviensis_boliviensis
ENSRNOG00000026636	Urm1	100	77.228	ENSSFOG00015000673	urm1	56	77.228	Scleropages_formosus
ENSRNOG00000026636	Urm1	100	79.208	ENSSMAG00000019927	urm1	100	79.208	Scophthalmus_maximus
ENSRNOG00000026636	Urm1	100	80.198	ENSSDUG00000000566	urm1	100	80.198	Seriola_dumerili
ENSRNOG00000026636	Urm1	100	80.198	ENSSLDG00000012250	urm1	100	80.198	Seriola_lalandi_dorsalis
ENSRNOG00000026636	Urm1	100	83.168	ENSSPUG00000015548	URM1	100	83.168	Sphenodon_punctatus
ENSRNOG00000026636	Urm1	100	80.198	ENSSPAG00000001097	urm1	100	80.198	Stegastes_partitus
ENSRNOG00000026636	Urm1	100	96.040	ENSSSCG00000005649	URM1	100	96.040	Sus_scrofa
ENSRNOG00000026636	Urm1	90	86.813	ENSTGUG00000003654	URM1	100	86.813	Taeniopygia_guttata
ENSRNOG00000026636	Urm1	100	80.198	ENSTRUG00000008530	urm1	100	80.198	Takifugu_rubripes
ENSRNOG00000026636	Urm1	100	77.451	ENSTNIG00000013204	urm1	100	77.451	Tetraodon_nigroviridis
ENSRNOG00000026636	Urm1	100	70.297	ENSTBEG00000002675	-	100	70.297	Tupaia_belangeri
ENSRNOG00000026636	Urm1	100	94.059	ENSTTRG00000016490	URM1	100	94.059	Tursiops_truncatus
ENSRNOG00000026636	Urm1	100	94.059	ENSUAMG00000020279	URM1	100	94.059	Ursus_americanus
ENSRNOG00000026636	Urm1	78	93.671	ENSUMAG00000022029	-	78	93.671	Ursus_maritimus
ENSRNOG00000026636	Urm1	64	83.077	ENSXCOG00000004982	urm1	80	83.077	Xiphophorus_couchianus
ENSRNOG00000026636	Urm1	100	81.188	ENSXMAG00000001680	urm1	100	81.188	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002098	tRNA wobble uridine modification	-	IEA	Process
GO:0002098	tRNA wobble uridine modification	-	ISO	Process
GO:0005829	cytosol	-	IEA	Component
GO:0032447	protein urmylation	-	IEA	Process
GO:0034227	tRNA thio-modification	-	IEA	Process
GO:0034227	tRNA thio-modification	-	ISO	Process
GO:0097163	sulfur carrier activity	-	IEA	Function
GO:0097163	sulfur carrier activity	-	ISO	Function