EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000026686 (Gene tree)
Gene ID: 310090
Gene Symbol: Ddx4
Alias: LOC310090|RVLG
Full Name: DEAD-box helicase 4
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 56782 bases
Position: chr2:44447573-44504354
Accession: 1308793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000013035	DEAD	PF00270.29	2.3e-49	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000013035	-	3030	-	ENSRNOP00000013035	708 (aa)	-	F1LQD1

Gene Model

Click here to download ENSRNOG00000026686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000026686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000026686	Ddx4	56	38.765	ENSRNOG00000012771	Ddx41	64	38.765
ENSRNOG00000026686	Ddx4	55	31.008	ENSRNOG00000045791	Eif4a3	90	30.769
ENSRNOG00000026686	Ddx4	71	49.038	ENSRNOG00000023383	Ddx3x	66	52.370
ENSRNOG00000026686	Ddx4	53	38.786	ENSRNOG00000042451	Ddx59	59	38.786
ENSRNOG00000026686	Ddx4	61	52.596	ENSRNOG00000002501	Ddx3y	65	52.546
ENSRNOG00000026686	Ddx4	55	34.336	ENSRNOG00000022368	Ddx49	78	34.336
ENSRNOG00000026686	Ddx4	56	35.036	ENSRNOG00000002612	Ddx52	66	34.550
ENSRNOG00000026686	Ddx4	51	31.088	ENSRNOG00000018033	Ddx19a	75	31.088
ENSRNOG00000026686	Ddx4	56	39.163	ENSRNOG00000051170	Ddx17	61	39.163
ENSRNOG00000026686	Ddx4	50	33.056	ENSRNOG00000053932	Ddx6	71	33.056
ENSRNOG00000026686	Ddx4	70	48.738	ENSRNOG00000057231	Ddx3	66	52.194
ENSRNOG00000026686	Ddx4	56	39.259	ENSRNOG00000030680	Ddx5	64	39.259
ENSRNOG00000026686	Ddx4	55	40.253	ENSRNOG00000050868	Ddx43	60	40.253
ENSRNOG00000026686	Ddx4	55	34.447	ENSRNOG00000007838	Ddx47	82	34.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000026686	Ddx4	99	89.459	ENSG00000152670	DDX4	97	89.459	Homo_sapiens
ENSRNOG00000026686	Ddx4	53	63.710	ENSAPOG00000021394	ddx4	93	64.247	Acanthochromis_polyacanthus
ENSRNOG00000026686	Ddx4	99	91.607	ENSAMEG00000013960	DDX4	96	91.892	Ailuropoda_melanoleuca
ENSRNOG00000026686	Ddx4	53	70.161	ENSACIG00000017623	ddx4	93	70.161	Amphilophus_citrinellus
ENSRNOG00000026686	Ddx4	53	70.161	ENSAPEG00000008490	ddx4	93	70.161	Amphiprion_percula
ENSRNOG00000026686	Ddx4	53	72.581	ENSATEG00000011704	ddx4	94	72.581	Anabas_testudineus
ENSRNOG00000026686	Ddx4	62	81.922	ENSAPLG00000011662	DDX4	98	81.922	Anas_platyrhynchos
ENSRNOG00000026686	Ddx4	99	64.681	ENSACAG00000014951	DDX4	96	63.329	Anolis_carolinensis
ENSRNOG00000026686	Ddx4	99	88.034	ENSANAG00000029060	DDX4	97	88.319	Aotus_nancymaae
ENSRNOG00000026686	Ddx4	66	68.511	ENSACLG00000007422	ddx4	79	66.667	Astatotilapia_calliptera
ENSRNOG00000026686	Ddx4	69	71.605	ENSAMXG00000010288	ddx4	80	67.917	Astyanax_mexicanus
ENSRNOG00000026686	Ddx4	99	90.469	ENSBTAG00000008871	DDX4	96	90.754	Bos_taurus
ENSRNOG00000026686	Ddx4	65	40.417	WBGene00001600	glh-3	67	40.417	Caenorhabditis_elegans
ENSRNOG00000026686	Ddx4	66	42.355	WBGene00001598	glh-1	61	43.070	Caenorhabditis_elegans
ENSRNOG00000026686	Ddx4	99	87.749	ENSCJAG00000001951	DDX4	97	88.034	Callithrix_jacchus
ENSRNOG00000026686	Ddx4	99	90.469	ENSCAFG00000006875	DDX4	96	90.896	Canis_familiaris
ENSRNOG00000026686	Ddx4	99	84.593	ENSCAFG00020024295	DDX4	96	84.593	Canis_lupus_dingo
ENSRNOG00000026686	Ddx4	99	90.896	ENSCHIG00000015567	DDX4	96	91.181	Capra_hircus
ENSRNOG00000026686	Ddx4	99	87.143	ENSTSYG00000011848	DDX4	97	87.143	Carlito_syrichta
ENSRNOG00000026686	Ddx4	99	70.085	ENSCPOG00000004327	DDX4	96	69.801	Cavia_porcellus
ENSRNOG00000026686	Ddx4	99	88.319	ENSCCAG00000028725	DDX4	97	88.746	Cebus_capucinus
ENSRNOG00000026686	Ddx4	99	90.171	ENSCATG00000044303	DDX4	97	90.171	Cercocebus_atys
ENSRNOG00000026686	Ddx4	99	88.478	ENSCLAG00000005386	DDX4	96	88.620	Chinchilla_lanigera
ENSRNOG00000026686	Ddx4	99	89.014	ENSCSAG00000016336	DDX4	96	89.014	Chlorocebus_sabaeus
ENSRNOG00000026686	Ddx4	99	78.205	ENSCHOG00000000200	DDX4	96	78.490	Choloepus_hoffmanni
ENSRNOG00000026686	Ddx4	70	84.940	ENSCPBG00000026547	DDX4	84	84.940	Chrysemys_picta_bellii
ENSRNOG00000026686	Ddx4	60	61.538	ENSCING00000001412	-	79	59.681	Ciona_intestinalis
ENSRNOG00000026686	Ddx4	64	61.283	ENSCSAVG00000004304	-	77	59.350	Ciona_savignyi
ENSRNOG00000026686	Ddx4	99	81.054	ENSCANG00000003129	DDX4	96	81.054	Colobus_angolensis_palliatus
ENSRNOG00000026686	Ddx4	99	97.009	ENSCGRG00001014961	Ddx4	96	97.009	Cricetulus_griseus_chok1gshd
ENSRNOG00000026686	Ddx4	99	97.009	ENSCGRG00000001251	Ddx4	96	97.009	Cricetulus_griseus_crigri
ENSRNOG00000026686	Ddx4	62	65.675	ENSCSEG00000006039	ddx4	73	60.516	Cynoglossus_semilaevis
ENSRNOG00000026686	Ddx4	69	71.399	ENSDARG00000014373	ddx4	76	68.587	Danio_rerio
ENSRNOG00000026686	Ddx4	93	86.527	ENSDNOG00000011658	DDX4	96	86.976	Dasypus_novemcinctus
ENSRNOG00000026686	Ddx4	99	88.669	ENSDORG00000012201	Ddx4	96	90.652	Dipodomys_ordii
ENSRNOG00000026686	Ddx4	60	55.035	FBgn0283442	vas	68	52.268	Drosophila_melanogaster
ENSRNOG00000026686	Ddx4	67	91.909	ENSETEG00000001835	DDX4	68	91.909	Echinops_telfairi
ENSRNOG00000026686	Ddx4	59	53.226	ENSEBUG00000003290	-	84	53.226	Eptatretus_burgeri
ENSRNOG00000026686	Ddx4	99	90.185	ENSEASG00005012143	DDX4	96	94.919	Equus_asinus_asinus
ENSRNOG00000026686	Ddx4	99	88.620	ENSECAG00000023616	DDX4	96	89.376	Equus_caballus
ENSRNOG00000026686	Ddx4	81	96.286	ENSEEUG00000012462	DDX4	81	96.286	Erinaceus_europaeus
ENSRNOG00000026686	Ddx4	99	91.026	ENSFCAG00000012560	DDX4	97	91.311	Felis_catus
ENSRNOG00000026686	Ddx4	63	77.753	ENSFALG00000010910	DDX4	66	72.470	Ficedula_albicollis
ENSRNOG00000026686	Ddx4	99	88.336	ENSFDAG00000003703	DDX4	96	88.336	Fukomys_damarensis
ENSRNOG00000026686	Ddx4	67	68.076	ENSFHEG00000019935	ddx4	84	62.942	Fundulus_heteroclitus
ENSRNOG00000026686	Ddx4	75	66.171	ENSGALG00000014713	DDX4	74	68.102	Gallus_gallus
ENSRNOG00000026686	Ddx4	66	69.181	ENSGAFG00000016509	ddx4	88	59.536	Gambusia_affinis
ENSRNOG00000026686	Ddx4	65	70.652	ENSGACG00000015323	ddx4	95	70.652	Gasterosteus_aculeatus
ENSRNOG00000026686	Ddx4	99	89.459	ENSGGOG00000002439	DDX4	97	89.459	Gorilla_gorilla
ENSRNOG00000026686	Ddx4	66	68.026	ENSHBUG00000001897	ddx4	77	68.913	Haplochromis_burtoni
ENSRNOG00000026686	Ddx4	99	80.797	ENSHGLG00000003594	DDX4	96	81.081	Heterocephalus_glaber_female
ENSRNOG00000026686	Ddx4	66	68.966	ENSHGLG00100001008	-	90	68.966	Heterocephalus_glaber_male
ENSRNOG00000026686	Ddx4	70	66.937	ENSHCOG00000018337	ddx4	82	66.937	Hippocampus_comes
ENSRNOG00000026686	Ddx4	69	70.165	ENSIPUG00000001845	ddx4	83	68.689	Ictalurus_punctatus
ENSRNOG00000026686	Ddx4	99	93.599	ENSSTOG00000021044	DDX4	96	93.883	Ictidomys_tridecemlineatus
ENSRNOG00000026686	Ddx4	99	90.409	ENSJJAG00000015867	Ddx4	97	90.691	Jaculus_jaculus
ENSRNOG00000026686	Ddx4	70	67.735	ENSKMAG00000012439	ddx4	80	65.966	Kryptolebias_marmoratus
ENSRNOG00000026686	Ddx4	65	69.935	ENSLBEG00000019504	ddx4	75	67.206	Labrus_bergylta
ENSRNOG00000026686	Ddx4	65	75.163	ENSLOCG00000010887	ddx4	95	75.163	Lepisosteus_oculatus
ENSRNOG00000026686	Ddx4	99	88.778	ENSLAFG00000005900	DDX4	96	89.062	Loxodonta_africana
ENSRNOG00000026686	Ddx4	99	90.028	ENSMFAG00000040186	DDX4	97	90.028	Macaca_fascicularis
ENSRNOG00000026686	Ddx4	99	90.028	ENSMMUG00000017386	DDX4	97	90.028	Macaca_mulatta
ENSRNOG00000026686	Ddx4	99	90.028	ENSMNEG00000033343	DDX4	97	90.028	Macaca_nemestrina
ENSRNOG00000026686	Ddx4	99	83.618	ENSMLEG00000038233	DDX4	100	83.618	Mandrillus_leucophaeus
ENSRNOG00000026686	Ddx4	53	70.699	ENSMAMG00000003574	ddx4	93	70.699	Mastacembelus_armatus
ENSRNOG00000026686	Ddx4	66	68.511	ENSMZEG00005019116	ddx4	79	69.348	Maylandia_zebra
ENSRNOG00000026686	Ddx4	99	81.624	ENSMAUG00000019873	Ddx4	96	81.054	Mesocricetus_auratus
ENSRNOG00000026686	Ddx4	99	91.026	ENSMICG00000008994	-	97	91.453	Microcebus_murinus
ENSRNOG00000026686	Ddx4	85	75.000	ENSMICG00000028132	-	91	75.622	Microcebus_murinus
ENSRNOG00000026686	Ddx4	99	96.006	ENSMOCG00000013250	Ddx4	96	96.006	Microtus_ochrogaster
ENSRNOG00000026686	Ddx4	69	63.241	ENSMMOG00000004689	ddx4	90	63.241	Mola_mola
ENSRNOG00000026686	Ddx4	99	83.784	ENSMODG00000019511	DDX4	96	83.784	Monodelphis_domestica
ENSRNOG00000026686	Ddx4	99	95.726	MGP_CAROLIEiJ_G0018893	Ddx4	96	95.726	Mus_caroli
ENSRNOG00000026686	Ddx4	99	96.154	ENSMUSG00000021758	Ddx4	96	96.154	Mus_musculus
ENSRNOG00000026686	Ddx4	99	96.576	MGP_PahariEiJ_G0015964	Ddx4	96	96.576	Mus_pahari
ENSRNOG00000026686	Ddx4	99	96.724	MGP_SPRETEiJ_G0019772	Ddx4	96	96.724	Mus_spretus
ENSRNOG00000026686	Ddx4	99	91.607	ENSMPUG00000007596	DDX4	96	91.892	Mustela_putorius_furo
ENSRNOG00000026686	Ddx4	99	83.286	ENSMLUG00000001189	DDX4	96	83.286	Myotis_lucifugus
ENSRNOG00000026686	Ddx4	99	91.465	ENSNGAG00000013259	Ddx4	96	91.892	Nannospalax_galili
ENSRNOG00000026686	Ddx4	65	66.307	ENSNBRG00000014442	ddx4	93	60.743	Neolamprologus_brichardi
ENSRNOG00000026686	Ddx4	99	86.752	ENSNLEG00000001662	DDX4	96	86.610	Nomascus_leucogenys
ENSRNOG00000026686	Ddx4	65	83.056	ENSMEUG00000007757	DDX4	81	68.462	Notamacropus_eugenii
ENSRNOG00000026686	Ddx4	77	66.849	ENSOPRG00000008071	DDX4	100	67.031	Ochotona_princeps
ENSRNOG00000026686	Ddx4	99	86.601	ENSODEG00000016951	-	97	86.742	Octodon_degus
ENSRNOG00000026686	Ddx4	99	80.339	ENSODEG00000003839	-	97	80.339	Octodon_degus
ENSRNOG00000026686	Ddx4	63	69.196	ENSONIG00000012063	ddx4	92	69.144	Oreochromis_niloticus
ENSRNOG00000026686	Ddx4	54	85.526	ENSOANG00000004888	-	96	85.526	Ornithorhynchus_anatinus
ENSRNOG00000026686	Ddx4	99	88.336	ENSOCUG00000008597	DDX4	96	88.478	Oryctolagus_cuniculus
ENSRNOG00000026686	Ddx4	69	68.228	ENSORLG00000020672	ddx4	82	65.709	Oryzias_latipes
ENSRNOG00000026686	Ddx4	66	70.213	ENSORLG00020014206	ddx4	86	65.193	Oryzias_latipes_hni
ENSRNOG00000026686	Ddx4	66	70.213	ENSORLG00015016600	ddx4	82	66.092	Oryzias_latipes_hsok
ENSRNOG00000026686	Ddx4	69	67.284	ENSOMEG00000010651	ddx4	83	65.748	Oryzias_melastigma
ENSRNOG00000026686	Ddx4	99	90.625	ENSOGAG00000007588	DDX4	97	91.051	Otolemur_garnettii
ENSRNOG00000026686	Ddx4	99	90.510	ENSOARG00000007644	DDX4	96	90.793	Ovis_aries
ENSRNOG00000026686	Ddx4	99	89.459	ENSPPAG00000033915	DDX4	97	89.459	Pan_paniscus
ENSRNOG00000026686	Ddx4	99	89.929	ENSPPRG00000011417	DDX4	97	90.780	Panthera_pardus
ENSRNOG00000026686	Ddx4	99	90.313	ENSPTIG00000007748	DDX4	97	90.598	Panthera_tigris_altaica
ENSRNOG00000026686	Ddx4	99	89.459	ENSPTRG00000016884	DDX4	97	89.459	Pan_troglodytes
ENSRNOG00000026686	Ddx4	99	89.886	ENSPANG00000010945	DDX4	97	89.886	Papio_anubis
ENSRNOG00000026686	Ddx4	87	75.121	ENSPSIG00000017179	DDX4	100	73.077	Pelodiscus_sinensis
ENSRNOG00000026686	Ddx4	53	63.003	ENSPMGG00000015642	ddx4	93	63.003	Periophthalmus_magnuspinnatus
ENSRNOG00000026686	Ddx4	99	96.148	ENSPEMG00000010086	Ddx4	96	96.148	Peromyscus_maniculatus_bairdii
ENSRNOG00000026686	Ddx4	91	84.389	ENSPCIG00000024758	DDX4	96	84.389	Phascolarctos_cinereus
ENSRNOG00000026686	Ddx4	65	69.546	ENSPFOG00000018842	ddx4	77	66.270	Poecilia_formosa
ENSRNOG00000026686	Ddx4	65	69.762	ENSPLAG00000020726	ddx4	77	66.468	Poecilia_latipinna
ENSRNOG00000026686	Ddx4	65	69.546	ENSPMEG00000002976	ddx4	80	66.270	Poecilia_mexicana
ENSRNOG00000026686	Ddx4	66	69.612	ENSPREG00000017840	ddx4	80	66.337	Poecilia_reticulata
ENSRNOG00000026686	Ddx4	99	89.886	ENSPPYG00000015472	DDX4	97	89.886	Pongo_abelii
ENSRNOG00000026686	Ddx4	99	76.956	ENSPCAG00000002675	DDX4	97	76.956	Procavia_capensis
ENSRNOG00000026686	Ddx4	95	90.118	ENSPVAG00000002448	DDX4	96	90.560	Pteropus_vampyrus
ENSRNOG00000026686	Ddx4	65	69.130	ENSPNYG00000022212	ddx4	79	69.130	Pundamilia_nyererei
ENSRNOG00000026686	Ddx4	61	73.380	ENSPNAG00000003686	ddx4	78	68.209	Pygocentrus_nattereri
ENSRNOG00000026686	Ddx4	99	89.744	ENSRBIG00000028795	DDX4	97	89.744	Rhinopithecus_bieti
ENSRNOG00000026686	Ddx4	99	89.601	ENSRROG00000045392	DDX4	97	89.601	Rhinopithecus_roxellana
ENSRNOG00000026686	Ddx4	72	45.124	YPL119C	DBP1	84	45.229	Saccharomyces_cerevisiae
ENSRNOG00000026686	Ddx4	99	88.319	ENSSBOG00000035231	DDX4	97	88.604	Saimiri_boliviensis_boliviensis
ENSRNOG00000026686	Ddx4	99	83.404	ENSSHAG00000009132	DDX4	96	83.404	Sarcophilus_harrisii
ENSRNOG00000026686	Ddx4	65	75.217	ENSSFOG00015006531	ddx4	82	68.797	Scleropages_formosus
ENSRNOG00000026686	Ddx4	69	66.186	ENSSMAG00000009800	ddx4	83	62.825	Scophthalmus_maximus
ENSRNOG00000026686	Ddx4	65	70.806	ENSSDUG00000022015	ddx4	77	67.748	Seriola_dumerili
ENSRNOG00000026686	Ddx4	53	71.774	ENSSLDG00000015312	ddx4	93	71.774	Seriola_lalandi_dorsalis
ENSRNOG00000026686	Ddx4	99	77.383	ENSSARG00000004206	DDX4	97	78.693	Sorex_araneus
ENSRNOG00000026686	Ddx4	65	86.304	ENSSPUG00000007260	DDX4	79	86.304	Sphenodon_punctatus
ENSRNOG00000026686	Ddx4	53	69.086	ENSSPAG00000014307	ddx4	93	69.086	Stegastes_partitus
ENSRNOG00000026686	Ddx4	99	90.754	ENSSSCG00000016913	DDX4	96	91.038	Sus_scrofa
ENSRNOG00000026686	Ddx4	62	76.712	ENSTGUG00000002548	DDX4	100	76.712	Taeniopygia_guttata
ENSRNOG00000026686	Ddx4	69	60.204	ENSTNIG00000014474	ddx4	89	59.804	Tetraodon_nigroviridis
ENSRNOG00000026686	Ddx4	86	73.034	ENSTBEG00000003569	DDX4	83	73.034	Tupaia_belangeri
ENSRNOG00000026686	Ddx4	99	84.900	ENSTTRG00000009316	DDX4	97	84.330	Tursiops_truncatus
ENSRNOG00000026686	Ddx4	99	85.328	ENSUAMG00000023028	DDX4	96	85.328	Ursus_americanus
ENSRNOG00000026686	Ddx4	99	85.328	ENSUMAG00000009291	DDX4	96	85.328	Ursus_maritimus
ENSRNOG00000026686	Ddx4	98	88.617	ENSVPAG00000009491	DDX4	96	89.625	Vicugna_pacos
ENSRNOG00000026686	Ddx4	99	90.896	ENSVVUG00000021369	DDX4	96	91.323	Vulpes_vulpes
ENSRNOG00000026686	Ddx4	77	65.209	ENSXETG00000030832	DDX4	86	60.833	Xenopus_tropicalis
ENSRNOG00000026686	Ddx4	66	70.043	ENSXMAG00000009677	ddx4	82	66.931	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0007140	male meiotic nuclear division	-	ISO	Process
GO:0007140	male meiotic nuclear division	-	ISS	Process
GO:0007141	male meiosis I	-	ISO	Process
GO:0007141	male meiosis I	-	ISS	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007283	spermatogenesis	24141902.	IEP	Process
GO:0007283	spermatogenesis	-	ISO	Process
GO:0007283	spermatogenesis	-	ISS	Process
GO:0010529	negative regulation of transposition	-	ISO	Process
GO:0010529	negative regulation of transposition	-	ISS	Process
GO:0016887	ATPase activity	-	ISO	Function
GO:0016887	ATPase activity	-	ISS	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0030317	flagellated sperm motility	-	IEA	Process
GO:0030317	flagellated sperm motility	-	ISO	Process
GO:0031047	gene silencing by RNA	-	IEA	Process
GO:0032880	regulation of protein localization	-	ISO	Process
GO:0033391	chromatoid body	24141902.	IDA	Component
GO:0033391	chromatoid body	-	ISO	Component
GO:0034587	piRNA metabolic process	-	ISO	Process
GO:0034587	piRNA metabolic process	-	ISS	Process
GO:0043046	DNA methylation involved in gamete generation	-	ISO	Process
GO:0043046	DNA methylation involved in gamete generation	-	ISS	Process
GO:0048471	perinuclear region of cytoplasm	24141902.	IDA	Component
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0071546	pi-body	-	ISO	Component
GO:0071546	pi-body	-	ISS	Component
GO:0071547	piP-body	-	ISO	Component
GO:0071547	piP-body	-	ISS	Component
GO:1990511	piRNA biosynthetic process	-	ISO	Process
GO:1990511	piRNA biosynthetic process	-	ISS	Process
GO:1990904	ribonucleoprotein complex	-	ISO	Component