EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000026853 (Gene tree)
Gene ID: 292087
Gene Symbol: Urb2
Alias: LOC292087|RGD1307980
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 23579 bases
Position: chr19:56803382-56826960
Accession: 1307980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000029895	Urb2	PF10441.9	7.6e-24	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000036042	-	6075	-	ENSRNOP00000029895	1569 (aa)	-	D4AAN0

Gene Model

Click here to download ENSRNOG00000026853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000026853's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000026853	Urb2	97	72.858	ENSG00000135763	URB2	100	82.143	Homo_sapiens
ENSRNOG00000026853	Urb2	87	35.464	ENSAPOG00000000608	urb2	95	35.601	Acanthochromis_polyacanthus
ENSRNOG00000026853	Urb2	97	70.970	ENSAMEG00000009206	URB2	99	70.970	Ailuropoda_melanoleuca
ENSRNOG00000026853	Urb2	97	53.704	ENSAOCG00000019961	urb2	97	53.704	Amphiprion_ocellaris
ENSRNOG00000026853	Urb2	97	53.704	ENSAPEG00000005263	urb2	97	53.704	Amphiprion_percula
ENSRNOG00000026853	Urb2	97	34.651	ENSATEG00000020930	urb2	99	34.264	Anabas_testudineus
ENSRNOG00000026853	Urb2	95	46.892	ENSAPLG00000002998	URB2	100	47.024	Anas_platyrhynchos
ENSRNOG00000026853	Urb2	97	46.964	ENSACAG00000001285	URB2	100	46.964	Anolis_carolinensis
ENSRNOG00000026853	Urb2	97	72.876	ENSANAG00000033963	URB2	100	72.810	Aotus_nancymaae
ENSRNOG00000026853	Urb2	87	34.457	ENSACLG00000009254	urb2	95	34.345	Astatotilapia_calliptera
ENSRNOG00000026853	Urb2	97	35.677	ENSAMXG00000003474	urb2	100	35.677	Astyanax_mexicanus
ENSRNOG00000026853	Urb2	97	65.118	ENSBTAG00000010180	URB2	99	65.118	Bos_taurus
ENSRNOG00000026853	Urb2	92	82.979	ENSCJAG00000010968	URB2	100	72.418	Callithrix_jacchus
ENSRNOG00000026853	Urb2	97	70.923	ENSCAFG00000012118	URB2	100	70.923	Canis_familiaris
ENSRNOG00000026853	Urb2	91	69.446	ENSCAFG00020027217	URB2	99	69.446	Canis_lupus_dingo
ENSRNOG00000026853	Urb2	97	65.314	ENSCHIG00000014513	URB2	99	65.314	Capra_hircus
ENSRNOG00000026853	Urb2	97	71.335	ENSTSYG00000006924	URB2	99	71.335	Carlito_syrichta
ENSRNOG00000026853	Urb2	62	80.864	ENSCPOG00000020777	-	100	77.874	Cavia_porcellus
ENSRNOG00000026853	Urb2	97	72.923	ENSCCAG00000023932	URB2	100	72.858	Cebus_capucinus
ENSRNOG00000026853	Urb2	97	72.793	ENSCATG00000043366	URB2	100	72.793	Cercocebus_atys
ENSRNOG00000026853	Urb2	97	72.954	ENSCLAG00000006268	URB2	100	72.954	Chinchilla_lanigera
ENSRNOG00000026853	Urb2	97	72.858	ENSCSAG00000010599	URB2	100	72.858	Chlorocebus_sabaeus
ENSRNOG00000026853	Urb2	67	72.480	ENSCHOG00000010163	URB2	70	72.480	Choloepus_hoffmanni
ENSRNOG00000026853	Urb2	97	51.184	ENSCPBG00000006191	URB2	100	51.184	Chrysemys_picta_bellii
ENSRNOG00000026853	Urb2	97	72.923	ENSCANG00000023711	URB2	100	72.923	Colobus_angolensis_palliatus
ENSRNOG00000026853	Urb2	97	89.115	ENSCGRG00001009591	Urb2	100	89.115	Cricetulus_griseus_chok1gshd
ENSRNOG00000026853	Urb2	97	89.115	ENSCGRG00000011259	Urb2	100	89.115	Cricetulus_griseus_crigri
ENSRNOG00000026853	Urb2	97	33.692	ENSCSEG00000000299	urb2	99	33.673	Cynoglossus_semilaevis
ENSRNOG00000026853	Urb2	97	33.836	ENSCVAG00000011011	urb2	99	33.856	Cyprinodon_variegatus
ENSRNOG00000026853	Urb2	97	37.032	ENSDARG00000003217	urb2	99	59.223	Danio_rerio
ENSRNOG00000026853	Urb2	94	56.498	ENSDNOG00000043064	URB2	99	56.604	Dasypus_novemcinctus
ENSRNOG00000026853	Urb2	97	73.953	ENSDORG00000014975	Urb2	100	73.953	Dipodomys_ordii
ENSRNOG00000026853	Urb2	92	65.625	ENSETEG00000002869	URB2	95	65.625	Echinops_telfairi
ENSRNOG00000026853	Urb2	97	71.139	ENSEASG00005012060	URB2	99	71.139	Equus_asinus_asinus
ENSRNOG00000026853	Urb2	90	80.142	ENSECAG00000012338	URB2	99	80.142	Equus_caballus
ENSRNOG00000026853	Urb2	90	78.014	ENSEEUG00000002669	URB2	92	78.014	Erinaceus_europaeus
ENSRNOG00000026853	Urb2	97	38.739	ENSELUG00000014647	urb2	99	38.803	Esox_lucius
ENSRNOG00000026853	Urb2	97	70.288	ENSFCAG00000007662	URB2	100	70.288	Felis_catus
ENSRNOG00000026853	Urb2	97	46.825	ENSFALG00000003385	URB2	100	46.825	Ficedula_albicollis
ENSRNOG00000026853	Urb2	97	73.054	ENSFDAG00000021079	URB2	100	73.054	Fukomys_damarensis
ENSRNOG00000026853	Urb2	97	34.529	ENSFHEG00000010357	urb2	99	34.449	Fundulus_heteroclitus
ENSRNOG00000026853	Urb2	89	38.246	ENSGMOG00000012459	urb2	100	34.569	Gadus_morhua
ENSRNOG00000026853	Urb2	97	48.141	ENSGALG00000011101	URB2	100	48.141	Gallus_gallus
ENSRNOG00000026853	Urb2	97	36.694	ENSGACG00000016179	urb2	99	36.584	Gasterosteus_aculeatus
ENSRNOG00000026853	Urb2	97	51.377	ENSGAGG00000021879	URB2	100	51.377	Gopherus_agassizii
ENSRNOG00000026853	Urb2	97	72.662	ENSGGOG00000025643	URB2	100	72.662	Gorilla_gorilla
ENSRNOG00000026853	Urb2	97	53.086	ENSHBUG00000018469	urb2	97	53.086	Haplochromis_burtoni
ENSRNOG00000026853	Urb2	95	74.580	ENSHGLG00000016561	URB2	99	74.580	Heterocephalus_glaber_female
ENSRNOG00000026853	Urb2	97	72.495	ENSHGLG00100001838	URB2	100	72.495	Heterocephalus_glaber_male
ENSRNOG00000026853	Urb2	97	35.600	ENSIPUG00000020315	urb2	99	35.604	Ictalurus_punctatus
ENSRNOG00000026853	Urb2	97	72.775	ENSSTOG00000025323	URB2	100	72.775	Ictidomys_tridecemlineatus
ENSRNOG00000026853	Urb2	97	76.787	ENSJJAG00000011998	Urb2	100	76.721	Jaculus_jaculus
ENSRNOG00000026853	Urb2	97	33.493	ENSKMAG00000020129	urb2	99	33.513	Kryptolebias_marmoratus
ENSRNOG00000026853	Urb2	97	44.402	ENSLACG00000002038	URB2	100	44.865	Latimeria_chalumnae
ENSRNOG00000026853	Urb2	97	39.820	ENSLOCG00000015462	urb2	100	39.884	Lepisosteus_oculatus
ENSRNOG00000026853	Urb2	97	69.568	ENSLAFG00000012484	URB2	100	69.568	Loxodonta_africana
ENSRNOG00000026853	Urb2	97	72.531	ENSMFAG00000039905	URB2	100	72.531	Macaca_fascicularis
ENSRNOG00000026853	Urb2	97	72.662	ENSMMUG00000009509	URB2	100	72.662	Macaca_mulatta
ENSRNOG00000026853	Urb2	97	72.989	ENSMNEG00000038762	URB2	100	72.989	Macaca_nemestrina
ENSRNOG00000026853	Urb2	97	72.662	ENSMLEG00000043252	URB2	100	72.662	Mandrillus_leucophaeus
ENSRNOG00000026853	Urb2	97	34.304	ENSMAMG00000020365	urb2	99	34.015	Mastacembelus_armatus
ENSRNOG00000026853	Urb2	97	53.086	ENSMZEG00005011027	urb2	97	53.086	Maylandia_zebra
ENSRNOG00000026853	Urb2	92	45.207	ENSMGAG00000012073	URB2	100	45.207	Meleagris_gallopavo
ENSRNOG00000026853	Urb2	92	92.199	ENSMAUG00000017980	Urb2	100	88.650	Mesocricetus_auratus
ENSRNOG00000026853	Urb2	97	72.709	ENSMICG00000033302	URB2	99	72.709	Microcebus_murinus
ENSRNOG00000026853	Urb2	97	86.754	ENSMOCG00000020369	Urb2	100	86.754	Microtus_ochrogaster
ENSRNOG00000026853	Urb2	97	35.660	ENSMALG00000006529	urb2	99	35.284	Monopterus_albus
ENSRNOG00000026853	Urb2	97	90.623	ENSMUSG00000031976	Urb2	100	90.623	Mus_musculus
ENSRNOG00000026853	Urb2	97	69.221	ENSMPUG00000012438	URB2	100	69.155	Mustela_putorius_furo
ENSRNOG00000026853	Urb2	97	78.951	ENSNGAG00000016524	Urb2	100	78.951	Nannospalax_galili
ENSRNOG00000026853	Urb2	97	73.137	ENSNLEG00000014450	URB2	100	73.137	Nomascus_leucogenys
ENSRNOG00000026853	Urb2	89	56.936	ENSMEUG00000016434	URB2	94	57.021	Notamacropus_eugenii
ENSRNOG00000026853	Urb2	89	67.395	ENSOPRG00000009906	URB2	92	67.395	Ochotona_princeps
ENSRNOG00000026853	Urb2	97	73.037	ENSODEG00000005593	URB2	100	73.037	Octodon_degus
ENSRNOG00000026853	Urb2	97	37.524	ENSONIG00000017078	urb2	99	37.325	Oreochromis_niloticus
ENSRNOG00000026853	Urb2	97	47.529	ENSOANG00000013732	URB2	100	47.984	Ornithorhynchus_anatinus
ENSRNOG00000026853	Urb2	97	70.858	ENSOCUG00000010700	URB2	99	70.858	Oryctolagus_cuniculus
ENSRNOG00000026853	Urb2	97	34.493	ENSORLG00000010915	urb2	99	34.334	Oryzias_latipes
ENSRNOG00000026853	Urb2	97	34.712	ENSORLG00020003361	urb2	99	34.537	Oryzias_latipes_hni
ENSRNOG00000026853	Urb2	97	34.369	ENSORLG00015001534	urb2	99	34.489	Oryzias_latipes_hsok
ENSRNOG00000026853	Urb2	97	34.632	ENSOMEG00000010076	urb2	99	34.632	Oryzias_melastigma
ENSRNOG00000026853	Urb2	97	70.569	ENSOGAG00000003021	URB2	99	70.569	Otolemur_garnettii
ENSRNOG00000026853	Urb2	97	65.052	ENSOARG00000003102	URB2	99	65.052	Ovis_aries
ENSRNOG00000026853	Urb2	97	73.185	ENSPPAG00000040629	URB2	100	73.185	Pan_paniscus
ENSRNOG00000026853	Urb2	97	69.830	ENSPPRG00000012767	URB2	100	69.830	Panthera_pardus
ENSRNOG00000026853	Urb2	94	90.909	ENSPTIG00000012577	URB2	100	90.909	Panthera_tigris_altaica
ENSRNOG00000026853	Urb2	97	72.989	ENSPTRG00000002092	URB2	100	72.989	Pan_troglodytes
ENSRNOG00000026853	Urb2	97	71.027	ENSPANG00000002245	URB2	100	71.027	Papio_anubis
ENSRNOG00000026853	Urb2	97	38.520	ENSPKIG00000005787	urb2	100	38.584	Paramormyrops_kingsleyae
ENSRNOG00000026853	Urb2	97	50.447	ENSPSIG00000002690	URB2	100	50.447	Pelodiscus_sinensis
ENSRNOG00000026853	Urb2	93	89.589	ENSPEMG00000019551	Urb2	100	89.589	Peromyscus_maniculatus_bairdii
ENSRNOG00000026853	Urb2	97	58.382	ENSPCIG00000030071	URB2	100	58.382	Phascolarctos_cinereus
ENSRNOG00000026853	Urb2	97	34.741	ENSPFOG00000014330	urb2	99	35.102	Poecilia_formosa
ENSRNOG00000026853	Urb2	97	34.310	ENSPLAG00000014654	urb2	99	34.777	Poecilia_latipinna
ENSRNOG00000026853	Urb2	97	33.824	ENSPMEG00000012356	urb2	99	34.286	Poecilia_mexicana
ENSRNOG00000026853	Urb2	97	34.732	ENSPREG00000010268	urb2	99	34.447	Poecilia_reticulata
ENSRNOG00000026853	Urb2	97	72.775	ENSPPYG00000000123	URB2	99	72.775	Pongo_abelii
ENSRNOG00000026853	Urb2	97	72.579	ENSPCOG00000023537	URB2	99	72.579	Propithecus_coquereli
ENSRNOG00000026853	Urb2	97	59.504	ENSPVAG00000002108	URB2	100	59.765	Pteropus_vampyrus
ENSRNOG00000026853	Urb2	87	34.571	ENSPNYG00000016840	urb2	95	34.459	Pundamilia_nyererei
ENSRNOG00000026853	Urb2	97	35.997	ENSPNAG00000013684	urb2	100	35.962	Pygocentrus_nattereri
ENSRNOG00000026853	Urb2	97	73.054	ENSRBIG00000037937	URB2	100	73.054	Rhinopithecus_bieti
ENSRNOG00000026853	Urb2	97	72.858	ENSRROG00000039854	URB2	100	72.858	Rhinopithecus_roxellana
ENSRNOG00000026853	Urb2	97	73.316	ENSSBOG00000023055	URB2	100	73.250	Saimiri_boliviensis_boliviensis
ENSRNOG00000026853	Urb2	97	58.382	ENSSHAG00000014735	URB2	100	58.317	Sarcophilus_harrisii
ENSRNOG00000026853	Urb2	95	38.139	ENSSFOG00015015432	urb2	98	38.052	Scleropages_formosus
ENSRNOG00000026853	Urb2	87	34.024	ENSSMAG00000004984	urb2	95	33.912	Scophthalmus_maximus
ENSRNOG00000026853	Urb2	97	34.901	ENSSDUG00000000902	urb2	99	34.884	Seriola_dumerili
ENSRNOG00000026853	Urb2	97	50.223	ENSSPUG00000018549	URB2	100	50.319	Sphenodon_punctatus
ENSRNOG00000026853	Urb2	97	36.168	ENSSPAG00000013632	urb2	99	36.287	Stegastes_partitus
ENSRNOG00000026853	Urb2	97	67.168	ENSSSCG00000010186	URB2	99	67.168	Sus_scrofa
ENSRNOG00000026853	Urb2	97	47.665	ENSTGUG00000009990	URB2	100	47.665	Taeniopygia_guttata
ENSRNOG00000026853	Urb2	97	33.730	ENSTRUG00000008173	urb2	99	33.769	Takifugu_rubripes
ENSRNOG00000026853	Urb2	97	35.769	ENSTNIG00000017689	urb2	96	45.623	Tetraodon_nigroviridis
ENSRNOG00000026853	Urb2	97	59.869	ENSTTRG00000014864	URB2	99	59.869	Tursiops_truncatus
ENSRNOG00000026853	Urb2	97	70.773	ENSUAMG00000015022	URB2	99	70.773	Ursus_americanus
ENSRNOG00000026853	Urb2	97	71.101	ENSUMAG00000004728	URB2	99	71.101	Ursus_maritimus
ENSRNOG00000026853	Urb2	61	82.143	ENSVPAG00000001750	-	63	82.143	Vicugna_pacos
ENSRNOG00000026853	Urb2	97	70.596	ENSVVUG00000006747	URB2	100	70.596	Vulpes_vulpes
ENSRNOG00000026853	Urb2	97	40.207	ENSXETG00000023331	urb2	100	40.207	Xenopus_tropicalis
ENSRNOG00000026853	Urb2	97	34.476	ENSXMAG00000015059	urb2	99	34.331	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016235	aggresome	-	IEA	Component
GO:0016235	aggresome	-	ISO	Component
GO:0030496	midbody	-	IEA	Component
GO:0030496	midbody	-	ISO	Component
GO:0042254	ribosome biogenesis	21873635.	IBA	Process