EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000027015 (Gene tree)
Gene ID
296467
Gene Symbol
Ythdf1
Alias
LOC296467
Full Name
YTH N(6)-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
15510 bases
Position
chr3:176415914-176431423
Accession
1308932
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000037700YTHPF04146.151.6e-4111
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000037271-3079-ENSRNOP00000037700559 (aa)-Q4V8J6
Gene Model
Click here to download ENSRNOG00000027015's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000027015's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000027015Ythdf19463.036ENSRNOG00000010892Ythdf29461.837
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000027015Ythdf110093.739ENSG00000149658YTHDF110093.739Homo_sapiens
ENSRNOG00000027015Ythdf110075.172ENSAPOG00000010796YTHDF110073.621Acanthochromis_polyacanthus
ENSRNOG00000027015Ythdf19673.084ENSAPOG00000004358ythdf19772.872Acanthochromis_polyacanthus
ENSRNOG00000027015Ythdf19992.559ENSAMEG00000017323YTHDF19892.559Ailuropoda_melanoleuca
ENSRNOG00000027015Ythdf110074.826ENSACIG00000020083YTHDF110073.459Amphilophus_citrinellus
ENSRNOG00000027015Ythdf19670.567ENSACIG00000011264ythdf19770.753Amphilophus_citrinellus
ENSRNOG00000027015Ythdf19970.744ENSAOCG00000022251ythdf19873.036Amphiprion_ocellaris
ENSRNOG00000027015Ythdf110073.868ENSAOCG00000012567YTHDF110073.402Amphiprion_ocellaris
ENSRNOG00000027015Ythdf19670.508ENSAPEG00000021878ythdf19570.101Amphiprion_percula
ENSRNOG00000027015Ythdf110074.042ENSAPEG00000008750YTHDF110073.575Amphiprion_percula
ENSRNOG00000027015Ythdf110073.519ENSATEG00000005996YTHDF110073.242Anabas_testudineus
ENSRNOG00000027015Ythdf19671.892ENSATEG00000023840ythdf19871.930Anabas_testudineus
ENSRNOG00000027015Ythdf19989.048ENSAPLG00000005985YTHDF19989.946Anas_platyrhynchos
ENSRNOG00000027015Ythdf110086.250ENSACAG00000005560YTHDF110086.250Anolis_carolinensis
ENSRNOG00000027015Ythdf110079.249ENSANAG00000021022-10079.249Aotus_nancymaae
ENSRNOG00000027015Ythdf110093.381ENSANAG00000034786-10093.910Aotus_nancymaae
ENSRNOG00000027015Ythdf110074.216ENSACLG00000025518YTHDF110073.748Astatotilapia_calliptera
ENSRNOG00000027015Ythdf110088.372ENSBTAG00000010383YTHDF110088.372Bos_taurus
ENSRNOG00000027015Ythdf110093.023ENSCJAG00000010056YTHDF110093.023Callithrix_jacchus
ENSRNOG00000027015Ythdf19192.913ENSCAFG00000012772YTHDF19992.913Canis_familiaris
ENSRNOG00000027015Ythdf19192.913ENSCAFG00020001214YTHDF19992.913Canis_lupus_dingo
ENSRNOG00000027015Ythdf110087.835ENSCHIG00000026494YTHDF110087.835Capra_hircus
ENSRNOG00000027015Ythdf19992.998ENSTSYG00000033436YTHDF19992.998Carlito_syrichta
ENSRNOG00000027015Ythdf19791.513ENSCAPG00000002544YTHDF19491.176Cavia_aperea
ENSRNOG00000027015Ythdf110093.381ENSCPOG00000010202YTHDF110093.381Cavia_porcellus
ENSRNOG00000027015Ythdf110093.202ENSCCAG00000024650YTHDF110093.202Cebus_capucinus
ENSRNOG00000027015Ythdf110093.739ENSCATG00000033272YTHDF110093.739Cercocebus_atys
ENSRNOG00000027015Ythdf110093.929ENSCLAG00000005989YTHDF110093.929Chinchilla_lanigera
ENSRNOG00000027015Ythdf110093.918ENSCSAG00000016266YTHDF110093.918Chlorocebus_sabaeus
ENSRNOG00000027015Ythdf110090.000ENSCPBG00000027183YTHDF110090.000Chrysemys_picta_bellii
ENSRNOG00000027015Ythdf19993.829ENSCANG00000029082YTHDF19893.829Colobus_angolensis_palliatus
ENSRNOG00000027015Ythdf110098.569ENSCGRG00001016568Ythdf110098.569Cricetulus_griseus_chok1gshd
ENSRNOG00000027015Ythdf19898.545ENSCGRG00000009207Ythdf110098.545Cricetulus_griseus_crigri
ENSRNOG00000027015Ythdf19673.175ENSCSEG00000020623YTHDF19873.188Cynoglossus_semilaevis
ENSRNOG00000027015Ythdf19970.671ENSCVAG00000017940ythdf19771.071Cyprinodon_variegatus
ENSRNOG00000027015Ythdf110071.197ENSCVAG00000014378YTHDF19974.552Cyprinodon_variegatus
ENSRNOG00000027015Ythdf110070.847ENSDARG00000016447ythdf19572.696Danio_rerio
ENSRNOG00000027015Ythdf110090.340ENSDNOG00000043590YTHDF110090.340Dasypus_novemcinctus
ENSRNOG00000027015Ythdf19792.435ENSDORG00000002879Ythdf19492.435Dipodomys_ordii
ENSRNOG00000027015Ythdf17964.744ENSETEG00000017860-9864.744Echinops_telfairi
ENSRNOG00000027015Ythdf110094.275ENSEASG00005023186YTHDF110094.275Equus_asinus_asinus
ENSRNOG00000027015Ythdf19894.000ENSECAG00000019475YTHDF110094.106Equus_caballus
ENSRNOG00000027015Ythdf19290.680ENSEEUG00000007461YTHDF110090.680Erinaceus_europaeus
ENSRNOG00000027015Ythdf19474.444ENSELUG00000001906YTHDF19972.152Esox_lucius
ENSRNOG00000027015Ythdf19971.647ENSELUG00000022768ythdf19973.514Esox_lucius
ENSRNOG00000027015Ythdf110092.308ENSFCAG00000008917YTHDF110092.308Felis_catus
ENSRNOG00000027015Ythdf110090.000ENSFALG00000010463YTHDF110090.000Ficedula_albicollis
ENSRNOG00000027015Ythdf110093.202ENSFDAG00000019602YTHDF110093.202Fukomys_damarensis
ENSRNOG00000027015Ythdf19775.179ENSFHEG00000002540YTHDF19974.113Fundulus_heteroclitus
ENSRNOG00000027015Ythdf19972.163ENSFHEG00000023218ythdf19870.870Fundulus_heteroclitus
ENSRNOG00000027015Ythdf18688.832ENSGMOG00000019610ythdf19569.468Gadus_morhua
ENSRNOG00000027015Ythdf110089.483ENSGALG00000005745YTHDF110090.607Gallus_gallus
ENSRNOG00000027015Ythdf110072.607ENSGAFG00000021100YTHDF19974.552Gambusia_affinis
ENSRNOG00000027015Ythdf110074.155ENSGACG00000002613YTHDF110072.466Gasterosteus_aculeatus
ENSRNOG00000027015Ythdf19671.930ENSGACG00000012014ythdf19571.181Gasterosteus_aculeatus
ENSRNOG00000027015Ythdf110090.000ENSGAGG00000003007YTHDF110090.000Gopherus_agassizii
ENSRNOG00000027015Ythdf110093.918ENSGGOG00000008340YTHDF110093.918Gorilla_gorilla
ENSRNOG00000027015Ythdf19671.880ENSHBUG00000011284ythdf19872.426Haplochromis_burtoni
ENSRNOG00000027015Ythdf110074.042ENSHBUG00000004875YTHDF110073.575Haplochromis_burtoni
ENSRNOG00000027015Ythdf110093.739ENSHGLG00000006585YTHDF110093.739Heterocephalus_glaber_female
ENSRNOG00000027015Ythdf110093.739ENSHGLG00100004683YTHDF110093.739Heterocephalus_glaber_male
ENSRNOG00000027015Ythdf110070.275ENSHCOG00000011303YTHDF110073.849Hippocampus_comes
ENSRNOG00000027015Ythdf19971.119ENSHCOG00000008866ythdf19871.259Hippocampus_comes
ENSRNOG00000027015Ythdf19776.727ENSIPUG00000000425Ythdf19875.671Ictalurus_punctatus
ENSRNOG00000027015Ythdf19993.829ENSSTOG00000023001YTHDF19993.829Ictidomys_tridecemlineatus
ENSRNOG00000027015Ythdf19896.364ENSJJAG00000013589Ythdf110096.364Jaculus_jaculus
ENSRNOG00000027015Ythdf19670.841ENSKMAG00000005595ythdf19871.454Kryptolebias_marmoratus
ENSRNOG00000027015Ythdf19773.936ENSKMAG00000017472YTHDF19974.153Kryptolebias_marmoratus
ENSRNOG00000027015Ythdf19672.482ENSLBEG00000014105ythdf19570.648Labrus_bergylta
ENSRNOG00000027015Ythdf110074.699ENSLBEG00000012068YTHDF110074.699Labrus_bergylta
ENSRNOG00000027015Ythdf19682.353ENSLACG00000014195YTHDF19684.831Latimeria_chalumnae
ENSRNOG00000027015Ythdf110077.241ENSLOCG00000005020ythdf19578.324Lepisosteus_oculatus
ENSRNOG00000027015Ythdf110091.413ENSLAFG00000008884YTHDF110091.413Loxodonta_africana
ENSRNOG00000027015Ythdf110093.918ENSMFAG00000042868YTHDF110093.918Macaca_fascicularis
ENSRNOG00000027015Ythdf110093.918ENSMMUG00000009227YTHDF110093.918Macaca_mulatta
ENSRNOG00000027015Ythdf110093.918ENSMNEG00000030851YTHDF110093.918Macaca_nemestrina
ENSRNOG00000027015Ythdf19894.000ENSMLEG00000009252YTHDF110094.000Mandrillus_leucophaeus
ENSRNOG00000027015Ythdf19671.712ENSMAMG00000024255ythdf19972.822Mastacembelus_armatus
ENSRNOG00000027015Ythdf110075.217ENSMAMG00000011072YTHDF110074.182Mastacembelus_armatus
ENSRNOG00000027015Ythdf19673.036ENSMZEG00005026397ythdf19873.582Maylandia_zebra
ENSRNOG00000027015Ythdf110074.042ENSMZEG00005023596YTHDF110073.575Maylandia_zebra
ENSRNOG00000027015Ythdf19988.551ENSMGAG00000006139YTHDF19989.445Meleagris_gallopavo
ENSRNOG00000027015Ythdf110098.569ENSMAUG00000017660Ythdf110098.569Mesocricetus_auratus
ENSRNOG00000027015Ythdf110093.560ENSMICG00000032266YTHDF110093.560Microcebus_murinus
ENSRNOG00000027015Ythdf110098.211ENSMOCG00000013573Ythdf110098.211Microtus_ochrogaster
ENSRNOG00000027015Ythdf19971.334ENSMMOG00000020467YTHDF19471.380Mola_mola
ENSRNOG00000027015Ythdf19190.607ENSMODG00000016842YTHDF110090.607Monodelphis_domestica
ENSRNOG00000027015Ythdf19671.556ENSMALG00000015672ythdf19671.277Monopterus_albus
ENSRNOG00000027015Ythdf110074.439ENSMALG00000022209YTHDF110074.523Monopterus_albus
ENSRNOG00000027015Ythdf110099.284MGP_CAROLIEiJ_G0024790Ythdf110099.284Mus_caroli
ENSRNOG00000027015Ythdf110099.284ENSMUSG00000038848Ythdf110099.284Mus_musculus
ENSRNOG00000027015Ythdf110098.927MGP_PahariEiJ_G0026237Ythdf110098.927Mus_pahari
ENSRNOG00000027015Ythdf110099.284MGP_SPRETEiJ_G0025715Ythdf110099.284Mus_spretus
ENSRNOG00000027015Ythdf19187.623ENSMPUG00000008111YTHDF110088.802Mustela_putorius_furo
ENSRNOG00000027015Ythdf19791.697ENSMLUG00000002241YTHDF19691.697Myotis_lucifugus
ENSRNOG00000027015Ythdf110097.317ENSNGAG00000000334Ythdf110097.317Nannospalax_galili
ENSRNOG00000027015Ythdf19970.619ENSNBRG00000008213ythdf19672.340Neolamprologus_brichardi
ENSRNOG00000027015Ythdf110074.042ENSNBRG00000015321YTHDF110073.575Neolamprologus_brichardi
ENSRNOG00000027015Ythdf19579.849ENSOPRG00000001758-9879.924Ochotona_princeps
ENSRNOG00000027015Ythdf110093.393ENSODEG00000004380-10093.393Octodon_degus
ENSRNOG00000027015Ythdf110075.177ENSODEG00000000074-10078.014Octodon_degus
ENSRNOG00000027015Ythdf19671.181ENSONIG00000016799ythdf19771.084Oreochromis_niloticus
ENSRNOG00000027015Ythdf110090.018ENSOANG00000003723YTHDF110090.553Ornithorhynchus_anatinus
ENSRNOG00000027015Ythdf110081.139ENSOCUG00000012780YTHDF110080.961Oryctolagus_cuniculus
ENSRNOG00000027015Ythdf19669.948ENSORLG00000014665YTHDF19569.915Oryzias_latipes
ENSRNOG00000027015Ythdf19774.147ENSORLG00000009739YTHDF19974.731Oryzias_latipes
ENSRNOG00000027015Ythdf19670.415ENSORLG00020000307ythdf19570.377Oryzias_latipes_hni
ENSRNOG00000027015Ythdf19775.091ENSORLG00020001332YTHDF19975.136Oryzias_latipes_hni
ENSRNOG00000027015Ythdf110071.476ENSORLG00015018321YTHDF19974.373Oryzias_latipes_hsok
ENSRNOG00000027015Ythdf19670.242ENSORLG00015006302ythdf19570.205Oryzias_latipes_hsok
ENSRNOG00000027015Ythdf19673.153ENSOMEG00000002941YTHDF19873.132Oryzias_melastigma
ENSRNOG00000027015Ythdf110070.292ENSOMEG00000011843YTHDF19571.210Oryzias_melastigma
ENSRNOG00000027015Ythdf110091.413ENSOGAG00000000480YTHDF110091.413Otolemur_garnettii
ENSRNOG00000027015Ythdf19983.848ENSOARG00000011639YTHDF19885.118Ovis_aries
ENSRNOG00000027015Ythdf19994.011ENSPPAG00000023277YTHDF110094.011Pan_paniscus
ENSRNOG00000027015Ythdf110092.129ENSPPRG00000020805YTHDF110092.129Panthera_pardus
ENSRNOG00000027015Ythdf19981.851ENSPTIG00000017355YTHDF19982.396Panthera_tigris_altaica
ENSRNOG00000027015Ythdf110093.918ENSPTRG00000013730YTHDF110093.918Pan_troglodytes
ENSRNOG00000027015Ythdf110093.918ENSPANG00000021472YTHDF110093.918Papio_anubis
ENSRNOG00000027015Ythdf110069.231ENSPKIG00000005427ythdf110069.072Paramormyrops_kingsleyae
ENSRNOG00000027015Ythdf19972.776ENSPKIG00000005026YTHDF19773.056Paramormyrops_kingsleyae
ENSRNOG00000027015Ythdf19789.927ENSPSIG00000005529YTHDF19690.317Pelodiscus_sinensis
ENSRNOG00000027015Ythdf19371.661ENSPMGG00000015328ythdf19671.942Periophthalmus_magnuspinnatus
ENSRNOG00000027015Ythdf19773.630ENSPMGG00000009101YTHDF19973.413Periophthalmus_magnuspinnatus
ENSRNOG00000027015Ythdf19898.545ENSPEMG00000020199Ythdf110098.545Peromyscus_maniculatus_bairdii
ENSRNOG00000027015Ythdf19989.170ENSPCIG00000017170YTHDF110090.607Phascolarctos_cinereus
ENSRNOG00000027015Ythdf19970.270ENSPFOG00000005405ythdf19570.690Poecilia_formosa
ENSRNOG00000027015Ythdf19972.663ENSPLAG00000006653ythdf19872.630Poecilia_latipinna
ENSRNOG00000027015Ythdf110070.370ENSPLAG00000006298YTHDF19571.138Poecilia_latipinna
ENSRNOG00000027015Ythdf19971.908ENSPMEG00000023753ythdf19871.864Poecilia_mexicana
ENSRNOG00000027015Ythdf110072.997ENSPMEG00000020969-10072.997Poecilia_mexicana
ENSRNOG00000027015Ythdf19971.681ENSPREG00000002173ythdf19872.352Poecilia_reticulata
ENSRNOG00000027015Ythdf19770.647ENSPREG00000017662YTHDF19370.804Poecilia_reticulata
ENSRNOG00000027015Ythdf19876.799ENSPPYG00000011226YTHDF110098.010Pongo_abelii
ENSRNOG00000027015Ythdf18986.061ENSPCAG00000002452YTHDF19885.972Procavia_capensis
ENSRNOG00000027015Ythdf110093.918ENSPCOG00000025969YTHDF110093.918Propithecus_coquereli
ENSRNOG00000027015Ythdf19883.091ENSPVAG00000017568YTHDF19883.241Pteropus_vampyrus
ENSRNOG00000027015Ythdf110074.042ENSPNYG00000002266YTHDF110073.575Pundamilia_nyererei
ENSRNOG00000027015Ythdf19673.036ENSPNYG00000014007ythdf19873.582Pundamilia_nyererei
ENSRNOG00000027015Ythdf110070.588ENSPNAG00000012447ythdf110074.735Pygocentrus_nattereri
ENSRNOG00000027015Ythdf110093.023ENSRBIG00000044959YTHDF110093.023Rhinopithecus_bieti
ENSRNOG00000027015Ythdf110092.844ENSRROG00000033014YTHDF110092.844Rhinopithecus_roxellana
ENSRNOG00000027015Ythdf19791.513ENSSBOG00000027278YTHDF110091.749Saimiri_boliviensis_boliviensis
ENSRNOG00000027015Ythdf19988.530ENSSHAG00000010430YTHDF18989.785Sarcophilus_harrisii
ENSRNOG00000027015Ythdf110073.390ENSSFOG00015000284ythdf110073.729Scleropages_formosus
ENSRNOG00000027015Ythdf19579.675ENSSMAG00000007635YTHDF19473.628Scophthalmus_maximus
ENSRNOG00000027015Ythdf17284.106ENSSMAG00000013715ythdf19464.694Scophthalmus_maximus
ENSRNOG00000027015Ythdf19673.524ENSSDUG00000000435ythdf19673.179Seriola_dumerili
ENSRNOG00000027015Ythdf19975.528ENSSDUG00000015823YTHDF19974.205Seriola_dumerili
ENSRNOG00000027015Ythdf19670.669ENSSLDG00000024948ythdf19670.528Seriola_lalandi_dorsalis
ENSRNOG00000027015Ythdf110069.778ENSSLDG00000001054YTHDF110072.566Seriola_lalandi_dorsalis
ENSRNOG00000027015Ythdf19187.451ENSSPUG00000015143YTHDF110087.451Sphenodon_punctatus
ENSRNOG00000027015Ythdf110073.402ENSSPAG00000003666YTHDF110072.945Stegastes_partitus
ENSRNOG00000027015Ythdf19669.932ENSSPAG00000014989ythdf19670.017Stegastes_partitus
ENSRNOG00000027015Ythdf110088.750ENSSSCG00000040086YTHDF110089.107Sus_scrofa
ENSRNOG00000027015Ythdf19989.150ENSTGUG00000007565YTHDF110090.054Taeniopygia_guttata
ENSRNOG00000027015Ythdf19971.380ENSTRUG00000004288ythdf19870.205Takifugu_rubripes
ENSRNOG00000027015Ythdf19670.847ENSTRUG00000005049YTHDF19870.489Takifugu_rubripes
ENSRNOG00000027015Ythdf110073.252ENSTNIG00000003975YTHDF110072.552Tetraodon_nigroviridis
ENSRNOG00000027015Ythdf19971.303ENSTNIG00000012490ythdf19972.154Tetraodon_nigroviridis
ENSRNOG00000027015Ythdf19988.225ENSTTRG00000001804YTHDF19888.214Tursiops_truncatus
ENSRNOG00000027015Ythdf19792.620ENSUAMG00000011021YTHDF110092.534Ursus_americanus
ENSRNOG00000027015Ythdf19192.534ENSUMAG00000022290YTHDF110092.534Ursus_maritimus
ENSRNOG00000027015Ythdf19192.520ENSVVUG00000015275YTHDF19992.520Vulpes_vulpes
ENSRNOG00000027015Ythdf19783.273ENSXETG00000027086ythdf19483.521Xenopus_tropicalis
ENSRNOG00000027015Ythdf19770.978ENSXCOG00000008115YTHDF19470.804Xiphophorus_couchianus
ENSRNOG00000027015Ythdf19672.263ENSXCOG00000002490ythdf19372.963Xiphophorus_couchianus
ENSRNOG00000027015Ythdf19774.955ENSXMAG00000015644YTHDF19974.332Xiphophorus_maculatus
ENSRNOG00000027015Ythdf19672.810ENSXMAG00000008525ythdf19473.148Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0043022ribosome binding-IEAFunction
GO:0043022ribosome binding-ISOFunction
GO:0045727positive regulation of translation-ISOProcess
GO:0045948positive regulation of translational initiation-IEAProcess
GO:0045948positive regulation of translational initiation-ISOProcess
GO:1990247N6-methyladenosine-containing RNA binding-IEAFunction
GO:1990247N6-methyladenosine-containing RNA binding-ISOFunction

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