EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000027017 (Gene tree)
Gene ID: 359726
Gene Symbol: Rnasel
Alias: -
Full Name: ribonuclease L
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 10484 bases
Position: chr13:71192142-71202625
Accession: 727933
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000032975	Ribonuc_2-5A	PF06479.12	2.6e-27	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000032157	-	4797	XM_006249998	ENSRNOP00000032975	738 (aa)	XP_006250060	G3V915

Gene Model

Click here to download ENSRNOG00000027017's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04621	NOD-like receptor signaling pathway	KEGG
rno05160	Hepatitis C	KEGG
rno05164	Influenza A	KEGG
rno05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000027017's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000027017	Rnasel	99	63.008	ENSG00000135828	RNASEL	99	63.008	Homo_sapiens
ENSRNOG00000027017	Rnasel	98	59.697	ENSAMEG00000007756	RNASEL	99	59.697	Ailuropoda_melanoleuca
ENSRNOG00000027017	Rnasel	92	40.902	ENSAPLG00000009854	RNASEL	99	40.197	Anas_platyrhynchos
ENSRNOG00000027017	Rnasel	94	42.957	ENSACAG00000004961	RNASEL	97	43.096	Anolis_carolinensis
ENSRNOG00000027017	Rnasel	99	61.685	ENSANAG00000036044	RNASEL	99	61.685	Aotus_nancymaae
ENSRNOG00000027017	Rnasel	98	59.085	ENSBTAG00000009091	RNASEL	99	59.085	Bos_taurus
ENSRNOG00000027017	Rnasel	98	62.932	ENSCJAG00000004725	RNASEL	99	62.046	Callithrix_jacchus
ENSRNOG00000027017	Rnasel	98	59.418	ENSCAFG00000013121	RNASEL	99	59.418	Canis_familiaris
ENSRNOG00000027017	Rnasel	98	59.557	ENSCAFG00020014858	RNASEL	100	59.064	Canis_lupus_dingo
ENSRNOG00000027017	Rnasel	98	59.091	ENSCHIG00000021530	RNASEL	99	59.091	Capra_hircus
ENSRNOG00000027017	Rnasel	99	59.595	ENSTSYG00000000281	RNASEL	99	59.595	Carlito_syrichta
ENSRNOG00000027017	Rnasel	99	61.570	ENSCCAG00000032500	RNASEL	99	61.570	Cebus_capucinus
ENSRNOG00000027017	Rnasel	99	62.737	ENSCATG00000038808	RNASEL	99	62.737	Cercocebus_atys
ENSRNOG00000027017	Rnasel	98	60.443	ENSCLAG00000011944	RNASEL	97	60.443	Chinchilla_lanigera
ENSRNOG00000027017	Rnasel	99	63.428	ENSCSAG00000012514	RNASEL	99	63.428	Chlorocebus_sabaeus
ENSRNOG00000027017	Rnasel	97	44.611	ENSCPBG00000015776	-	99	44.611	Chrysemys_picta_bellii
ENSRNOG00000027017	Rnasel	98	63.786	ENSCANG00000041251	RNASEL	99	63.786	Colobus_angolensis_palliatus
ENSRNOG00000027017	Rnasel	99	67.571	ENSCGRG00001008939	Rnasel	99	67.571	Cricetulus_griseus_chok1gshd
ENSRNOG00000027017	Rnasel	99	67.571	ENSCGRG00000009259	Rnasel	99	67.571	Cricetulus_griseus_crigri
ENSRNOG00000027017	Rnasel	98	58.807	ENSDNOG00000017705	RNASEL	98	58.807	Dasypus_novemcinctus
ENSRNOG00000027017	Rnasel	94	60.699	ENSDORG00000005886	Rnasel	97	60.699	Dipodomys_ordii
ENSRNOG00000027017	Rnasel	87	60.630	ENSETEG00000008370	RNASEL	79	60.630	Echinops_telfairi
ENSRNOG00000027017	Rnasel	97	61.304	ENSEASG00005006600	RNASEL	99	61.304	Equus_asinus_asinus
ENSRNOG00000027017	Rnasel	97	61.165	ENSECAG00000015188	RNASEL	99	61.165	Equus_caballus
ENSRNOG00000027017	Rnasel	89	49.398	ENSEEUG00000011471	RNASEL	98	49.398	Erinaceus_europaeus
ENSRNOG00000027017	Rnasel	98	60.028	ENSFCAG00000024554	RNASEL	99	60.028	Felis_catus
ENSRNOG00000027017	Rnasel	93	39.105	ENSFALG00000008002	RNASEL	95	39.105	Ficedula_albicollis
ENSRNOG00000027017	Rnasel	82	66.667	ENSFDAG00000016599	RNASEL	96	66.667	Fukomys_damarensis
ENSRNOG00000027017	Rnasel	94	39.943	ENSGALG00000042986	RNASEL	99	39.943	Gallus_gallus
ENSRNOG00000027017	Rnasel	99	63.144	ENSGGOG00000023414	RNASEL	99	63.144	Gorilla_gorilla
ENSRNOG00000027017	Rnasel	92	59.531	ENSHGLG00100009841	RNASEL	99	59.531	Heterocephalus_glaber_male
ENSRNOG00000027017	Rnasel	99	61.601	ENSSTOG00000007352	RNASEL	99	61.601	Ictidomys_tridecemlineatus
ENSRNOG00000027017	Rnasel	99	50.470	ENSJJAG00000013606	Rnasel	99	53.154	Jaculus_jaculus
ENSRNOG00000027017	Rnasel	93	40.228	ENSLACG00000000804	RNASEL	97	40.228	Latimeria_chalumnae
ENSRNOG00000027017	Rnasel	98	57.514	ENSLAFG00000022307	RNASEL	97	57.923	Loxodonta_africana
ENSRNOG00000027017	Rnasel	99	64.103	ENSMFAG00000044965	RNASEL	99	64.103	Macaca_fascicularis
ENSRNOG00000027017	Rnasel	99	63.698	ENSMNEG00000032732	RNASEL	99	63.698	Macaca_nemestrina
ENSRNOG00000027017	Rnasel	99	63.279	ENSMLEG00000037368	RNASEL	99	63.279	Mandrillus_leucophaeus
ENSRNOG00000027017	Rnasel	94	39.515	ENSMGAG00000003316	RNASEL	96	39.515	Meleagris_gallopavo
ENSRNOG00000027017	Rnasel	99	66.531	ENSMAUG00000020643	Rnasel	99	66.531	Mesocricetus_auratus
ENSRNOG00000027017	Rnasel	99	60.651	ENSMICG00000026907	RNASEL	98	60.651	Microcebus_murinus
ENSRNOG00000027017	Rnasel	100	68.336	ENSMOCG00000009828	Rnasel	100	68.336	Microtus_ochrogaster
ENSRNOG00000027017	Rnasel	94	53.372	ENSMODG00000006829	RNASEL	92	53.372	Monodelphis_domestica
ENSRNOG00000027017	Rnasel	99	78.552	MGP_CAROLIEiJ_G0014713	Rnasel	99	81.982	Mus_caroli
ENSRNOG00000027017	Rnasel	100	78.784	ENSMUSG00000066800	Rnasel	100	83.700	Mus_musculus
ENSRNOG00000027017	Rnasel	99	78.776	MGP_PahariEiJ_G0027949	Rnasel	99	78.776	Mus_pahari
ENSRNOG00000027017	Rnasel	98	78.729	MGP_SPRETEiJ_G0015520	Rnasel	100	78.729	Mus_spretus
ENSRNOG00000027017	Rnasel	98	59.422	ENSMPUG00000011522	RNASEL	99	59.422	Mustela_putorius_furo
ENSRNOG00000027017	Rnasel	98	61.326	ENSMLUG00000010098	RNASEL	97	61.326	Myotis_lucifugus
ENSRNOG00000027017	Rnasel	99	62.348	ENSNLEG00000018010	RNASEL	99	62.348	Nomascus_leucogenys
ENSRNOG00000027017	Rnasel	97	59.358	ENSODEG00000002238	RNASEL	96	59.358	Octodon_degus
ENSRNOG00000027017	Rnasel	94	52.436	ENSOANG00000000982	RNASEL	98	52.436	Ornithorhynchus_anatinus
ENSRNOG00000027017	Rnasel	97	52.301	ENSOCUG00000015922	RNASEL	97	52.301	Oryctolagus_cuniculus
ENSRNOG00000027017	Rnasel	99	60.109	ENSOGAG00000002612	RNASEL	99	60.109	Otolemur_garnettii
ENSRNOG00000027017	Rnasel	99	58.639	ENSOARG00000018978	RNASEL	99	58.639	Ovis_aries
ENSRNOG00000027017	Rnasel	99	63.008	ENSPPAG00000029542	RNASEL	99	63.008	Pan_paniscus
ENSRNOG00000027017	Rnasel	98	60.166	ENSPPRG00000003895	RNASEL	99	60.166	Panthera_pardus
ENSRNOG00000027017	Rnasel	98	59.336	ENSPTIG00000017036	RNASEL	99	59.336	Panthera_tigris_altaica
ENSRNOG00000027017	Rnasel	99	63.144	ENSPTRG00000001755	RNASEL	99	63.144	Pan_troglodytes
ENSRNOG00000027017	Rnasel	99	62.602	ENSPANG00000016769	RNASEL	99	62.602	Papio_anubis
ENSRNOG00000027017	Rnasel	97	41.403	ENSPSIG00000008045	-	99	41.403	Pelodiscus_sinensis
ENSRNOG00000027017	Rnasel	98	46.322	ENSPSIG00000007735	-	99	46.458	Pelodiscus_sinensis
ENSRNOG00000027017	Rnasel	100	72.027	ENSPEMG00000012855	Rnasel	100	72.027	Peromyscus_maniculatus_bairdii
ENSRNOG00000027017	Rnasel	94	53.736	ENSPCIG00000018112	RNASEL	96	53.736	Phascolarctos_cinereus
ENSRNOG00000027017	Rnasel	99	63.563	ENSPPYG00000000435	RNASEL	99	63.563	Pongo_abelii
ENSRNOG00000027017	Rnasel	56	57.471	ENSPCAG00000015612	-	56	58.610	Procavia_capensis
ENSRNOG00000027017	Rnasel	98	61.496	ENSPCOG00000013879	RNASEL	97	61.496	Propithecus_coquereli
ENSRNOG00000027017	Rnasel	98	59.141	ENSPVAG00000010445	RNASEL	98	59.141	Pteropus_vampyrus
ENSRNOG00000027017	Rnasel	99	62.873	ENSRBIG00000044741	RNASEL	99	62.873	Rhinopithecus_bieti
ENSRNOG00000027017	Rnasel	99	62.737	ENSRROG00000035978	RNASEL	99	62.737	Rhinopithecus_roxellana
ENSRNOG00000027017	Rnasel	99	61.892	ENSSBOG00000034574	RNASEL	99	61.892	Saimiri_boliviensis_boliviensis
ENSRNOG00000027017	Rnasel	98	58.254	ENSSSCG00000015549	RNASEL	98	58.527	Sus_scrofa
ENSRNOG00000027017	Rnasel	79	67.073	ENSTBEG00000004013	RNASEL	78	67.073	Tupaia_belangeri
ENSRNOG00000027017	Rnasel	99	56.658	ENSTTRG00000007635	RNASEL	99	56.658	Tursiops_truncatus
ENSRNOG00000027017	Rnasel	98	59.835	ENSUMAG00000016510	RNASEL	99	59.835	Ursus_maritimus
ENSRNOG00000027017	Rnasel	98	59.613	ENSVVUG00000008895	RNASEL	99	59.613	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	ISO	Function
GO:0004540	ribonuclease activity	8469023.	IDA	Function
GO:0004672	protein kinase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0006364	rRNA processing	8469023.	IDA	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0006468	protein phosphorylation	-	IEA	Process
GO:0016363	nuclear matrix	8469023.	IDA	Component
GO:0019843	rRNA binding	8469023.	IDA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0043021	ribonucleoprotein complex binding	-	ISO	Function
GO:0043488	regulation of mRNA stability	-	ISO	Process
GO:0045071	negative regulation of viral genome replication	-	IEA	Process
GO:0045071	negative regulation of viral genome replication	-	ISO	Process
GO:0045444	fat cell differentiation	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0046326	positive regulation of glucose import	-	ISO	Process
GO:0051607	defense response to virus	-	IEA	Process
GO:0051607	defense response to virus	-	ISO	Process
GO:0090501	RNA phosphodiester bond hydrolysis	-	IEA	Process