EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000027239 (Gene tree)
Gene ID: -
Gene Symbol: AABR07037800.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 951 bases
Position: chrX:31054394-31055344
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000038996	RRM_1	PF00076.22	4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000037439	AABR07037800.1-201	903	-	ENSRNOP00000038996	301 (aa)	-	F1M6U2

Gene Model

Click here to download ENSRNOG00000027239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000027239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000027239	AABR07037800.1	65	84.653	ENSG00000205937	RNPS1	96	84.663	Homo_sapiens
ENSRNOG00000027239	AABR07037800.1	70	61.137	ENSACIG00000014367	-	80	59.193	Amphilophus_citrinellus
ENSRNOG00000027239	AABR07037800.1	76	59.914	ENSAPLG00000006231	RNPS1	63	87.302	Anas_platyrhynchos
ENSRNOG00000027239	AABR07037800.1	73	79.204	ENSACAG00000004088	RNPS1	91	80.531	Anolis_carolinensis
ENSRNOG00000027239	AABR07037800.1	65	84.080	ENSANAG00000028802	RNPS1	85	86.486	Aotus_nancymaae
ENSRNOG00000027239	AABR07037800.1	79	70.464	ENSAMXG00000006330	-	91	64.000	Astyanax_mexicanus
ENSRNOG00000027239	AABR07037800.1	75	83.117	ENSCJAG00000014969	RNPS1	97	84.416	Callithrix_jacchus
ENSRNOG00000027239	AABR07037800.1	77	80.508	ENSCAFG00020026159	RNPS1	94	86.697	Canis_lupus_dingo
ENSRNOG00000027239	AABR07037800.1	93	53.546	ENSCHIG00000027175	-	72	57.075	Capra_hircus
ENSRNOG00000027239	AABR07037800.1	84	56.693	ENSCHIG00000019523	-	82	54.286	Capra_hircus
ENSRNOG00000027239	AABR07037800.1	66	84.236	ENSCHIG00000014621	-	79	76.293	Capra_hircus
ENSRNOG00000027239	AABR07037800.1	75	72.016	ENSTSYG00000001629	RNPS1	85	86.873	Carlito_syrichta
ENSRNOG00000027239	AABR07037800.1	65	84.080	ENSCCAG00000034480	RNPS1	85	86.486	Cebus_capucinus
ENSRNOG00000027239	AABR07037800.1	77	81.356	ENSCATG00000013756	RNPS1	96	82.627	Cercocebus_atys
ENSRNOG00000027239	AABR07037800.1	52	78.981	ENSCATG00000042361	-	81	80.816	Cercocebus_atys
ENSRNOG00000027239	AABR07037800.1	88	84.191	ENSCSAG00000005219	-	81	85.477	Chlorocebus_sabaeus
ENSRNOG00000027239	AABR07037800.1	75	82.684	ENSCANG00000041307	RNPS1	91	86.818	Colobus_angolensis_palliatus
ENSRNOG00000027239	AABR07037800.1	76	86.383	ENSCGRG00000014021	Rnps1	79	87.137	Cricetulus_griseus_crigri
ENSRNOG00000027239	AABR07037800.1	83	66.800	ENSCSEG00000000402	RNPS1	82	66.800	Cynoglossus_semilaevis
ENSRNOG00000027239	AABR07037800.1	77	80.672	ENSECAG00000023288	RNPS1	87	80.000	Equus_caballus
ENSRNOG00000027239	AABR07037800.1	70	68.095	ENSELUG00000015003	RNPS1	80	66.667	Esox_lucius
ENSRNOG00000027239	AABR07037800.1	65	84.158	ENSFCAG00000007690	RNPS1	85	86.486	Felis_catus
ENSRNOG00000027239	AABR07037800.1	70	60.280	ENSFHEG00000011705	RNPS1	79	64.159	Fundulus_heteroclitus
ENSRNOG00000027239	AABR07037800.1	78	58.824	ENSGMOG00000001503	RNPS1	85	61.633	Gadus_morhua
ENSRNOG00000027239	AABR07037800.1	67	83.981	ENSGGOG00000026421	-	79	84.466	Gorilla_gorilla
ENSRNOG00000027239	AABR07037800.1	72	85.068	ENSGGOG00000014275	RNPS1	94	85.135	Gorilla_gorilla
ENSRNOG00000027239	AABR07037800.1	77	81.405	ENSHGLG00000006292	-	95	81.818	Heterocephalus_glaber_female
ENSRNOG00000027239	AABR07037800.1	77	71.849	ENSHGLG00100017879	-	81	70.325	Heterocephalus_glaber_male
ENSRNOG00000027239	AABR07037800.1	65	81.000	ENSHGLG00100011610	-	82	79.500	Heterocephalus_glaber_male
ENSRNOG00000027239	AABR07037800.1	83	81.176	ENSHGLG00100015267	-	86	83.193	Heterocephalus_glaber_male
ENSRNOG00000027239	AABR07037800.1	71	55.814	ENSHCOG00000002546	-	52	69.173	Hippocampus_comes
ENSRNOG00000027239	AABR07037800.1	84	68.379	ENSSTOG00000013200	RNPS1	83	79.134	Ictidomys_tridecemlineatus
ENSRNOG00000027239	AABR07037800.1	84	75.099	ENSJJAG00000019234	-	73	76.285	Jaculus_jaculus
ENSRNOG00000027239	AABR07037800.1	76	68.421	ENSJJAG00000010326	-	82	68.333	Jaculus_jaculus
ENSRNOG00000027239	AABR07037800.1	65	84.653	ENSMFAG00000042142	RNPS1	85	86.873	Macaca_fascicularis
ENSRNOG00000027239	AABR07037800.1	85	61.832	ENSMFAG00000044121	-	91	75.665	Macaca_fascicularis
ENSRNOG00000027239	AABR07037800.1	65	84.653	ENSMMUG00000019238	-	79	85.149	Macaca_mulatta
ENSRNOG00000027239	AABR07037800.1	85	80.460	ENSMMUG00000041726	-	86	81.224	Macaca_mulatta
ENSRNOG00000027239	AABR07037800.1	85	80.843	ENSMNEG00000024827	-	86	81.633	Macaca_nemestrina
ENSRNOG00000027239	AABR07037800.1	67	72.816	ENSMLEG00000040232	-	92	70.638	Mandrillus_leucophaeus
ENSRNOG00000027239	AABR07037800.1	65	84.653	ENSMLEG00000036928	RNPS1	85	86.873	Mandrillus_leucophaeus
ENSRNOG00000027239	AABR07037800.1	80	66.805	ENSMAMG00000021148	-	84	66.667	Mastacembelus_armatus
ENSRNOG00000027239	AABR07037800.1	77	82.203	ENSMGAG00000010042	RNPS1	98	83.122	Meleagris_gallopavo
ENSRNOG00000027239	AABR07037800.1	94	67.958	ENSMOCG00000000276	-	82	69.444	Microtus_ochrogaster
ENSRNOG00000027239	AABR07037800.1	70	64.286	ENSMMOG00000010863	RNPS1	80	62.613	Mola_mola
ENSRNOG00000027239	AABR07037800.1	78	66.245	ENSNBRG00000014540	-	87	66.245	Neolamprologus_brichardi
ENSRNOG00000027239	AABR07037800.1	70	65.238	ENSNBRG00000023437	RNPS1	80	63.514	Neolamprologus_brichardi
ENSRNOG00000027239	AABR07037800.1	50	61.745	ENSODEG00000002513	-	51	59.167	Octodon_degus
ENSRNOG00000027239	AABR07037800.1	78	66.102	ENSONIG00000019627	-	85	65.823	Oreochromis_niloticus
ENSRNOG00000027239	AABR07037800.1	72	84.615	ENSPPAG00000037836	-	94	84.685	Pan_paniscus
ENSRNOG00000027239	AABR07037800.1	65	84.158	ENSPPRG00000011255	RNPS1	85	86.486	Panthera_pardus
ENSRNOG00000027239	AABR07037800.1	63	82.550	ENSPTIG00000015643	RNPS1	82	90.698	Panthera_tigris_altaica
ENSRNOG00000027239	AABR07037800.1	65	84.158	ENSPTRG00000031310	RNPS1	85	86.486	Pan_troglodytes
ENSRNOG00000027239	AABR07037800.1	71	84.091	ENSPTRG00000046326	-	92	78.279	Pan_troglodytes
ENSRNOG00000027239	AABR07037800.1	65	84.653	ENSPANG00000015748	RNPS1	85	86.873	Papio_anubis
ENSRNOG00000027239	AABR07037800.1	66	54.902	ENSPANG00000033576	-	88	55.217	Papio_anubis
ENSRNOG00000027239	AABR07037800.1	50	83.893	ENSPCIG00000016114	-	66	88.889	Phascolarctos_cinereus
ENSRNOG00000027239	AABR07037800.1	65	84.158	ENSPCOG00000005478	RNPS1	85	86.486	Propithecus_coquereli
ENSRNOG00000027239	AABR07037800.1	78	71.489	ENSPNAG00000025479	RNPS1	84	71.186	Pygocentrus_nattereri
ENSRNOG00000027239	AABR07037800.1	70	78.125	ENSRBIG00000038965	-	95	84.615	Rhinopithecus_bieti
ENSRNOG00000027239	AABR07037800.1	75	82.684	ENSRROG00000041252	RNPS1	91	86.818	Rhinopithecus_roxellana
ENSRNOG00000027239	AABR07037800.1	65	84.577	ENSSBOG00000027927	RNPS1	85	86.873	Saimiri_boliviensis_boliviensis
ENSRNOG00000027239	AABR07037800.1	79	68.050	ENSSFOG00015019341	-	76	68.333	Scleropages_formosus
ENSRNOG00000027239	AABR07037800.1	78	66.667	ENSSFOG00015022746	RNPS1	87	65.975	Scleropages_formosus
ENSRNOG00000027239	AABR07037800.1	78	69.492	ENSSMAG00000016933	RNPS1	84	69.198	Scophthalmus_maximus
ENSRNOG00000027239	AABR07037800.1	66	84.314	ENSUAMG00000004462	RNPS1	95	86.873	Ursus_americanus
ENSRNOG00000027239	AABR07037800.1	75	67.521	ENSXETG00000024439	rnps1	76	67.521	Xenopus_tropicalis