EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000027513 (Gene tree)
Gene ID: 362288
Gene Symbol: Rtel1
Alias: LOC362288|RGD1306721
Full Name: regulator of telomere elongation helicase 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 38095 bases
Position: chr3:176818437-176856531
Accession: 1306721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000069471	ResIII	PF04851.15	9.4e-08	1	1
ENSRNOP00000051909	ResIII	PF04851.15	9.6e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000055030	-	4237	-	ENSRNOP00000051909	1274 (aa)	-	Q5RJZ1
ENSRNOT00000087279	-	4279	XM_006235772	ENSRNOP00000069471	1271 (aa)	XP_006235834	A0A0G2JVG0

Gene Model

Click here to download ENSRNOG00000027513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000027513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000027513	Rtel1	100	73.813	ENSG00000258366	RTEL1	100	86.517	Homo_sapiens
ENSRNOG00000027513	Rtel1	100	70.244	ENSAMEG00000001689	-	100	70.624	Ailuropoda_melanoleuca
ENSRNOG00000027513	Rtel1	54	39.726	ENSCJAG00000001292	BRIP1	79	39.726	Callithrix_jacchus
ENSRNOG00000027513	Rtel1	100	70.933	ENSCAFG00020001919	-	100	71.010	Canis_lupus_dingo
ENSRNOG00000027513	Rtel1	57	41.096	ENSCCAG00000024685	BRIP1	76	41.096	Cebus_capucinus
ENSRNOG00000027513	Rtel1	58	44.262	ENSCATG00000041725	BRIP1	60	44.262	Cercocebus_atys
ENSRNOG00000027513	Rtel1	100	72.720	ENSCATG00000013982	-	100	72.797	Cercocebus_atys
ENSRNOG00000027513	Rtel1	95	76.226	ENSCLAG00000005519	-	99	76.226	Chinchilla_lanigera
ENSRNOG00000027513	Rtel1	59	38.356	ENSCSAG00000005928	BRIP1	60	38.356	Chlorocebus_sabaeus
ENSRNOG00000027513	Rtel1	56	39.344	ENSCPBG00000009376	BRIP1	55	39.344	Chrysemys_picta_bellii
ENSRNOG00000027513	Rtel1	58	42.688	ENSCSAVG00000002028	-	99	42.688	Ciona_savignyi
ENSRNOG00000027513	Rtel1	60	38.356	ENSCANG00000032026	BRIP1	60	38.356	Colobus_angolensis_palliatus
ENSRNOG00000027513	Rtel1	94	74.792	ENSDORG00000013483	Rtel1	99	75.121	Dipodomys_ordii
ENSRNOG00000027513	Rtel1	99	72.270	ENSEASG00005023163	-	99	75.123	Equus_asinus_asinus
ENSRNOG00000027513	Rtel1	99	74.221	ENSECAG00000021707	-	99	76.896	Equus_caballus
ENSRNOG00000027513	Rtel1	56	39.344	ENSGAGG00000003822	BRIP1	56	39.344	Gopherus_agassizii
ENSRNOG00000027513	Rtel1	100	57.009	ENSGGOG00000042405	RTEL1	97	59.278	Gorilla_gorilla
ENSRNOG00000027513	Rtel1	100	74.568	ENSHGLG00000005511	-	100	74.568	Heterocephalus_glaber_female
ENSRNOG00000027513	Rtel1	100	74.297	ENSHGLG00100002438	-	100	74.297	Heterocephalus_glaber_male
ENSRNOG00000027513	Rtel1	99	64.363	ENSLAFG00000021665	-	99	64.363	Loxodonta_africana
ENSRNOG00000027513	Rtel1	58	44.262	ENSMFAG00000044136	BRIP1	59	44.262	Macaca_fascicularis
ENSRNOG00000027513	Rtel1	100	72.936	ENSMFAG00000043680	-	100	72.936	Macaca_fascicularis
ENSRNOG00000027513	Rtel1	100	69.785	ENSMMUG00000000167	-	100	69.785	Macaca_mulatta
ENSRNOG00000027513	Rtel1	58	44.262	ENSMMUG00000009027	BRIP1	60	44.262	Macaca_mulatta
ENSRNOG00000027513	Rtel1	58	44.262	ENSMNEG00000040728	BRIP1	74	44.262	Macaca_nemestrina
ENSRNOG00000027513	Rtel1	58	44.262	ENSMLEG00000037601	BRIP1	59	44.262	Mandrillus_leucophaeus
ENSRNOG00000027513	Rtel1	100	59.045	ENSPPAG00000033509	-	100	59.045	Pan_paniscus
ENSRNOG00000027513	Rtel1	95	56.593	ENSPTRG00000048787	-	100	56.593	Pan_troglodytes
ENSRNOG00000027513	Rtel1	100	73.089	ENSPANG00000020635	-	100	73.089	Papio_anubis
ENSRNOG00000027513	Rtel1	58	44.262	ENSPANG00000022169	BRIP1	59	44.262	Papio_anubis
ENSRNOG00000027513	Rtel1	56	39.344	ENSPSIG00000018052	BRIP1	57	39.344	Pelodiscus_sinensis
ENSRNOG00000027513	Rtel1	99	55.843	ENSPCIG00000017939	-	99	55.956	Phascolarctos_cinereus
ENSRNOG00000027513	Rtel1	100	72.218	ENSPCOG00000013374	-	100	72.218	Propithecus_coquereli
ENSRNOG00000027513	Rtel1	59	38.356	ENSRBIG00000024082	BRIP1	61	38.356	Rhinopithecus_bieti
ENSRNOG00000027513	Rtel1	100	72.678	ENSRROG00000038795	-	100	72.678	Rhinopithecus_roxellana
ENSRNOG00000027513	Rtel1	57	38.356	ENSSBOG00000035665	BRIP1	73	38.356	Saimiri_boliviensis_boliviensis
ENSRNOG00000027513	Rtel1	100	70.611	ENSUAMG00000009334	-	95	77.140	Ursus_americanus
ENSRNOG00000027513	Rtel1	100	63.679	ENSUMAG00000022059	-	100	63.679	Ursus_maritimus
ENSRNOG00000027513	Rtel1	92	70.707	ENSVVUG00000015049	-	97	70.707	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000723	telomere maintenance	-	IEA	Process
GO:0000723	telomere maintenance	-	ISO	Process
GO:0000723	telomere maintenance	-	ISS	Process
GO:0000732	strand displacement	-	IEA	Process
GO:0000732	strand displacement	-	ISO	Process
GO:0000781	chromosome, telomeric region	-	IEA	Component
GO:0000781	chromosome, telomeric region	-	ISO	Component
GO:0003677	DNA binding	-	IEA	Function
GO:0004003	ATP-dependent DNA helicase activity	21873635.	IBA	Function
GO:0004003	ATP-dependent DNA helicase activity	-	IEA	Function
GO:0004003	ATP-dependent DNA helicase activity	-	ISO	Function
GO:0004003	ATP-dependent DNA helicase activity	-	ISS	Function
GO:0005524	ATP binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005524	ATP binding	-	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0006260	DNA replication	-	IEA	Process
GO:0006281	DNA repair	-	IEA	Process
GO:0006310	DNA recombination	-	IEA	Process
GO:0010569	regulation of double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:0010569	regulation of double-strand break repair via homologous recombination	-	IEA	Process
GO:0010569	regulation of double-strand break repair via homologous recombination	-	ISO	Process
GO:0010569	regulation of double-strand break repair via homologous recombination	-	ISS	Process
GO:0031297	replication fork processing	-	IEA	Process
GO:0031297	replication fork processing	-	ISO	Process
GO:0032206	positive regulation of telomere maintenance	-	ISO	Process
GO:0032508	DNA duplex unwinding	21873635.	IBA	Process
GO:0032508	DNA duplex unwinding	-	IEA	Process
GO:0032508	DNA duplex unwinding	-	ISO	Process
GO:0043247	telomere maintenance in response to DNA damage	-	IEA	Process
GO:0043247	telomere maintenance in response to DNA damage	-	ISO	Process
GO:0045910	negative regulation of DNA recombination	21873635.	IBA	Process
GO:0045910	negative regulation of DNA recombination	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051539	4 iron, 4 sulfur cluster binding	-	IEA	Function
GO:0070182	DNA polymerase binding	21873635.	IBA	Function
GO:0070182	DNA polymerase binding	-	ISO	Function
GO:0090657	telomeric loop disassembly	21873635.	IBA	Process
GO:0090657	telomeric loop disassembly	-	ISO	Process
GO:1902990	mitotic telomere maintenance via semi-conservative replication	-	IEA	Process
GO:1902990	mitotic telomere maintenance via semi-conservative replication	-	ISO	Process
GO:1904355	positive regulation of telomere capping	-	ISO	Process
GO:1904358	positive regulation of telomere maintenance via telomere lengthening	-	ISO	Process
GO:1904430	negative regulation of t-circle formation	21873635.	IBA	Process
GO:1904430	negative regulation of t-circle formation	-	ISO	Process
GO:1904506	negative regulation of telomere maintenance in response to DNA damage	-	IEA	Process
GO:1904506	negative regulation of telomere maintenance in response to DNA damage	-	ISO	Process
GO:1904535	positive regulation of telomeric loop disassembly	-	IEA	Process
GO:1904535	positive regulation of telomeric loop disassembly	-	ISO	Process