EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000027707 (Gene tree)
Gene ID: 362759
Gene Symbol: Exd2
Alias: Exdl2|LOC362759|RGD1311087
Full Name: exonuclease 3'-5' domain containing 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 33840 bases
Position: chr6:104017607-104051446
Accession: 1311087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000030862	DNA_pol_A_exo1	PF01612.20	1.5e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000033378	-	3570	XM_006240286	ENSRNOP00000030862	648 (aa)	XP_006240348	B2GUW4

Gene Model

Click here to download ENSRNOG00000027707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000027707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000027707	Exd2	100	83.513	ENSG00000081177	EXD2	100	89.474	Homo_sapiens
ENSRNOG00000027707	Exd2	100	53.404	ENSAPOG00000004053	exd2	85	59.173	Acanthochromis_polyacanthus
ENSRNOG00000027707	Exd2	100	81.481	ENSAMEG00000014467	EXD2	98	81.675	Ailuropoda_melanoleuca
ENSRNOG00000027707	Exd2	100	51.667	ENSACIG00000012036	exd2	92	56.627	Amphilophus_citrinellus
ENSRNOG00000027707	Exd2	100	53.835	ENSAOCG00000008005	exd2	87	58.907	Amphiprion_ocellaris
ENSRNOG00000027707	Exd2	100	54.103	ENSAPEG00000006784	exd2	87	59.286	Amphiprion_percula
ENSRNOG00000027707	Exd2	100	53.799	ENSATEG00000019834	exd2	86	59.712	Anabas_testudineus
ENSRNOG00000027707	Exd2	82	71.805	ENSAPLG00000003322	EXD2	99	71.805	Anas_platyrhynchos
ENSRNOG00000027707	Exd2	99	60.863	ENSACAG00000005306	EXD2	99	60.555	Anolis_carolinensis
ENSRNOG00000027707	Exd2	100	82.280	ENSANAG00000024026	EXD2	100	81.818	Aotus_nancymaae
ENSRNOG00000027707	Exd2	100	51.128	ENSACLG00000000445	exd2	86	57.885	Astatotilapia_calliptera
ENSRNOG00000027707	Exd2	100	52.774	ENSAMXG00000043700	exd2	100	53.720	Astyanax_mexicanus
ENSRNOG00000027707	Exd2	99	82.946	ENSBTAG00000010052	EXD2	98	83.096	Bos_taurus
ENSRNOG00000027707	Exd2	100	82.743	ENSCJAG00000014987	EXD2	100	82.280	Callithrix_jacchus
ENSRNOG00000027707	Exd2	100	81.173	ENSCAFG00000016557	EXD2	98	81.517	Canis_familiaris
ENSRNOG00000027707	Exd2	100	81.173	ENSCAFG00020005886	EXD2	98	81.517	Canis_lupus_dingo
ENSRNOG00000027707	Exd2	99	82.016	ENSCHIG00000021919	EXD2	98	81.991	Capra_hircus
ENSRNOG00000027707	Exd2	100	77.932	ENSTSYG00000002206	EXD2	100	77.932	Carlito_syrichta
ENSRNOG00000027707	Exd2	100	79.784	ENSCAPG00000011298	EXD2	100	79.784	Cavia_aperea
ENSRNOG00000027707	Exd2	100	79.784	ENSCPOG00000010018	EXD2	100	79.784	Cavia_porcellus
ENSRNOG00000027707	Exd2	100	82.435	ENSCCAG00000032107	EXD2	100	81.972	Cebus_capucinus
ENSRNOG00000027707	Exd2	100	82.897	ENSCATG00000030404	EXD2	100	82.280	Cercocebus_atys
ENSRNOG00000027707	Exd2	98	81.034	ENSCLAG00000005648	EXD2	99	81.191	Chinchilla_lanigera
ENSRNOG00000027707	Exd2	100	80.902	ENSCSAG00000013084	EXD2	100	80.301	Chlorocebus_sabaeus
ENSRNOG00000027707	Exd2	100	65.798	ENSCPBG00000021585	EXD2	100	66.049	Chrysemys_picta_bellii
ENSRNOG00000027707	Exd2	81	44.068	ENSCING00000016481	-	87	44.068	Ciona_intestinalis
ENSRNOG00000027707	Exd2	100	83.051	ENSCANG00000036359	EXD2	100	82.435	Colobus_angolensis_palliatus
ENSRNOG00000027707	Exd2	100	93.568	ENSCGRG00001022081	Exd2	100	93.568	Cricetulus_griseus_chok1gshd
ENSRNOG00000027707	Exd2	100	90.741	ENSCGRG00000010700	Exd2	90	96.021	Cricetulus_griseus_crigri
ENSRNOG00000027707	Exd2	85	56.014	ENSCSEG00000009761	exd2	74	56.014	Cynoglossus_semilaevis
ENSRNOG00000027707	Exd2	99	54.198	ENSCVAG00000016150	exd2	82	58.792	Cyprinodon_variegatus
ENSRNOG00000027707	Exd2	100	52.511	ENSDARG00000016117	exd2	100	51.982	Danio_rerio
ENSRNOG00000027707	Exd2	99	80.710	ENSDNOG00000046970	EXD2	99	80.556	Dasypus_novemcinctus
ENSRNOG00000027707	Exd2	100	81.944	ENSDORG00000015087	Exd2	100	81.173	Dipodomys_ordii
ENSRNOG00000027707	Exd2	82	39.963	FBgn0037901	CG6744	87	39.963	Drosophila_melanogaster
ENSRNOG00000027707	Exd2	77	84.476	ENSETEG00000013803	EXD2	100	84.476	Echinops_telfairi
ENSRNOG00000027707	Exd2	74	45.049	ENSEBUG00000013264	exd2	87	45.243	Eptatretus_burgeri
ENSRNOG00000027707	Exd2	100	81.019	ENSEASG00005016586	EXD2	98	81.833	Equus_asinus_asinus
ENSRNOG00000027707	Exd2	98	81.505	ENSECAG00000019103	EXD2	83	82.343	Equus_caballus
ENSRNOG00000027707	Exd2	77	88.105	ENSEEUG00000007011	EXD2	100	88.105	Erinaceus_europaeus
ENSRNOG00000027707	Exd2	99	53.963	ENSELUG00000022318	exd2	99	53.293	Esox_lucius
ENSRNOG00000027707	Exd2	99	81.026	ENSFCAG00000014350	EXD2	98	81.043	Felis_catus
ENSRNOG00000027707	Exd2	100	63.735	ENSFALG00000005050	EXD2	100	63.735	Ficedula_albicollis
ENSRNOG00000027707	Exd2	100	80.710	ENSFDAG00000009719	EXD2	100	80.864	Fukomys_damarensis
ENSRNOG00000027707	Exd2	100	53.636	ENSFHEG00000010499	exd2	86	59.353	Fundulus_heteroclitus
ENSRNOG00000027707	Exd2	70	49.782	ENSGMOG00000005937	exd2	99	49.345	Gadus_morhua
ENSRNOG00000027707	Exd2	86	71.043	ENSGALG00000009456	EXD2	100	64.352	Gallus_gallus
ENSRNOG00000027707	Exd2	100	52.338	ENSGAFG00000017943	exd2	98	52.696	Gambusia_affinis
ENSRNOG00000027707	Exd2	79	60.194	ENSGACG00000005358	exd2	99	60.506	Gasterosteus_aculeatus
ENSRNOG00000027707	Exd2	100	64.724	ENSGAGG00000023895	EXD2	100	64.815	Gopherus_agassizii
ENSRNOG00000027707	Exd2	100	83.821	ENSGGOG00000001258	EXD2	100	83.359	Gorilla_gorilla
ENSRNOG00000027707	Exd2	100	51.813	ENSHBUG00000019366	exd2	86	58.378	Haplochromis_burtoni
ENSRNOG00000027707	Exd2	100	80.401	ENSHGLG00000008157	EXD2	100	80.710	Heterocephalus_glaber_female
ENSRNOG00000027707	Exd2	100	80.093	ENSHGLG00100003936	EXD2	100	80.401	Heterocephalus_glaber_male
ENSRNOG00000027707	Exd2	100	51.286	ENSHCOG00000018905	exd2	88	56.429	Hippocampus_comes
ENSRNOG00000027707	Exd2	100	55.083	ENSIPUG00000000560	exd2	100	54.407	Ictalurus_punctatus
ENSRNOG00000027707	Exd2	100	83.642	ENSSTOG00000000175	EXD2	100	83.642	Ictidomys_tridecemlineatus
ENSRNOG00000027707	Exd2	71	78.556	ENSJJAG00000021417	-	100	78.556	Jaculus_jaculus
ENSRNOG00000027707	Exd2	100	54.476	ENSKMAG00000016785	exd2	86	59.532	Kryptolebias_marmoratus
ENSRNOG00000027707	Exd2	100	52.338	ENSLBEG00000028400	exd2	86	58.007	Labrus_bergylta
ENSRNOG00000027707	Exd2	100	55.401	ENSLACG00000018609	EXD2	100	55.247	Latimeria_chalumnae
ENSRNOG00000027707	Exd2	100	57.143	ENSLOCG00000013376	exd2	100	56.528	Lepisosteus_oculatus
ENSRNOG00000027707	Exd2	100	81.019	ENSLAFG00000018508	EXD2	100	87.255	Loxodonta_africana
ENSRNOG00000027707	Exd2	100	82.743	ENSMFAG00000041413	EXD2	100	82.126	Macaca_fascicularis
ENSRNOG00000027707	Exd2	100	82.743	ENSMMUG00000020514	EXD2	100	82.126	Macaca_mulatta
ENSRNOG00000027707	Exd2	100	82.897	ENSMNEG00000038561	EXD2	100	82.280	Macaca_nemestrina
ENSRNOG00000027707	Exd2	100	83.051	ENSMLEG00000044130	EXD2	100	82.435	Mandrillus_leucophaeus
ENSRNOG00000027707	Exd2	100	52.870	ENSMAMG00000000136	exd2	86	58.929	Mastacembelus_armatus
ENSRNOG00000027707	Exd2	100	51.045	ENSMZEG00005011274	exd2	86	57.726	Maylandia_zebra
ENSRNOG00000027707	Exd2	87	70.232	ENSMGAG00000011874	EXD2	100	64.043	Meleagris_gallopavo
ENSRNOG00000027707	Exd2	100	73.364	ENSMICG00000009606	EXD2	100	73.212	Microcebus_murinus
ENSRNOG00000027707	Exd2	100	89.506	ENSMOCG00000019497	Exd2	100	89.506	Microtus_ochrogaster
ENSRNOG00000027707	Exd2	100	52.102	ENSMMOG00000000384	exd2	91	57.576	Mola_mola
ENSRNOG00000027707	Exd2	97	64.537	ENSMODG00000010228	EXD2	88	71.165	Monodelphis_domestica
ENSRNOG00000027707	Exd2	100	53.191	ENSMALG00000022371	exd2	86	59.173	Monopterus_albus
ENSRNOG00000027707	Exd2	100	92.923	ENSMUSG00000032705	Exd2	100	95.536	Mus_musculus
ENSRNOG00000027707	Exd2	100	90.741	MGP_PahariEiJ_G0029652	Exd2	100	90.741	Mus_pahari
ENSRNOG00000027707	Exd2	100	93.519	MGP_SPRETEiJ_G0018741	Exd2	100	93.673	Mus_spretus
ENSRNOG00000027707	Exd2	100	81.636	ENSMPUG00000007368	EXD2	98	81.517	Mustela_putorius_furo
ENSRNOG00000027707	Exd2	79	88.235	ENSMLUG00000011848	EXD2	100	88.235	Myotis_lucifugus
ENSRNOG00000027707	Exd2	100	52.280	ENSNBRG00000004615	exd2	91	57.876	Neolamprologus_brichardi
ENSRNOG00000027707	Exd2	100	83.667	ENSNLEG00000001275	EXD2	100	83.205	Nomascus_leucogenys
ENSRNOG00000027707	Exd2	77	86.694	ENSOPRG00000000078	EXD2	100	86.694	Ochotona_princeps
ENSRNOG00000027707	Exd2	100	80.093	ENSODEG00000014245	EXD2	100	80.093	Octodon_degus
ENSRNOG00000027707	Exd2	100	51.208	ENSONIG00000000385	exd2	87	57.522	Oreochromis_niloticus
ENSRNOG00000027707	Exd2	79	60.506	ENSOANG00000012621	EXD2	100	60.700	Ornithorhynchus_anatinus
ENSRNOG00000027707	Exd2	100	82.253	ENSOCUG00000006626	EXD2	100	82.099	Oryctolagus_cuniculus
ENSRNOG00000027707	Exd2	100	52.042	ENSORLG00000019790	exd2	86	58.770	Oryzias_latipes
ENSRNOG00000027707	Exd2	100	51.885	ENSORLG00020004434	exd2	86	58.590	Oryzias_latipes_hni
ENSRNOG00000027707	Exd2	100	51.735	ENSORLG00015001003	exd2	86	58.409	Oryzias_latipes_hsok
ENSRNOG00000027707	Exd2	100	52.752	ENSOMEG00000023552	exd2	85	58.791	Oryzias_melastigma
ENSRNOG00000027707	Exd2	100	80.401	ENSOGAG00000012059	EXD2	99	80.247	Otolemur_garnettii
ENSRNOG00000027707	Exd2	99	82.326	ENSOARG00000021181	EXD2	98	82.306	Ovis_aries
ENSRNOG00000027707	Exd2	100	84.129	ENSPPAG00000042293	EXD2	100	83.667	Pan_paniscus
ENSRNOG00000027707	Exd2	99	80.871	ENSPPRG00000002946	EXD2	98	80.885	Panthera_pardus
ENSRNOG00000027707	Exd2	99	80.871	ENSPTIG00000018876	EXD2	98	80.885	Panthera_tigris_altaica
ENSRNOG00000027707	Exd2	100	83.975	ENSPTRG00000006480	EXD2	100	89.113	Pan_troglodytes
ENSRNOG00000027707	Exd2	100	83.051	ENSPANG00000025013	EXD2	100	82.435	Papio_anubis
ENSRNOG00000027707	Exd2	99	52.558	ENSPKIG00000007907	exd2	99	53.333	Paramormyrops_kingsleyae
ENSRNOG00000027707	Exd2	100	62.191	ENSPSIG00000010111	EXD2	100	62.500	Pelodiscus_sinensis
ENSRNOG00000027707	Exd2	100	53.191	ENSPMGG00000021023	exd2	88	58.393	Periophthalmus_magnuspinnatus
ENSRNOG00000027707	Exd2	100	52.504	ENSPFOG00000004789	exd2	89	57.295	Poecilia_formosa
ENSRNOG00000027707	Exd2	100	52.352	ENSPLAG00000020798	exd2	86	57.734	Poecilia_latipinna
ENSRNOG00000027707	Exd2	100	52.331	ENSPMEG00000006063	exd2	86	57.398	Poecilia_mexicana
ENSRNOG00000027707	Exd2	100	52.090	ENSPREG00000008479	exd2	89	57.754	Poecilia_reticulata
ENSRNOG00000027707	Exd2	100	83.359	ENSPPYG00000005937	EXD2	100	82.897	Pongo_abelii
ENSRNOG00000027707	Exd2	77	87.298	ENSPCAG00000007242	EXD2	100	87.298	Procavia_capensis
ENSRNOG00000027707	Exd2	100	82.589	ENSPCOG00000028702	EXD2	99	81.510	Propithecus_coquereli
ENSRNOG00000027707	Exd2	77	87.903	ENSPVAG00000016901	EXD2	100	87.903	Pteropus_vampyrus
ENSRNOG00000027707	Exd2	100	51.729	ENSPNYG00000010343	exd2	86	58.602	Pundamilia_nyererei
ENSRNOG00000027707	Exd2	100	52.757	ENSPNAG00000009476	exd2	87	58.467	Pygocentrus_nattereri
ENSRNOG00000027707	Exd2	100	83.051	ENSRBIG00000031108	EXD2	100	82.435	Rhinopithecus_bieti
ENSRNOG00000027707	Exd2	100	83.051	ENSRROG00000033249	EXD2	100	82.435	Rhinopithecus_roxellana
ENSRNOG00000027707	Exd2	100	83.359	ENSSBOG00000035171	EXD2	100	82.897	Saimiri_boliviensis_boliviensis
ENSRNOG00000027707	Exd2	100	67.231	ENSSHAG00000005008	EXD2	100	67.231	Sarcophilus_harrisii
ENSRNOG00000027707	Exd2	100	53.799	ENSSFOG00015006470	exd2	100	54.463	Scleropages_formosus
ENSRNOG00000027707	Exd2	100	49.621	ENSSMAG00000009321	exd2	88	53.368	Scophthalmus_maximus
ENSRNOG00000027707	Exd2	100	53.976	ENSSDUG00000001321	exd2	91	59.964	Seriola_dumerili
ENSRNOG00000027707	Exd2	100	54.173	ENSSLDG00000011348	exd2	86	60.252	Seriola_lalandi_dorsalis
ENSRNOG00000027707	Exd2	66	86.290	ENSSARG00000012747	EXD2	87	86.290	Sorex_araneus
ENSRNOG00000027707	Exd2	79	70.000	ENSSPUG00000002120	EXD2	100	70.000	Sphenodon_punctatus
ENSRNOG00000027707	Exd2	100	54.312	ENSSPAG00000002512	exd2	85	60.107	Stegastes_partitus
ENSRNOG00000027707	Exd2	99	80.930	ENSSSCG00000002305	EXD2	95	87.647	Sus_scrofa
ENSRNOG00000027707	Exd2	100	64.815	ENSTGUG00000011469	EXD2	100	64.815	Taeniopygia_guttata
ENSRNOG00000027707	Exd2	100	53.364	ENSTRUG00000003672	exd2	92	57.686	Takifugu_rubripes
ENSRNOG00000027707	Exd2	85	56.600	ENSTNIG00000003046	exd2	100	56.781	Tetraodon_nigroviridis
ENSRNOG00000027707	Exd2	77	88.911	ENSTTRG00000013954	EXD2	100	88.911	Tursiops_truncatus
ENSRNOG00000027707	Exd2	100	81.944	ENSUAMG00000010774	EXD2	98	82.148	Ursus_americanus
ENSRNOG00000027707	Exd2	99	81.917	ENSUMAG00000010083	EXD2	98	82.120	Ursus_maritimus
ENSRNOG00000027707	Exd2	65	89.623	ENSVPAG00000005658	EXD2	100	89.623	Vicugna_pacos
ENSRNOG00000027707	Exd2	100	81.019	ENSVVUG00000003704	EXD2	97	81.359	Vulpes_vulpes
ENSRNOG00000027707	Exd2	99	58.578	ENSXETG00000017930	exd2	87	66.120	Xenopus_tropicalis
ENSRNOG00000027707	Exd2	58	54.856	ENSXCOG00000014338	exd2	63	56.021	Xiphophorus_couchianus
ENSRNOG00000027707	Exd2	100	53.577	ENSXMAG00000003565	exd2	87	58.834	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000724	double-strand break repair via homologous recombination	-	IEA	Process
GO:0000724	double-strand break repair via homologous recombination	-	ISO	Process
GO:0000729	DNA double-strand break processing	-	IEA	Process
GO:0000729	DNA double-strand break processing	-	ISO	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006302	double-strand break repair	-	ISO	Process
GO:0008310	single-stranded DNA 3'-5' exodeoxyribonuclease activity	-	IEA	Function
GO:0008310	single-stranded DNA 3'-5' exodeoxyribonuclease activity	-	ISO	Function
GO:0008408	3'-5' exonuclease activity	21873635.	IBA	Function
GO:0008408	3'-5' exonuclease activity	-	ISO	Function
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	ISO	Process