EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000028089 (Gene tree)
Gene ID: 498251
Gene Symbol: Apobec4
Alias: LOC498251
Full Name: apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 8047 bases
Position: chr13:70157522-70165568
Accession: 1560256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000034180	APOBEC_N	PF08210.11	1e-26	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000036906	-	1405	XM_008769666	ENSRNOP00000034180	388 (aa)	XP_008767888	Q6AXX9

Gene Model

Click here to download ENSRNOG00000028089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000028089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000028089	Apobec4	91	62.327	ENSG00000173627	APOBEC4	100	62.060	Homo_sapiens
ENSRNOG00000028089	Apobec4	91	65.097	ENSAMEG00000002503	APOBEC4	97	64.960	Ailuropoda_melanoleuca
ENSRNOG00000028089	Apobec4	88	49.300	ENSACAG00000015192	APOBEC4	98	49.300	Anolis_carolinensis
ENSRNOG00000028089	Apobec4	87	66.379	ENSBTAG00000047395	APOBEC4	99	64.674	Bos_taurus
ENSRNOG00000028089	Apobec4	91	60.388	ENSCJAG00000040026	APOBEC4	99	59.730	Callithrix_jacchus
ENSRNOG00000028089	Apobec4	91	63.158	ENSCAFG00000013349	APOBEC4	100	62.873	Canis_familiaris
ENSRNOG00000028089	Apobec4	91	63.158	ENSCAFG00020015526	APOBEC4	100	62.873	Canis_lupus_dingo
ENSRNOG00000028089	Apobec4	87	65.882	ENSCHIG00000011987	APOBEC4	96	64.011	Capra_hircus
ENSRNOG00000028089	Apobec4	91	61.236	ENSCSAG00000000243	APOBEC4	100	60.548	Chlorocebus_sabaeus
ENSRNOG00000028089	Apobec4	93	61.789	ENSCHOG00000012387	APOBEC4	100	61.789	Choloepus_hoffmanni
ENSRNOG00000028089	Apobec4	95	47.074	ENSCPBG00000015714	APOBEC4	99	47.074	Chrysemys_picta_bellii
ENSRNOG00000028089	Apobec4	86	71.045	ENSCGRG00001004553	Apobec4	96	71.045	Cricetulus_griseus_chok1gshd
ENSRNOG00000028089	Apobec4	87	64.368	ENSDNOG00000044664	APOBEC4	100	61.892	Dasypus_novemcinctus
ENSRNOG00000028089	Apobec4	91	62.040	ENSDORG00000007335	Apobec4	99	62.040	Dipodomys_ordii
ENSRNOG00000028089	Apobec4	91	64.543	ENSEASG00005006513	APOBEC4	99	63.784	Equus_asinus_asinus
ENSRNOG00000028089	Apobec4	91	64.820	ENSECAG00000019734	APOBEC4	99	64.054	Equus_caballus
ENSRNOG00000028089	Apobec4	91	64.266	ENSFCAG00000010909	APOBEC4	100	63.514	Felis_catus
ENSRNOG00000028089	Apobec4	79	67.516	ENSFDAG00000018185	APOBEC4	98	67.516	Fukomys_damarensis
ENSRNOG00000028089	Apobec4	80	49.688	ENSGALG00000053078	APOBEC4	91	49.688	Gallus_gallus
ENSRNOG00000028089	Apobec4	91	62.050	ENSGGOG00000042217	APOBEC4	100	61.351	Gorilla_gorilla
ENSRNOG00000028089	Apobec4	91	45.983	ENSLACG00000014504	APOBEC4	99	45.983	Latimeria_chalumnae
ENSRNOG00000028089	Apobec4	60	35.622	ENSLOCG00000010326	-	94	35.271	Lepisosteus_oculatus
ENSRNOG00000028089	Apobec4	91	61.517	ENSMMUG00000031303	APOBEC4	100	60.822	Macaca_mulatta
ENSRNOG00000028089	Apobec4	80	47.205	ENSMGAG00000017190	APOBEC4	94	47.205	Meleagris_gallopavo
ENSRNOG00000028089	Apobec4	97	78.133	MGP_CAROLIEiJ_G0014701	Apobec4	100	78.133	Mus_caroli
ENSRNOG00000028089	Apobec4	97	76.800	ENSMUSG00000055547	Apobec4	100	76.800	Mus_musculus
ENSRNOG00000028089	Apobec4	97	75.467	MGP_PahariEiJ_G0027937	Apobec4	100	75.467	Mus_pahari
ENSRNOG00000028089	Apobec4	97	75.733	MGP_SPRETEiJ_G0015508	Apobec4	100	75.733	Mus_spretus
ENSRNOG00000028089	Apobec4	87	66.181	ENSMPUG00000011756	APOBEC4	100	63.271	Mustela_putorius_furo
ENSRNOG00000028089	Apobec4	89	61.798	ENSMLUG00000002458	APOBEC4	100	60.270	Myotis_lucifugus
ENSRNOG00000028089	Apobec4	90	59.829	ENSNGAG00000017599	Apobec4	100	59.722	Nannospalax_galili
ENSRNOG00000028089	Apobec4	91	62.050	ENSNLEG00000035610	APOBEC4	100	61.351	Nomascus_leucogenys
ENSRNOG00000028089	Apobec4	82	65.312	ENSODEG00000009778	APOBEC4	96	64.438	Octodon_degus
ENSRNOG00000028089	Apobec4	88	52.000	ENSOANG00000001000	APOBEC4	99	50.136	Ornithorhynchus_anatinus
ENSRNOG00000028089	Apobec4	91	65.097	ENSOGAG00000003118	APOBEC4	99	64.499	Otolemur_garnettii
ENSRNOG00000028089	Apobec4	87	64.943	ENSOARG00000005287	APOBEC4	99	63.315	Ovis_aries
ENSRNOG00000028089	Apobec4	91	61.127	ENSPPAG00000038272	APOBEC4	100	60.882	Pan_paniscus
ENSRNOG00000028089	Apobec4	91	63.989	ENSPPRG00000014706	APOBEC4	100	63.243	Panthera_pardus
ENSRNOG00000028089	Apobec4	91	63.712	ENSPTIG00000005518	APOBEC4	100	62.973	Panthera_tigris_altaica
ENSRNOG00000028089	Apobec4	91	61.219	ENSPTRG00000047181	APOBEC4	100	60.976	Pan_troglodytes
ENSRNOG00000028089	Apobec4	89	73.775	ENSPEMG00000019164	Apobec4	100	73.333	Peromyscus_maniculatus_bairdii
ENSRNOG00000028089	Apobec4	55	35.000	ENSPMAG00000006156	APOBEC4	64	35.000	Petromyzon_marinus
ENSRNOG00000028089	Apobec4	87	57.941	ENSPCIG00000003817	APOBEC4	99	55.014	Phascolarctos_cinereus
ENSRNOG00000028089	Apobec4	91	61.496	ENSPPYG00000000424	APOBEC4	100	60.811	Pongo_abelii
ENSRNOG00000028089	Apobec4	90	47.922	ENSPCAG00000015174	APOBEC4	100	47.297	Procavia_capensis
ENSRNOG00000028089	Apobec4	91	64.266	ENSPVAG00000001100	APOBEC4	100	63.957	Pteropus_vampyrus
ENSRNOG00000028089	Apobec4	87	53.429	ENSSHAG00000013804	APOBEC4	100	51.344	Sarcophilus_harrisii
ENSRNOG00000028089	Apobec4	93	46.429	ENSSPUG00000010884	APOBEC4	97	46.429	Sphenodon_punctatus
ENSRNOG00000028089	Apobec4	93	63.587	ENSSSCG00000015561	APOBEC4	100	63.587	Sus_scrofa
ENSRNOG00000028089	Apobec4	91	61.219	ENSTBEG00000006476	APOBEC4	100	60.976	Tupaia_belangeri
ENSRNOG00000028089	Apobec4	90	63.611	ENSTTRG00000014784	APOBEC4	99	63.043	Tursiops_truncatus
ENSRNOG00000028089	Apobec4	87	65.805	ENSUAMG00000005088	APOBEC4	100	63.957	Ursus_americanus
ENSRNOG00000028089	Apobec4	87	65.805	ENSUMAG00000016285	APOBEC4	100	63.957	Ursus_maritimus
ENSRNOG00000028089	Apobec4	91	63.158	ENSVVUG00000009054	APOBEC4	100	62.432	Vulpes_vulpes
ENSRNOG00000028089	Apobec4	94	39.130	ENSXETG00000017441	apobec4	97	39.130	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0006397	mRNA processing	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function