EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000028328 (Gene tree)
Gene ID: 499731
Gene Symbol: Tyw3
Alias: LOC499731|RGD1559623
Full Name: tRNA-yW synthesizing protein 3 homolog
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 22660 bases
Position: chr2:260861790-260884449
Accession: 1559623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000037831	TYW3	PF02676.14	7.9e-57	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000032874	-	1353	XM_006233529	ENSRNOP00000037831	293 (aa)	XP_001080203	D3ZHR8

Gene Model

Click here to download ENSRNOG00000028328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000028328's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000028328	Tyw3	76	77.477	ENSG00000162623	TYW3	100	87.500	Homo_sapiens
ENSRNOG00000028328	Tyw3	75	58.590	ENSAPOG00000009462	tyw3	85	58.590	Acanthochromis_polyacanthus
ENSRNOG00000028328	Tyw3	88	69.884	ENSAMEG00000003461	TYW3	99	69.884	Ailuropoda_melanoleuca
ENSRNOG00000028328	Tyw3	64	65.775	ENSACIG00000002242	tyw3	92	59.633	Amphilophus_citrinellus
ENSRNOG00000028328	Tyw3	67	62.564	ENSAOCG00000002161	tyw3	73	62.564	Amphiprion_ocellaris
ENSRNOG00000028328	Tyw3	58	52.663	ENSAPEG00000009395	tyw3	92	62.366	Amphiprion_percula
ENSRNOG00000028328	Tyw3	61	65.363	ENSATEG00000004518	tyw3	76	65.363	Anabas_testudineus
ENSRNOG00000028328	Tyw3	61	65.363	ENSATEG00000004411	-	76	65.363	Anabas_testudineus
ENSRNOG00000028328	Tyw3	76	58.298	ENSACAG00000011380	TYW3	87	58.298	Anolis_carolinensis
ENSRNOG00000028328	Tyw3	88	70.930	ENSANAG00000034485	TYW3	99	70.930	Aotus_nancymaae
ENSRNOG00000028328	Tyw3	62	64.865	ENSACLG00000022833	tyw3	77	64.865	Astatotilapia_calliptera
ENSRNOG00000028328	Tyw3	70	59.314	ENSAMXG00000039965	tyw3	80	59.314	Astyanax_mexicanus
ENSRNOG00000028328	Tyw3	88	69.112	ENSBTAG00000005196	TYW3	99	69.112	Bos_taurus
ENSRNOG00000028328	Tyw3	88	71.984	ENSCJAG00000006550	TYW3	99	71.984	Callithrix_jacchus
ENSRNOG00000028328	Tyw3	73	67.907	ENSCAFG00000032209	TYW3	99	67.907	Canis_familiaris
ENSRNOG00000028328	Tyw3	87	70.155	ENSCAFG00020017095	TYW3	92	70.155	Canis_lupus_dingo
ENSRNOG00000028328	Tyw3	88	70.656	ENSCHIG00000009333	TYW3	99	70.656	Capra_hircus
ENSRNOG00000028328	Tyw3	80	69.231	ENSTSYG00000006369	TYW3	94	69.231	Carlito_syrichta
ENSRNOG00000028328	Tyw3	88	72.201	ENSCCAG00000034210	TYW3	99	72.093	Cebus_capucinus
ENSRNOG00000028328	Tyw3	87	72.047	ENSCATG00000044397	TYW3	98	72.047	Cercocebus_atys
ENSRNOG00000028328	Tyw3	88	72.308	ENSCLAG00000004370	TYW3	95	72.308	Chinchilla_lanigera
ENSRNOG00000028328	Tyw3	87	72.047	ENSCSAG00000001387	TYW3	98	72.047	Chlorocebus_sabaeus
ENSRNOG00000028328	Tyw3	63	79.661	ENSCHOG00000005179	TYW3	72	79.661	Choloepus_hoffmanni
ENSRNOG00000028328	Tyw3	79	61.224	ENSCPBG00000017047	TYW3	96	61.224	Chrysemys_picta_bellii
ENSRNOG00000028328	Tyw3	87	70.866	ENSCANG00000036108	TYW3	98	70.866	Colobus_angolensis_palliatus
ENSRNOG00000028328	Tyw3	88	80.620	ENSCGRG00001022820	Tyw3	100	86.111	Cricetulus_griseus_chok1gshd
ENSRNOG00000028328	Tyw3	68	78.500	ENSCGRG00000003132	Tyw3	100	84.884	Cricetulus_griseus_crigri
ENSRNOG00000028328	Tyw3	69	62.069	ENSCSEG00000021219	tyw3	72	62.069	Cynoglossus_semilaevis
ENSRNOG00000028328	Tyw3	68	62.121	ENSCVAG00000003270	tyw3	80	62.121	Cyprinodon_variegatus
ENSRNOG00000028328	Tyw3	85	50.201	ENSDARG00000038222	tyw3	98	50.201	Danio_rerio
ENSRNOG00000028328	Tyw3	86	70.751	ENSDNOG00000033863	TYW3	98	70.751	Dasypus_novemcinctus
ENSRNOG00000028328	Tyw3	67	67.692	ENSETEG00000012572	TYW3	98	67.692	Echinops_telfairi
ENSRNOG00000028328	Tyw3	88	71.538	ENSEASG00005007776	TYW3	99	71.538	Equus_asinus_asinus
ENSRNOG00000028328	Tyw3	88	71.538	ENSECAG00000007888	TYW3	99	71.538	Equus_caballus
ENSRNOG00000028328	Tyw3	87	58.594	ENSEEUG00000009289	TYW3	98	58.594	Erinaceus_europaeus
ENSRNOG00000028328	Tyw3	77	58.150	ENSELUG00000023000	tyw3	91	58.150	Esox_lucius
ENSRNOG00000028328	Tyw3	88	71.815	ENSFCAG00000035340	TYW3	99	71.815	Felis_catus
ENSRNOG00000028328	Tyw3	77	77.093	ENSFDAG00000003816	TYW3	99	70.155	Fukomys_damarensis
ENSRNOG00000028328	Tyw3	67	61.929	ENSFHEG00000001347	tyw3	79	61.929	Fundulus_heteroclitus
ENSRNOG00000028328	Tyw3	82	55.061	ENSGALG00000032549	TYW3	94	55.061	Gallus_gallus
ENSRNOG00000028328	Tyw3	68	63.000	ENSGAFG00000012457	tyw3	75	63.000	Gambusia_affinis
ENSRNOG00000028328	Tyw3	67	62.564	ENSGACG00000014630	tyw3	86	62.564	Gasterosteus_aculeatus
ENSRNOG00000028328	Tyw3	76	76.577	ENSGGOG00000013676	TYW3	99	69.498	Gorilla_gorilla
ENSRNOG00000028328	Tyw3	88	71.318	ENSHGLG00000004440	TYW3	99	71.318	Heterocephalus_glaber_female
ENSRNOG00000028328	Tyw3	88	67.829	ENSHGLG00100018315	TYW3	99	67.829	Heterocephalus_glaber_male
ENSRNOG00000028328	Tyw3	69	54.455	ENSHCOG00000016590	TYW3	98	54.455	Hippocampus_comes
ENSRNOG00000028328	Tyw3	73	57.477	ENSIPUG00000012907	tyw3	67	61.809	Ictalurus_punctatus
ENSRNOG00000028328	Tyw3	89	63.258	ENSSTOG00000028816	TYW3	96	63.258	Ictidomys_tridecemlineatus
ENSRNOG00000028328	Tyw3	66	65.285	ENSKMAG00000020761	tyw3	70	65.285	Kryptolebias_marmoratus
ENSRNOG00000028328	Tyw3	61	63.128	ENSLBEG00000021318	tyw3	92	53.478	Labrus_bergylta
ENSRNOG00000028328	Tyw3	88	52.918	ENSLACG00000012636	TYW3	99	52.918	Latimeria_chalumnae
ENSRNOG00000028328	Tyw3	87	54.086	ENSLOCG00000003437	tyw3	100	54.086	Lepisosteus_oculatus
ENSRNOG00000028328	Tyw3	80	72.961	ENSLAFG00000011373	TYW3	98	69.291	Loxodonta_africana
ENSRNOG00000028328	Tyw3	87	71.260	ENSMFAG00000003496	TYW3	98	71.260	Macaca_fascicularis
ENSRNOG00000028328	Tyw3	87	62.205	ENSMMUG00000014595	TYW3	98	62.205	Macaca_mulatta
ENSRNOG00000028328	Tyw3	87	71.260	ENSMNEG00000028346	TYW3	98	71.260	Macaca_nemestrina
ENSRNOG00000028328	Tyw3	87	72.047	ENSMLEG00000041647	TYW3	98	72.047	Mandrillus_leucophaeus
ENSRNOG00000028328	Tyw3	69	63.184	ENSMAMG00000010987	tyw3	76	63.184	Mastacembelus_armatus
ENSRNOG00000028328	Tyw3	73	60.563	ENSMZEG00005023808	tyw3	75	63.184	Maylandia_zebra
ENSRNOG00000028328	Tyw3	88	53.488	ENSMAUG00000000522	Tyw3	99	80.233	Mesocricetus_auratus
ENSRNOG00000028328	Tyw3	88	75.479	ENSMICG00000015883	TYW3	97	75.479	Microcebus_murinus
ENSRNOG00000028328	Tyw3	72	80.147	ENSMOCG00000021348	Tyw3	97	80.147	Microtus_ochrogaster
ENSRNOG00000028328	Tyw3	77	57.269	ENSMMOG00000021442	tyw3	89	57.269	Mola_mola
ENSRNOG00000028328	Tyw3	91	62.222	ENSMODG00000019082	TYW3	92	62.222	Monodelphis_domestica
ENSRNOG00000028328	Tyw3	76	56.667	ENSMALG00000014442	tyw3	90	56.667	Monopterus_albus
ENSRNOG00000028328	Tyw3	88	89.147	MGP_CAROLIEiJ_G0025755	Tyw3	100	93.056	Mus_caroli
ENSRNOG00000028328	Tyw3	88	88.760	ENSMUSG00000047583	Tyw3	100	93.750	Mus_musculus
ENSRNOG00000028328	Tyw3	88	89.535	MGP_PahariEiJ_G0027206	Tyw3	100	93.056	Mus_pahari
ENSRNOG00000028328	Tyw3	88	88.372	MGP_SPRETEiJ_G0026708	Tyw3	100	93.056	Mus_spretus
ENSRNOG00000028328	Tyw3	80	76.170	ENSMPUG00000010967	TYW3	99	72.201	Mustela_putorius_furo
ENSRNOG00000028328	Tyw3	88	70.270	ENSMLUG00000005999	TYW3	99	70.270	Myotis_lucifugus
ENSRNOG00000028328	Tyw3	88	71.595	ENSNLEG00000009556	TYW3	99	71.595	Nomascus_leucogenys
ENSRNOG00000028328	Tyw3	88	51.923	ENSOPRG00000014182	TYW3	99	51.923	Ochotona_princeps
ENSRNOG00000028328	Tyw3	88	70.543	ENSODEG00000005361	TYW3	100	78.621	Octodon_degus
ENSRNOG00000028328	Tyw3	68	63.317	ENSONIG00000019965	tyw3	100	63.317	Oreochromis_niloticus
ENSRNOG00000028328	Tyw3	65	56.021	ENSOANG00000002172	-	95	56.021	Ornithorhynchus_anatinus
ENSRNOG00000028328	Tyw3	88	69.380	ENSOCUG00000003043	TYW3	99	69.380	Oryctolagus_cuniculus
ENSRNOG00000028328	Tyw3	75	57.991	ENSORLG00000004470	tyw3	84	57.991	Oryzias_latipes
ENSRNOG00000028328	Tyw3	75	57.534	ENSORLG00020003793	tyw3	84	57.534	Oryzias_latipes_hni
ENSRNOG00000028328	Tyw3	75	57.991	ENSORLG00015006950	tyw3	84	57.991	Oryzias_latipes_hsok
ENSRNOG00000028328	Tyw3	79	54.132	ENSOMEG00000016176	tyw3	89	61.111	Oryzias_melastigma
ENSRNOG00000028328	Tyw3	88	70.930	ENSOGAG00000011590	-	99	70.930	Otolemur_garnettii
ENSRNOG00000028328	Tyw3	77	70.386	ENSOGAG00000025029	-	99	65.019	Otolemur_garnettii
ENSRNOG00000028328	Tyw3	88	69.884	ENSOARG00000012508	TYW3	99	69.884	Ovis_aries
ENSRNOG00000028328	Tyw3	76	77.027	ENSPPAG00000043438	TYW3	99	69.884	Pan_paniscus
ENSRNOG00000028328	Tyw3	88	72.374	ENSPPRG00000023209	TYW3	99	72.374	Panthera_pardus
ENSRNOG00000028328	Tyw3	88	71.429	ENSPTIG00000017448	TYW3	99	71.429	Panthera_tigris_altaica
ENSRNOG00000028328	Tyw3	76	77.027	ENSPTRG00000000867	TYW3	99	69.884	Pan_troglodytes
ENSRNOG00000028328	Tyw3	87	72.047	ENSPANG00000013397	TYW3	98	72.047	Papio_anubis
ENSRNOG00000028328	Tyw3	79	48.106	ENSPKIG00000009802	tyw3	95	48.106	Paramormyrops_kingsleyae
ENSRNOG00000028328	Tyw3	55	64.815	ENSPSIG00000008432	TYW3	94	64.815	Pelodiscus_sinensis
ENSRNOG00000028328	Tyw3	65	61.579	ENSPMGG00000005290	tyw3	79	57.923	Periophthalmus_magnuspinnatus
ENSRNOG00000028328	Tyw3	88	84.496	ENSPEMG00000013100	Tyw3	100	90.972	Peromyscus_maniculatus_bairdii
ENSRNOG00000028328	Tyw3	77	73.009	ENSPCIG00000024204	TYW3	75	73.009	Phascolarctos_cinereus
ENSRNOG00000028328	Tyw3	77	59.389	ENSPFOG00000000927	tyw3	85	59.389	Poecilia_formosa
ENSRNOG00000028328	Tyw3	68	64.824	ENSPLAG00000009891	tyw3	74	64.824	Poecilia_latipinna
ENSRNOG00000028328	Tyw3	77	59.389	ENSPMEG00000002006	tyw3	82	65.000	Poecilia_mexicana
ENSRNOG00000028328	Tyw3	68	62.814	ENSPREG00000012341	tyw3	74	62.814	Poecilia_reticulata
ENSRNOG00000028328	Tyw3	88	70.428	ENSPPYG00000001234	TYW3	99	70.428	Pongo_abelii
ENSRNOG00000028328	Tyw3	88	68.482	ENSPCAG00000000524	TYW3	99	68.482	Procavia_capensis
ENSRNOG00000028328	Tyw3	81	79.325	ENSPCOG00000023207	TYW3	98	74.905	Propithecus_coquereli
ENSRNOG00000028328	Tyw3	66	80.928	ENSPVAG00000002356	TYW3	99	68.872	Pteropus_vampyrus
ENSRNOG00000028328	Tyw3	64	64.398	ENSPNYG00000017982	tyw3	60	64.398	Pundamilia_nyererei
ENSRNOG00000028328	Tyw3	76	56.696	ENSPNAG00000028431	tyw3	87	56.696	Pygocentrus_nattereri
ENSRNOG00000028328	Tyw3	87	70.079	ENSRROG00000034171	TYW3	98	70.079	Rhinopithecus_roxellana
ENSRNOG00000028328	Tyw3	61	31.455	YGL050W	-	86	30.612	Saccharomyces_cerevisiae
ENSRNOG00000028328	Tyw3	88	71.206	ENSSBOG00000022917	TYW3	99	71.206	Saimiri_boliviensis_boliviensis
ENSRNOG00000028328	Tyw3	86	51.953	ENSSFOG00015021842	tyw3	99	51.953	Scleropages_formosus
ENSRNOG00000028328	Tyw3	70	61.765	ENSSMAG00000019609	tyw3	80	61.765	Scophthalmus_maximus
ENSRNOG00000028328	Tyw3	67	65.128	ENSSDUG00000003674	tyw3	73	65.128	Seriola_dumerili
ENSRNOG00000028328	Tyw3	67	65.128	ENSSLDG00000010425	tyw3	73	65.128	Seriola_lalandi_dorsalis
ENSRNOG00000028328	Tyw3	67	65.152	ENSSARG00000001097	TYW3	99	65.152	Sorex_araneus
ENSRNOG00000028328	Tyw3	72	63.721	ENSSPUG00000007880	TYW3	93	60.251	Sphenodon_punctatus
ENSRNOG00000028328	Tyw3	67	64.286	ENSSPAG00000013786	tyw3	71	64.615	Stegastes_partitus
ENSRNOG00000028328	Tyw3	88	67.433	ENSSSCG00000003779	TYW3	99	67.433	Sus_scrofa
ENSRNOG00000028328	Tyw3	75	56.904	ENSTRUG00000023563	tyw3	89	56.904	Takifugu_rubripes
ENSRNOG00000028328	Tyw3	65	63.158	ENSTNIG00000003368	tyw3	96	63.158	Tetraodon_nigroviridis
ENSRNOG00000028328	Tyw3	88	73.256	ENSTBEG00000017002	TYW3	99	73.256	Tupaia_belangeri
ENSRNOG00000028328	Tyw3	88	71.648	ENSTTRG00000010464	TYW3	99	71.648	Tursiops_truncatus
ENSRNOG00000028328	Tyw3	86	70.866	ENSUAMG00000010803	TYW3	100	70.866	Ursus_americanus
ENSRNOG00000028328	Tyw3	85	71.429	ENSUMAG00000006460	TYW3	98	71.429	Ursus_maritimus
ENSRNOG00000028328	Tyw3	63	83.243	ENSVPAG00000006900	TYW3	99	83.243	Vicugna_pacos
ENSRNOG00000028328	Tyw3	87	69.767	ENSVVUG00000006902	TYW3	92	69.767	Vulpes_vulpes
ENSRNOG00000028328	Tyw3	68	64.141	ENSXETG00000002996	tyw3	79	64.141	Xenopus_tropicalis
ENSRNOG00000028328	Tyw3	64	65.079	ENSXCOG00000000715	tyw3	73	65.079	Xiphophorus_couchianus
ENSRNOG00000028328	Tyw3	64	65.079	ENSXMAG00000006464	tyw3	76	65.079	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0008175	tRNA methyltransferase activity	21873635.	IBA	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process
GO:0031591	wybutosine biosynthetic process	21873635.	IBA	Process