EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000028341 (Gene tree)
Gene ID: 303193
Gene Symbol: Alkbh5
Alias: LOC303193|RGD1309496
Full Name: alkB homolog 5%2C RNA demethylase
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 24465 bases
Position: chr10:46906115-46930579
Accession: 1309496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000034155	2OG-FeII_Oxy_2	PF13532.6	8e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000034006	-	4774	-	ENSRNOP00000034155	395 (aa)	-	D3ZKD3

Gene Model

Click here to download ENSRNOG00000028341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000028341's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000028341	Alkbh5	100	97.468	ENSG00000091542	ALKBH5	100	97.468	Homo_sapiens
ENSRNOG00000028341	Alkbh5	99	64.051	ENSAPOG00000009959	alkbh5	99	63.591	Acanthochromis_polyacanthus
ENSRNOG00000028341	Alkbh5	89	96.581	ENSAMEG00000004956	ALKBH5	97	96.581	Ailuropoda_melanoleuca
ENSRNOG00000028341	Alkbh5	99	64.051	ENSACIG00000017828	alkbh5	99	63.910	Amphilophus_citrinellus
ENSRNOG00000028341	Alkbh5	99	64.213	ENSAOCG00000022195	alkbh5	99	64.467	Amphiprion_ocellaris
ENSRNOG00000028341	Alkbh5	99	63.706	ENSAPEG00000022697	alkbh5	99	63.959	Amphiprion_percula
ENSRNOG00000028341	Alkbh5	99	63.706	ENSATEG00000007186	alkbh5	99	63.544	Anabas_testudineus
ENSRNOG00000028341	Alkbh5	99	77.114	ENSACAG00000009646	ALKBH5	99	77.750	Anolis_carolinensis
ENSRNOG00000028341	Alkbh5	100	97.215	ENSANAG00000032817	ALKBH5	100	97.215	Aotus_nancymaae
ENSRNOG00000028341	Alkbh5	99	63.706	ENSACLG00000002713	alkbh5	99	63.198	Astatotilapia_calliptera
ENSRNOG00000028341	Alkbh5	99	63.910	ENSAMXG00000037092	alkbh5	99	62.624	Astyanax_mexicanus
ENSRNOG00000028341	Alkbh5	100	94.430	ENSBTAG00000025046	ALKBH5	100	94.684	Bos_taurus
ENSRNOG00000028341	Alkbh5	100	96.709	ENSCJAG00000000974	-	100	96.709	Callithrix_jacchus
ENSRNOG00000028341	Alkbh5	100	93.418	ENSCJAG00000046984	-	100	93.418	Callithrix_jacchus
ENSRNOG00000028341	Alkbh5	98	96.658	ENSCAFG00000018315	ALKBH5	91	95.443	Canis_familiaris
ENSRNOG00000028341	Alkbh5	100	96.962	ENSCAFG00020021061	ALKBH5	100	96.962	Canis_lupus_dingo
ENSRNOG00000028341	Alkbh5	100	94.937	ENSCHIG00000027248	ALKBH5	100	94.937	Capra_hircus
ENSRNOG00000028341	Alkbh5	59	97.863	ENSTSYG00000012134	ALKBH5	91	97.863	Carlito_syrichta
ENSRNOG00000028341	Alkbh5	100	97.215	ENSCPOG00000037709	ALKBH5	100	97.215	Cavia_porcellus
ENSRNOG00000028341	Alkbh5	100	96.962	ENSCCAG00000020369	ALKBH5	100	96.962	Cebus_capucinus
ENSRNOG00000028341	Alkbh5	100	91.646	ENSCATG00000041372	ALKBH5	100	91.646	Cercocebus_atys
ENSRNOG00000028341	Alkbh5	100	93.924	ENSCLAG00000003812	ALKBH5	100	93.924	Chinchilla_lanigera
ENSRNOG00000028341	Alkbh5	100	97.468	ENSCSAG00000008183	ALKBH5	100	97.468	Chlorocebus_sabaeus
ENSRNOG00000028341	Alkbh5	99	80.000	ENSCPBG00000020984	ALKBH5	99	79.653	Chrysemys_picta_bellii
ENSRNOG00000028341	Alkbh5	100	93.924	ENSCANG00000033849	ALKBH5	100	93.418	Colobus_angolensis_palliatus
ENSRNOG00000028341	Alkbh5	100	98.481	ENSCGRG00001004268	Alkbh5	100	98.481	Cricetulus_griseus_chok1gshd
ENSRNOG00000028341	Alkbh5	99	63.636	ENSCSEG00000002327	alkbh5	99	63.544	Cynoglossus_semilaevis
ENSRNOG00000028341	Alkbh5	99	64.213	ENSCVAG00000022772	alkbh5	99	64.213	Cyprinodon_variegatus
ENSRNOG00000028341	Alkbh5	99	65.491	ENSDARG00000063003	alkbh5	99	65.239	Danio_rerio
ENSRNOG00000028341	Alkbh5	85	97.033	ENSDNOG00000007935	ALKBH5	100	97.033	Dasypus_novemcinctus
ENSRNOG00000028341	Alkbh5	100	96.709	ENSEASG00005017626	ALKBH5	100	96.709	Equus_asinus_asinus
ENSRNOG00000028341	Alkbh5	100	96.962	ENSECAG00000018358	ALKBH5	100	96.962	Equus_caballus
ENSRNOG00000028341	Alkbh5	98	91.003	ENSEEUG00000010618	ALKBH5	87	90.769	Erinaceus_europaeus
ENSRNOG00000028341	Alkbh5	99	64.467	ENSELUG00000016444	alkbh5	99	64.975	Esox_lucius
ENSRNOG00000028341	Alkbh5	100	96.709	ENSFCAG00000033826	ALKBH5	100	96.709	Felis_catus
ENSRNOG00000028341	Alkbh5	86	85.294	ENSFALG00000013746	ALKBH5	95	86.176	Ficedula_albicollis
ENSRNOG00000028341	Alkbh5	100	87.595	ENSFDAG00000011356	ALKBH5	100	87.595	Fukomys_damarensis
ENSRNOG00000028341	Alkbh5	85	66.369	ENSFHEG00000017211	alkbh5	88	64.776	Fundulus_heteroclitus
ENSRNOG00000028341	Alkbh5	99	61.809	ENSGMOG00000007690	alkbh5	99	60.298	Gadus_morhua
ENSRNOG00000028341	Alkbh5	99	78.228	ENSGALG00000043693	ALKBH5	99	79.494	Gallus_gallus
ENSRNOG00000028341	Alkbh5	99	63.452	ENSGAFG00000013091	alkbh5	94	63.291	Gambusia_affinis
ENSRNOG00000028341	Alkbh5	99	61.013	ENSGACG00000016621	alkbh5	99	60.759	Gasterosteus_aculeatus
ENSRNOG00000028341	Alkbh5	99	81.061	ENSGAGG00000007453	ALKBH5	99	80.100	Gopherus_agassizii
ENSRNOG00000028341	Alkbh5	99	97.442	ENSGGOG00000016223	ALKBH5	100	97.442	Gorilla_gorilla
ENSRNOG00000028341	Alkbh5	99	63.959	ENSHBUG00000018324	alkbh5	99	63.452	Haplochromis_burtoni
ENSRNOG00000028341	Alkbh5	83	98.165	ENSHGLG00000013317	-	100	98.165	Heterocephalus_glaber_female
ENSRNOG00000028341	Alkbh5	100	89.620	ENSHGLG00100008720	-	100	89.620	Heterocephalus_glaber_male
ENSRNOG00000028341	Alkbh5	99	59.898	ENSHCOG00000010816	alkbh5	99	60.253	Hippocampus_comes
ENSRNOG00000028341	Alkbh5	100	96.709	ENSSTOG00000024574	ALKBH5	100	96.709	Ictidomys_tridecemlineatus
ENSRNOG00000028341	Alkbh5	99	62.944	ENSKMAG00000008615	alkbh5	99	62.879	Kryptolebias_marmoratus
ENSRNOG00000028341	Alkbh5	99	61.578	ENSLBEG00000007886	alkbh5	99	60.804	Labrus_bergylta
ENSRNOG00000028341	Alkbh5	98	70.663	ENSLOCG00000005006	alkbh5	83	77.326	Lepisosteus_oculatus
ENSRNOG00000028341	Alkbh5	100	95.696	ENSLAFG00000015521	ALKBH5	100	95.696	Loxodonta_africana
ENSRNOG00000028341	Alkbh5	100	97.468	ENSMFAG00000001517	ALKBH5	100	97.468	Macaca_fascicularis
ENSRNOG00000028341	Alkbh5	100	97.468	ENSMNEG00000037007	ALKBH5	100	97.468	Macaca_nemestrina
ENSRNOG00000028341	Alkbh5	88	97.118	ENSMLEG00000036607	ALKBH5	100	97.118	Mandrillus_leucophaeus
ENSRNOG00000028341	Alkbh5	99	63.384	ENSMAMG00000007695	alkbh5	99	63.038	Mastacembelus_armatus
ENSRNOG00000028341	Alkbh5	99	63.706	ENSMZEG00005012673	alkbh5	99	63.198	Maylandia_zebra
ENSRNOG00000028341	Alkbh5	100	97.975	ENSMAUG00000012991	Alkbh5	100	97.975	Mesocricetus_auratus
ENSRNOG00000028341	Alkbh5	100	97.215	ENSMICG00000044316	ALKBH5	100	97.215	Microcebus_murinus
ENSRNOG00000028341	Alkbh5	100	98.734	ENSMOCG00000002615	Alkbh5	100	98.734	Microtus_ochrogaster
ENSRNOG00000028341	Alkbh5	99	61.558	ENSMMOG00000020265	alkbh5	99	62.095	Mola_mola
ENSRNOG00000028341	Alkbh5	100	88.354	ENSMODG00000013731	ALKBH5	100	88.101	Monodelphis_domestica
ENSRNOG00000028341	Alkbh5	99	63.959	ENSMALG00000018344	alkbh5	99	63.027	Monopterus_albus
ENSRNOG00000028341	Alkbh5	100	99.494	MGP_CAROLIEiJ_G0016458	Alkbh5	100	99.494	Mus_caroli
ENSRNOG00000028341	Alkbh5	100	99.494	ENSMUSG00000042650	Alkbh5	100	99.494	Mus_musculus
ENSRNOG00000028341	Alkbh5	100	99.747	MGP_PahariEiJ_G0017588	Alkbh5	100	99.747	Mus_pahari
ENSRNOG00000028341	Alkbh5	100	99.494	MGP_SPRETEiJ_G0017293	Alkbh5	100	99.494	Mus_spretus
ENSRNOG00000028341	Alkbh5	100	96.962	ENSMPUG00000000032	ALKBH5	100	96.962	Mustela_putorius_furo
ENSRNOG00000028341	Alkbh5	100	96.962	ENSMLUG00000001337	ALKBH5	100	96.962	Myotis_lucifugus
ENSRNOG00000028341	Alkbh5	100	96.962	ENSNGAG00000011033	Alkbh5	100	96.962	Nannospalax_galili
ENSRNOG00000028341	Alkbh5	99	64.213	ENSNBRG00000009936	alkbh5	99	63.452	Neolamprologus_brichardi
ENSRNOG00000028341	Alkbh5	100	91.646	ENSNLEG00000035985	ALKBH5	100	91.646	Nomascus_leucogenys
ENSRNOG00000028341	Alkbh5	100	86.582	ENSMEUG00000010609	ALKBH5	88	86.582	Notamacropus_eugenii
ENSRNOG00000028341	Alkbh5	100	97.468	ENSODEG00000005760	ALKBH5	100	97.468	Octodon_degus
ENSRNOG00000028341	Alkbh5	99	64.213	ENSONIG00000003181	alkbh5	99	63.959	Oreochromis_niloticus
ENSRNOG00000028341	Alkbh5	99	90.306	ENSOCUG00000009240	ALKBH5	87	90.306	Oryctolagus_cuniculus
ENSRNOG00000028341	Alkbh5	100	63.636	ENSORLG00000009235	alkbh5	100	63.366	Oryzias_latipes
ENSRNOG00000028341	Alkbh5	100	63.384	ENSORLG00020011448	alkbh5	94	69.231	Oryzias_latipes_hni
ENSRNOG00000028341	Alkbh5	100	63.636	ENSORLG00015010675	alkbh5	100	63.366	Oryzias_latipes_hsok
ENSRNOG00000028341	Alkbh5	99	64.721	ENSOMEG00000020820	alkbh5	99	64.179	Oryzias_melastigma
ENSRNOG00000028341	Alkbh5	100	97.468	ENSPPAG00000030479	ALKBH5	100	97.468	Pan_paniscus
ENSRNOG00000028341	Alkbh5	100	96.709	ENSPPRG00000017981	ALKBH5	100	96.709	Panthera_pardus
ENSRNOG00000028341	Alkbh5	100	97.468	ENSPTRG00000024216	ALKBH5	100	97.468	Pan_troglodytes
ENSRNOG00000028341	Alkbh5	100	97.468	ENSPANG00000023682	ALKBH5	100	97.468	Papio_anubis
ENSRNOG00000028341	Alkbh5	99	65.909	ENSPKIG00000013829	ALKBH5	99	67.172	Paramormyrops_kingsleyae
ENSRNOG00000028341	Alkbh5	93	65.312	ENSPKIG00000017327	alkbh5	96	64.516	Paramormyrops_kingsleyae
ENSRNOG00000028341	Alkbh5	99	80.856	ENSPSIG00000009583	ALKBH5	99	79.800	Pelodiscus_sinensis
ENSRNOG00000028341	Alkbh5	99	62.183	ENSPMGG00000009517	alkbh5	99	63.889	Periophthalmus_magnuspinnatus
ENSRNOG00000028341	Alkbh5	100	89.114	ENSPCIG00000001861	ALKBH5	100	88.861	Phascolarctos_cinereus
ENSRNOG00000028341	Alkbh5	99	63.131	ENSPFOG00000004159	alkbh5	99	63.728	Poecilia_formosa
ENSRNOG00000028341	Alkbh5	99	63.452	ENSPLAG00000010799	alkbh5	99	64.051	Poecilia_latipinna
ENSRNOG00000028341	Alkbh5	99	63.452	ENSPMEG00000020572	alkbh5	99	64.051	Poecilia_mexicana
ENSRNOG00000028341	Alkbh5	99	63.706	ENSPREG00000000055	alkbh5	99	64.304	Poecilia_reticulata
ENSRNOG00000028341	Alkbh5	99	76.142	ENSPCAG00000011113	ALKBH5	88	76.142	Procavia_capensis
ENSRNOG00000028341	Alkbh5	100	97.215	ENSPCOG00000000705	ALKBH5	100	97.215	Propithecus_coquereli
ENSRNOG00000028341	Alkbh5	98	97.409	ENSPVAG00000005776	ALKBH5	88	97.409	Pteropus_vampyrus
ENSRNOG00000028341	Alkbh5	99	63.959	ENSPNYG00000020156	alkbh5	99	63.452	Pundamilia_nyererei
ENSRNOG00000028341	Alkbh5	99	63.317	ENSPNAG00000014968	alkbh5	99	63.636	Pygocentrus_nattereri
ENSRNOG00000028341	Alkbh5	100	97.468	ENSRBIG00000029698	ALKBH5	100	97.468	Rhinopithecus_bieti
ENSRNOG00000028341	Alkbh5	100	97.468	ENSRROG00000033654	ALKBH5	100	97.468	Rhinopithecus_roxellana
ENSRNOG00000028341	Alkbh5	86	90.294	ENSSBOG00000023339	ALKBH5	99	90.294	Saimiri_boliviensis_boliviensis
ENSRNOG00000028341	Alkbh5	98	88.946	ENSSHAG00000005278	ALKBH5	93	88.689	Sarcophilus_harrisii
ENSRNOG00000028341	Alkbh5	99	66.835	ENSSFOG00015008148	alkbh5	99	66.582	Scleropages_formosus
ENSRNOG00000028341	Alkbh5	78	69.159	ENSSFOG00015023592	ALKBH5	90	69.040	Scleropages_formosus
ENSRNOG00000028341	Alkbh5	99	63.959	ENSSMAG00000000195	alkbh5	99	63.198	Scophthalmus_maximus
ENSRNOG00000028341	Alkbh5	99	63.544	ENSSDUG00000015880	alkbh5	99	63.797	Seriola_dumerili
ENSRNOG00000028341	Alkbh5	99	62.944	ENSSLDG00000022333	alkbh5	99	63.198	Seriola_lalandi_dorsalis
ENSRNOG00000028341	Alkbh5	98	78.663	ENSSARG00000009722	ALKBH5	83	79.231	Sorex_araneus
ENSRNOG00000028341	Alkbh5	99	80.201	ENSSPUG00000004432	ALKBH5	99	80.402	Sphenodon_punctatus
ENSRNOG00000028341	Alkbh5	99	64.213	ENSSPAG00000011009	alkbh5	99	64.810	Stegastes_partitus
ENSRNOG00000028341	Alkbh5	100	93.671	ENSSSCG00000035120	ALKBH5	100	93.924	Sus_scrofa
ENSRNOG00000028341	Alkbh5	99	77.468	ENSTGUG00000007229	ALKBH5	99	79.293	Taeniopygia_guttata
ENSRNOG00000028341	Alkbh5	99	60.759	ENSTRUG00000013324	alkbh5	99	60.506	Takifugu_rubripes
ENSRNOG00000028341	Alkbh5	99	61.616	ENSTNIG00000008275	alkbh5	99	61.869	Tetraodon_nigroviridis
ENSRNOG00000028341	Alkbh5	98	95.078	ENSTTRG00000008156	ALKBH5	87	95.337	Tursiops_truncatus
ENSRNOG00000028341	Alkbh5	100	96.962	ENSUAMG00000010729	ALKBH5	100	96.962	Ursus_americanus
ENSRNOG00000028341	Alkbh5	92	81.768	ENSVPAG00000008327	ALKBH5	87	81.768	Vicugna_pacos
ENSRNOG00000028341	Alkbh5	100	92.152	ENSVVUG00000030107	ALKBH5	100	92.152	Vulpes_vulpes
ENSRNOG00000028341	Alkbh5	99	63.038	ENSXETG00000005769	alkbh5	99	62.785	Xenopus_tropicalis
ENSRNOG00000028341	Alkbh5	99	63.198	ENSXCOG00000005331	alkbh5	99	63.065	Xiphophorus_couchianus
ENSRNOG00000028341	Alkbh5	99	62.944	ENSXMAG00000015514	alkbh5	95	62.814	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001666	response to hypoxia	-	ISO	Process
GO:0001666	response to hypoxia	-	ISS	Process
GO:0004622	lysophospholipase activity	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005794	Golgi apparatus	-	IEA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006397	mRNA processing	21873635.	IBA	Process
GO:0006397	mRNA processing	-	ISO	Process
GO:0006397	mRNA processing	-	ISS	Process
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0006406	mRNA export from nucleus	-	ISO	Process
GO:0006406	mRNA export from nucleus	-	ISS	Process
GO:0007283	spermatogenesis	-	ISO	Process
GO:0007283	spermatogenesis	-	ISS	Process
GO:0016607	nuclear speck	-	ISO	Component
GO:0016607	nuclear speck	-	ISS	Component
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	-	ISO	Function
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	-	ISS	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0035553	oxidative single-stranded RNA demethylation	21873635.	IBA	Process
GO:0035553	oxidative single-stranded RNA demethylation	-	ISO	Process
GO:0035553	oxidative single-stranded RNA demethylation	-	ISS	Process
GO:0043488	regulation of mRNA stability	-	ISO	Process
GO:0043488	regulation of mRNA stability	-	ISS	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:1990931	RNA N6-methyladenosine dioxygenase activity	-	ISO	Function
GO:1990931	RNA N6-methyladenosine dioxygenase activity	-	ISS	Function