EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000028584 (Gene tree)
Gene ID: 304578
Gene Symbol: Alkbh2
Alias: LOC304578|RGD1306377
Full Name: alkB homolog 2%2C alpha-ketoglutarate-dependent dioxygenase
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 4635 bases
Position: chr12:48257609-48262243
Accession: 1306377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000030705	2OG-FeII_Oxy_2	PF13532.6	1.4e-27	1	1
ENSRNOP00000073418	2OG-FeII_Oxy_2	PF13532.6	2.2e-27	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000090277	-	889	XM_006249498	ENSRNOP00000073418	287 (aa)	XP_006249560	A0A0G2K5G5
ENSRNOT00000031658	-	1210	-	ENSRNOP00000030705	239 (aa)	-	B2GV68

Gene Model

Click here to download ENSRNOG00000028584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000028584's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000028584	Alkbh2	80	36.082	ENSRNOG00000021678	Alkbh3	64	36.224

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000028584	Alkbh2	100	75.096	ENSG00000189046	ALKBH2	100	75.096	Homo_sapiens
ENSRNOG00000028584	Alkbh2	86	67.805	ENSAPOG00000007623	alkbh2	78	67.805	Acanthochromis_polyacanthus
ENSRNOG00000028584	Alkbh2	100	73.563	ENSAMEG00000016522	ALKBH2	100	73.563	Ailuropoda_melanoleuca
ENSRNOG00000028584	Alkbh2	84	68.159	ENSACIG00000016682	alkbh2	79	67.317	Amphilophus_citrinellus
ENSRNOG00000028584	Alkbh2	86	68.293	ENSAOCG00000014727	alkbh2	79	68.293	Amphiprion_ocellaris
ENSRNOG00000028584	Alkbh2	84	68.159	ENSAPEG00000023482	alkbh2	77	68.159	Amphiprion_percula
ENSRNOG00000028584	Alkbh2	85	65.686	ENSATEG00000009404	alkbh2	80	65.686	Anabas_testudineus
ENSRNOG00000028584	Alkbh2	69	68.485	ENSAPLG00000015118	ALKBH2	99	68.485	Anas_platyrhynchos
ENSRNOG00000028584	Alkbh2	100	74.330	ENSANAG00000028088	ALKBH2	100	74.330	Aotus_nancymaae
ENSRNOG00000028584	Alkbh2	84	68.159	ENSACLG00000026149	alkbh2	74	68.159	Astatotilapia_calliptera
ENSRNOG00000028584	Alkbh2	85	66.019	ENSAMXG00000034686	alkbh2	79	66.019	Astyanax_mexicanus
ENSRNOG00000028584	Alkbh2	100	73.846	ENSBTAG00000019846	ALKBH2	94	73.846	Bos_taurus
ENSRNOG00000028584	Alkbh2	100	72.414	ENSCJAG00000010151	ALKBH2	100	72.797	Callithrix_jacchus
ENSRNOG00000028584	Alkbh2	100	76.062	ENSCAFG00000011152	ALKBH2	100	76.062	Canis_familiaris
ENSRNOG00000028584	Alkbh2	100	76.062	ENSCAFG00020022165	ALKBH2	100	76.062	Canis_lupus_dingo
ENSRNOG00000028584	Alkbh2	100	76.569	ENSCHIG00000012352	ALKBH2	100	76.569	Capra_hircus
ENSRNOG00000028584	Alkbh2	91	82.110	ENSTSYG00000012299	ALKBH2	100	81.166	Carlito_syrichta
ENSRNOG00000028584	Alkbh2	100	77.406	ENSCAPG00000009909	ALKBH2	100	77.406	Cavia_aperea
ENSRNOG00000028584	Alkbh2	87	84.615	ENSCPOG00000033616	ALKBH2	100	72.031	Cavia_porcellus
ENSRNOG00000028584	Alkbh2	100	73.563	ENSCCAG00000020322	ALKBH2	100	73.563	Cebus_capucinus
ENSRNOG00000028584	Alkbh2	100	74.330	ENSCATG00000017055	ALKBH2	100	74.330	Cercocebus_atys
ENSRNOG00000028584	Alkbh2	97	79.828	ENSCLAG00000011668	ALKBH2	100	73.077	Chinchilla_lanigera
ENSRNOG00000028584	Alkbh2	100	73.946	ENSCSAG00000002853	ALKBH2	100	73.946	Chlorocebus_sabaeus
ENSRNOG00000028584	Alkbh2	100	69.349	ENSCHOG00000004849	ALKBH2	100	69.349	Choloepus_hoffmanni
ENSRNOG00000028584	Alkbh2	100	62.403	ENSCPBG00000006832	ALKBH2	99	62.403	Chrysemys_picta_bellii
ENSRNOG00000028584	Alkbh2	100	74.330	ENSCANG00000023953	ALKBH2	100	74.330	Colobus_angolensis_palliatus
ENSRNOG00000028584	Alkbh2	100	87.866	ENSCGRG00001022310	Alkbh2	98	88.017	Cricetulus_griseus_chok1gshd
ENSRNOG00000028584	Alkbh2	100	87.866	ENSCGRG00000007388	Alkbh2	98	88.017	Cricetulus_griseus_crigri
ENSRNOG00000028584	Alkbh2	90	62.791	ENSCSEG00000007839	alkbh2	98	62.791	Cynoglossus_semilaevis
ENSRNOG00000028584	Alkbh2	84	65.672	ENSCVAG00000004447	alkbh2	75	65.672	Cyprinodon_variegatus
ENSRNOG00000028584	Alkbh2	100	56.574	ENSDARG00000059856	alkbh2	97	56.574	Danio_rerio
ENSRNOG00000028584	Alkbh2	100	71.161	ENSDNOG00000041493	ALKBH2	100	71.161	Dasypus_novemcinctus
ENSRNOG00000028584	Alkbh2	99	71.984	ENSDORG00000012978	Alkbh2	91	84.314	Dipodomys_ordii
ENSRNOG00000028584	Alkbh2	93	73.543	ENSETEG00000015554	-	91	73.543	Echinops_telfairi
ENSRNOG00000028584	Alkbh2	85	56.650	ENSETEG00000015272	-	85	56.650	Echinops_telfairi
ENSRNOG00000028584	Alkbh2	92	53.712	ENSEBUG00000006927	alkbh2	94	51.012	Eptatretus_burgeri
ENSRNOG00000028584	Alkbh2	100	72.031	ENSEASG00005014540	ALKBH2	100	72.031	Equus_asinus_asinus
ENSRNOG00000028584	Alkbh2	100	72.414	ENSECAG00000015963	ALKBH2	100	72.414	Equus_caballus
ENSRNOG00000028584	Alkbh2	100	68.582	ENSEEUG00000004370	ALKBH2	100	69.615	Erinaceus_europaeus
ENSRNOG00000028584	Alkbh2	98	54.651	ENSELUG00000012752	alkbh2	98	54.651	Esox_lucius
ENSRNOG00000028584	Alkbh2	100	74.330	ENSFCAG00000008348	ALKBH2	100	74.330	Felis_catus
ENSRNOG00000028584	Alkbh2	85	68.137	ENSFALG00000008845	ALKBH2	94	62.882	Ficedula_albicollis
ENSRNOG00000028584	Alkbh2	100	73.180	ENSFDAG00000006838	ALKBH2	100	73.180	Fukomys_damarensis
ENSRNOG00000028584	Alkbh2	84	65.672	ENSFHEG00000015182	alkbh2	76	65.672	Fundulus_heteroclitus
ENSRNOG00000028584	Alkbh2	100	61.789	ENSGALG00000035152	ALKBH2	99	61.789	Gallus_gallus
ENSRNOG00000028584	Alkbh2	84	66.500	ENSGAFG00000012816	alkbh2	74	66.500	Gambusia_affinis
ENSRNOG00000028584	Alkbh2	84	66.667	ENSGACG00000008931	alkbh2	98	66.000	Gasterosteus_aculeatus
ENSRNOG00000028584	Alkbh2	100	62.403	ENSGAGG00000024223	ALKBH2	99	62.403	Gopherus_agassizii
ENSRNOG00000028584	Alkbh2	100	74.713	ENSGGOG00000009621	ALKBH2	100	74.713	Gorilla_gorilla
ENSRNOG00000028584	Alkbh2	84	67.164	ENSHBUG00000004904	alkbh2	70	67.164	Haplochromis_burtoni
ENSRNOG00000028584	Alkbh2	94	82.143	ENSHGLG00000010740	ALKBH2	99	82.143	Heterocephalus_glaber_female
ENSRNOG00000028584	Alkbh2	91	82.949	ENSHGLG00100015351	ALKBH2	100	72.797	Heterocephalus_glaber_male
ENSRNOG00000028584	Alkbh2	86	64.878	ENSHCOG00000009277	alkbh2	81	64.878	Hippocampus_comes
ENSRNOG00000028584	Alkbh2	93	58.744	ENSIPUG00000020407	alkbh2	90	58.744	Ictalurus_punctatus
ENSRNOG00000028584	Alkbh2	89	82.075	ENSSTOG00000028697	ALKBH2	97	82.075	Ictidomys_tridecemlineatus
ENSRNOG00000028584	Alkbh2	84	68.657	ENSKMAG00000016580	alkbh2	71	68.657	Kryptolebias_marmoratus
ENSRNOG00000028584	Alkbh2	86	68.293	ENSLACG00000012552	ALKBH2	79	67.822	Latimeria_chalumnae
ENSRNOG00000028584	Alkbh2	88	64.151	ENSLOCG00000004502	alkbh2	77	64.151	Lepisosteus_oculatus
ENSRNOG00000028584	Alkbh2	100	73.333	ENSLAFG00000013508	ALKBH2	100	73.333	Loxodonta_africana
ENSRNOG00000028584	Alkbh2	100	74.330	ENSMFAG00000003561	ALKBH2	100	74.330	Macaca_fascicularis
ENSRNOG00000028584	Alkbh2	100	74.330	ENSMMUG00000039553	ALKBH2	100	74.330	Macaca_mulatta
ENSRNOG00000028584	Alkbh2	100	74.713	ENSMNEG00000029095	ALKBH2	100	74.713	Macaca_nemestrina
ENSRNOG00000028584	Alkbh2	100	74.330	ENSMLEG00000014738	ALKBH2	100	74.330	Mandrillus_leucophaeus
ENSRNOG00000028584	Alkbh2	99	62.500	ENSMAMG00000015909	alkbh2	99	62.500	Mastacembelus_armatus
ENSRNOG00000028584	Alkbh2	84	67.662	ENSMZEG00005015463	alkbh2	76	66.829	Maylandia_zebra
ENSRNOG00000028584	Alkbh2	100	61.826	ENSMGAG00000005978	ALKBH2	99	61.826	Meleagris_gallopavo
ENSRNOG00000028584	Alkbh2	100	88.703	ENSMAUG00000009228	Alkbh2	100	88.703	Mesocricetus_auratus
ENSRNOG00000028584	Alkbh2	100	74.615	ENSMICG00000017626	ALKBH2	100	74.615	Microcebus_murinus
ENSRNOG00000028584	Alkbh2	100	86.611	ENSMOCG00000013405	Alkbh2	100	86.611	Microtus_ochrogaster
ENSRNOG00000028584	Alkbh2	82	67.005	ENSMMOG00000017660	alkbh2	78	67.005	Mola_mola
ENSRNOG00000028584	Alkbh2	86	70.335	ENSMODG00000019351	ALKBH2	94	64.167	Monodelphis_domestica
ENSRNOG00000028584	Alkbh2	86	66.341	ENSMALG00000014214	alkbh2	70	66.341	Monopterus_albus
ENSRNOG00000028584	Alkbh2	100	91.632	MGP_CAROLIEiJ_G0027589	Alkbh2	100	91.632	Mus_caroli
ENSRNOG00000028584	Alkbh2	100	90.377	ENSMUSG00000044339	Alkbh2	100	90.377	Mus_musculus
ENSRNOG00000028584	Alkbh2	100	90.377	MGP_PahariEiJ_G0024171	Alkbh2	100	90.377	Mus_pahari
ENSRNOG00000028584	Alkbh2	100	89.540	MGP_SPRETEiJ_G0028587	Alkbh2	100	89.540	Mus_spretus
ENSRNOG00000028584	Alkbh2	100	74.231	ENSMPUG00000003459	-	100	74.231	Mustela_putorius_furo
ENSRNOG00000028584	Alkbh2	100	72.587	ENSMLUG00000010708	ALKBH2	100	72.587	Myotis_lucifugus
ENSRNOG00000028584	Alkbh2	100	76.378	ENSNGAG00000011661	Alkbh2	100	76.378	Nannospalax_galili
ENSRNOG00000028584	Alkbh2	84	67.164	ENSNBRG00000007907	alkbh2	74	67.164	Neolamprologus_brichardi
ENSRNOG00000028584	Alkbh2	100	74.713	ENSNLEG00000028158	ALKBH2	100	74.713	Nomascus_leucogenys
ENSRNOG00000028584	Alkbh2	100	64.591	ENSMEUG00000015786	ALKBH2	100	64.591	Notamacropus_eugenii
ENSRNOG00000028584	Alkbh2	100	70.385	ENSOPRG00000006486	ALKBH2	100	70.385	Ochotona_princeps
ENSRNOG00000028584	Alkbh2	97	77.253	ENSODEG00000007069	ALKBH2	99	77.253	Octodon_degus
ENSRNOG00000028584	Alkbh2	84	67.164	ENSONIG00000013438	alkbh2	90	58.264	Oreochromis_niloticus
ENSRNOG00000028584	Alkbh2	84	77.000	ENSOANG00000008803	ALKBH2	69	77.000	Ornithorhynchus_anatinus
ENSRNOG00000028584	Alkbh2	100	71.429	ENSOCUG00000021524	ALKBH2	100	71.429	Oryctolagus_cuniculus
ENSRNOG00000028584	Alkbh2	100	58.750	ENSORLG00000007111	alkbh2	100	58.750	Oryzias_latipes
ENSRNOG00000028584	Alkbh2	96	60.000	ENSORLG00020015043	alkbh2	76	60.000	Oryzias_latipes_hni
ENSRNOG00000028584	Alkbh2	77	64.865	ENSORLG00015003480	alkbh2	80	64.865	Oryzias_latipes_hsok
ENSRNOG00000028584	Alkbh2	86	64.390	ENSOMEG00000002262	alkbh2	80	64.390	Oryzias_melastigma
ENSRNOG00000028584	Alkbh2	100	74.525	ENSOGAG00000028772	ALKBH2	100	74.525	Otolemur_garnettii
ENSRNOG00000028584	Alkbh2	100	72.308	ENSOARG00000016925	ALKBH2	100	72.308	Ovis_aries
ENSRNOG00000028584	Alkbh2	100	75.096	ENSPPAG00000033974	ALKBH2	100	75.096	Pan_paniscus
ENSRNOG00000028584	Alkbh2	100	75.769	ENSPPRG00000009996	ALKBH2	100	75.769	Panthera_pardus
ENSRNOG00000028584	Alkbh2	100	75.769	ENSPTIG00000013829	ALKBH2	100	75.769	Panthera_tigris_altaica
ENSRNOG00000028584	Alkbh2	100	75.096	ENSPTRG00000050273	-	100	75.096	Pan_troglodytes
ENSRNOG00000028584	Alkbh2	100	75.096	ENSPTRG00000005418	ALKBH2	100	75.096	Pan_troglodytes
ENSRNOG00000028584	Alkbh2	100	74.330	ENSPANG00000021815	ALKBH2	100	74.330	Papio_anubis
ENSRNOG00000028584	Alkbh2	84	66.169	ENSPKIG00000025109	alkbh2	77	66.169	Paramormyrops_kingsleyae
ENSRNOG00000028584	Alkbh2	98	66.239	ENSPSIG00000006219	ALKBH2	90	65.289	Pelodiscus_sinensis
ENSRNOG00000028584	Alkbh2	99	58.228	ENSPMGG00000018795	alkbh2	95	56.557	Periophthalmus_magnuspinnatus
ENSRNOG00000028584	Alkbh2	100	85.356	ENSPEMG00000008584	Alkbh2	100	85.356	Peromyscus_maniculatus_bairdii
ENSRNOG00000028584	Alkbh2	100	63.953	ENSPCIG00000022555	ALKBH2	100	63.953	Phascolarctos_cinereus
ENSRNOG00000028584	Alkbh2	84	65.672	ENSPFOG00000011495	alkbh2	82	65.672	Poecilia_formosa
ENSRNOG00000028584	Alkbh2	84	66.169	ENSPLAG00000002514	alkbh2	82	66.169	Poecilia_latipinna
ENSRNOG00000028584	Alkbh2	84	65.672	ENSPMEG00000021077	alkbh2	70	59.052	Poecilia_mexicana
ENSRNOG00000028584	Alkbh2	84	66.169	ENSPREG00000022190	alkbh2	72	66.169	Poecilia_reticulata
ENSRNOG00000028584	Alkbh2	100	73.180	ENSPPYG00000004928	ALKBH2	100	73.180	Pongo_abelii
ENSRNOG00000028584	Alkbh2	72	79.208	ENSPCAG00000014050	ALKBH2	74	79.208	Procavia_capensis
ENSRNOG00000028584	Alkbh2	100	74.713	ENSPCOG00000026329	ALKBH2	100	74.713	Propithecus_coquereli
ENSRNOG00000028584	Alkbh2	100	75.769	ENSPVAG00000007456	ALKBH2	100	75.769	Pteropus_vampyrus
ENSRNOG00000028584	Alkbh2	84	68.159	ENSPNYG00000015974	alkbh2	74	68.159	Pundamilia_nyererei
ENSRNOG00000028584	Alkbh2	82	66.497	ENSPNAG00000020308	alkbh2	80	64.878	Pygocentrus_nattereri
ENSRNOG00000028584	Alkbh2	100	74.713	ENSRBIG00000042275	ALKBH2	100	74.713	Rhinopithecus_bieti
ENSRNOG00000028584	Alkbh2	100	74.713	ENSRROG00000034240	ALKBH2	100	74.713	Rhinopithecus_roxellana
ENSRNOG00000028584	Alkbh2	100	73.563	ENSSBOG00000035955	ALKBH2	100	73.563	Saimiri_boliviensis_boliviensis
ENSRNOG00000028584	Alkbh2	100	63.985	ENSSHAG00000011255	ALKBH2	100	63.985	Sarcophilus_harrisii
ENSRNOG00000028584	Alkbh2	97	61.039	ENSSFOG00015003695	alkbh2	76	61.039	Scleropages_formosus
ENSRNOG00000028584	Alkbh2	86	63.902	ENSSMAG00000014354	alkbh2	86	60.987	Scophthalmus_maximus
ENSRNOG00000028584	Alkbh2	86	68.780	ENSSDUG00000012133	alkbh2	78	68.780	Seriola_dumerili
ENSRNOG00000028584	Alkbh2	86	68.780	ENSSLDG00000025131	alkbh2	78	68.780	Seriola_lalandi_dorsalis
ENSRNOG00000028584	Alkbh2	90	71.028	ENSSPUG00000009212	ALKBH2	80	71.028	Sphenodon_punctatus
ENSRNOG00000028584	Alkbh2	86	66.341	ENSSPAG00000011786	alkbh2	86	63.556	Stegastes_partitus
ENSRNOG00000028584	Alkbh2	100	73.462	ENSSSCG00000009940	ALKBH2	100	73.462	Sus_scrofa
ENSRNOG00000028584	Alkbh2	85	66.827	ENSTGUG00000007068	ALKBH2	98	61.224	Taeniopygia_guttata
ENSRNOG00000028584	Alkbh2	84	66.000	ENSTRUG00000021601	alkbh2	80	66.000	Takifugu_rubripes
ENSRNOG00000028584	Alkbh2	84	67.500	ENSTNIG00000015875	alkbh2	90	67.500	Tetraodon_nigroviridis
ENSRNOG00000028584	Alkbh2	100	71.154	ENSTTRG00000008072	ALKBH2	100	71.154	Tursiops_truncatus
ENSRNOG00000028584	Alkbh2	100	73.077	ENSUAMG00000022432	ALKBH2	100	73.077	Ursus_americanus
ENSRNOG00000028584	Alkbh2	100	73.846	ENSUMAG00000005759	ALKBH2	100	73.846	Ursus_maritimus
ENSRNOG00000028584	Alkbh2	100	79.752	ENSVVUG00000008059	ALKBH2	100	79.752	Vulpes_vulpes
ENSRNOG00000028584	Alkbh2	98	59.402	ENSXETG00000022300	alkbh2	97	59.402	Xenopus_tropicalis
ENSRNOG00000028584	Alkbh2	84	67.164	ENSXMAG00000018252	alkbh2	83	67.164	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004519	endonuclease activity	-	ISO	Function
GO:0004527	exonuclease activity	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006307	DNA dealkylation involved in DNA repair	21873635.	IBA	Process
GO:0006307	DNA dealkylation involved in DNA repair	-	ISO	Process
GO:0008198	ferrous iron binding	21873635.	IBA	Function
GO:0008198	ferrous iron binding	-	ISO	Function
GO:0015630	microtubule cytoskeleton	-	IEA	Component
GO:0015630	microtubule cytoskeleton	-	ISO	Component
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	-	ISO	Function
GO:0035511	oxidative DNA demethylation	21873635.	IBA	Process
GO:0035511	oxidative DNA demethylation	-	ISO	Process
GO:0043734	DNA-N1-methyladenine dioxygenase activity	21873635.	IBA	Function
GO:0043734	DNA-N1-methyladenine dioxygenase activity	-	ISO	Function
GO:0051747	cytosine C-5 DNA demethylase activity	21873635.	IBA	Function
GO:0051747	cytosine C-5 DNA demethylase activity	-	ISO	Function