EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSRNOG00000028592 (Gene tree)
Gene ID
-
Gene Symbol
AABR07035074.1
Alias
-
Full Name
similar to Pabpc4_predicted protein
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
1978 bases
Position
chr12:3922438-3924415
Accession
288398
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000059726PABPPF00658.181.4e-3111
ENSRNOP00000059726RRM_5PF13893.61.3e-0612
ENSRNOP00000059726RRM_5PF13893.61.3e-0622
ENSRNOP00000059726RRM_1PF00076.221.4e-8414
ENSRNOP00000059726RRM_1PF00076.221.4e-8424
ENSRNOP00000059726RRM_1PF00076.221.4e-8434
ENSRNOP00000059726RRM_1PF00076.221.4e-8444
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000067752AABR07035074.1-2011926XM_008769025ENSRNOP00000059726642 (aa)-D3ZSR2
Gene Model
Click here to download ENSRNOG00000028592's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000028592's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000028592AABR07035074.15631.788ENSRNOG00000006853Elavl28631.788
ENSRNOG00000028592AABR07035074.15730.864ENSRNOG00000023601Elavl48930.864
ENSRNOG00000028592AABR07035074.15967.391ENSRNOG00000029749Pabpc4l9967.391
ENSRNOG00000028592AABR07035074.19966.058ENSRNOG00000017367Pabpc69966.311
ENSRNOG00000028592AABR07035074.110097.826ENSRNOG00000015642Pabpc410097.826
ENSRNOG00000028592AABR07035074.19967.138ENSRNOG00000014527Pabpc29866.824
ENSRNOG00000028592AABR07035074.19857.054ENSRNOG00000012750Pabpc1l9957.753
ENSRNOG00000028592AABR07035074.15764.266ENSRNOG00000003354Pabpc59664.130
ENSRNOG00000028592AABR07035074.15235.526ENSRNOG00000023661Celf25635.526
ENSRNOG00000028592AABR07035074.15634.437ENSRNOG00000001069Elavl19434.437
ENSRNOG00000028592AABR07035074.19975.625ENSRNOG00000008639Pabpc19875.625
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000028592AABR07035074.110095.807ENSG00000090621PABPC49998.507Homo_sapiens
ENSRNOG00000028592AABR07035074.19979.283ENSAPOG00000001161pabpc410079.632Acanthochromis_polyacanthus
ENSRNOG00000028592AABR07035074.19852.765ENSAMEG00000015083-9952.607Ailuropoda_melanoleuca
ENSRNOG00000028592AABR07035074.110093.333ENSAMEG00000011535-10093.333Ailuropoda_melanoleuca
ENSRNOG00000028592AABR07035074.110079.632ENSACIG00000023343pabpc410079.542Amphilophus_citrinellus
ENSRNOG00000028592AABR07035074.19979.439ENSAOCG00000021529pabpc410079.389Amphiprion_ocellaris
ENSRNOG00000028592AABR07035074.19979.439ENSAPEG00000019196pabpc410079.389Amphiprion_percula
ENSRNOG00000028592AABR07035074.19978.760ENSATEG00000007402pabpc410078.659Anabas_testudineus
ENSRNOG00000028592AABR07035074.19985.692ENSAPLG00000009729-10085.692Anas_platyrhynchos
ENSRNOG00000028592AABR07035074.19984.266ENSACAG00000002544PABPC410084.266Anolis_carolinensis
ENSRNOG00000028592AABR07035074.110093.636ENSANAG00000025079PABPC410093.636Aotus_nancymaae
ENSRNOG00000028592AABR07035074.110079.173ENSACLG00000019558pabpc410079.786Astatotilapia_calliptera
ENSRNOG00000028592AABR07035074.19975.428ENSAMXG00000018779pabpc49975.116Astyanax_mexicanus
ENSRNOG00000028592AABR07035074.110095.814ENSBTAG00000017125PABPC410095.814Bos_taurus
ENSRNOG00000028592AABR07035074.15683.234ENSBTAG00000048536-9383.234Bos_taurus
ENSRNOG00000028592AABR07035074.110093.182ENSCJAG00000002512-10093.182Callithrix_jacchus
ENSRNOG00000028592AABR07035074.16583.333ENSCJAG00000045953-9285.156Callithrix_jacchus
ENSRNOG00000028592AABR07035074.19993.289ENSCAFG00000003081PABPC410092.236Canis_familiaris
ENSRNOG00000028592AABR07035074.110093.485ENSCAFG00020004161PABPC410093.485Canis_lupus_dingo
ENSRNOG00000028592AABR07035074.110093.636ENSCHIG00000019398-10093.636Capra_hircus
ENSRNOG00000028592AABR07035074.110076.087ENSCHIG00000023385-10076.087Capra_hircus
ENSRNOG00000028592AABR07035074.110093.636ENSTSYG00000006532PABPC410093.636Carlito_syrichta
ENSRNOG00000028592AABR07035074.19993.769ENSCAPG00000015984PABPC410093.769Cavia_aperea
ENSRNOG00000028592AABR07035074.110093.788ENSCPOG00000009552PABPC410093.788Cavia_porcellus
ENSRNOG00000028592AABR07035074.110093.333ENSCCAG00000037306PABPC410093.333Cebus_capucinus
ENSRNOG00000028592AABR07035074.110093.636ENSCATG00000042164PABPC410093.636Cercocebus_atys
ENSRNOG00000028592AABR07035074.110093.333ENSCLAG00000011899PABPC410093.333Chinchilla_lanigera
ENSRNOG00000028592AABR07035074.110093.636ENSCSAG00000001135PABPC410093.636Chlorocebus_sabaeus
ENSRNOG00000028592AABR07035074.18493.668ENSCHOG00000005327PABPC48193.668Choloepus_hoffmanni
ENSRNOG00000028592AABR07035074.19986.003ENSCPBG00000001038PABPC410086.003Chrysemys_picta_bellii
ENSRNOG00000028592AABR07035074.19993.395ENSCANG00000034177PABPC410093.395Colobus_angolensis_palliatus
ENSRNOG00000028592AABR07035074.110093.051ENSCGRG00001018166Pabpc49993.051Cricetulus_griseus_chok1gshd
ENSRNOG00000028592AABR07035074.19995.290ENSCGRG00000009777Pabpc49995.290Cricetulus_griseus_crigri
ENSRNOG00000028592AABR07035074.110078.407ENSCSEG00000000130pabpc410078.215Cynoglossus_semilaevis
ENSRNOG00000028592AABR07035074.19979.316ENSCVAG00000019246pabpc410080.000Cyprinodon_variegatus
ENSRNOG00000028592AABR07035074.19980.124ENSDARG00000059259pabpc410079.524Danio_rerio
ENSRNOG00000028592AABR07035074.19893.448ENSDNOG00000018444-9993.448Dasypus_novemcinctus
ENSRNOG00000028592AABR07035074.110096.273ENSDORG00000011581Pabpc410096.273Dipodomys_ordii
ENSRNOG00000028592AABR07035074.18660.217ENSETEG00000009172-9960.107Echinops_telfairi
ENSRNOG00000028592AABR07035074.110095.312ENSETEG00000018453-8495.312Echinops_telfairi
ENSRNOG00000028592AABR07035074.19772.627ENSEBUG00000013782pabpc49973.178Eptatretus_burgeri
ENSRNOG00000028592AABR07035074.19972.969ENSEBUG00000000992pabpc49972.699Eptatretus_burgeri
ENSRNOG00000028592AABR07035074.110093.636ENSEASG00005014119PABPC410093.636Equus_asinus_asinus
ENSRNOG00000028592AABR07035074.110093.636ENSECAG00000009396PABPC410093.636Equus_caballus
ENSRNOG00000028592AABR07035074.110090.606ENSEEUG00000002962PABPC410090.606Erinaceus_europaeus
ENSRNOG00000028592AABR07035074.19979.375ENSELUG00000003195pabpc49978.802Esox_lucius
ENSRNOG00000028592AABR07035074.110093.636ENSFCAG00000015254-10093.636Felis_catus
ENSRNOG00000028592AABR07035074.19985.537ENSFALG00000000543PABPC410085.537Ficedula_albicollis
ENSRNOG00000028592AABR07035074.110093.636ENSFDAG00000020016-10093.636Fukomys_damarensis
ENSRNOG00000028592AABR07035074.19065.032ENSFDAG00000010581-10061.005Fukomys_damarensis
ENSRNOG00000028592AABR07035074.110079.326ENSFHEG00000007548pabpc410080.000Fundulus_heteroclitus
ENSRNOG00000028592AABR07035074.110078.593ENSGMOG00000019025pabpc410078.135Gadus_morhua
ENSRNOG00000028592AABR07035074.19986.003ENSGALG00000003800PABPC410086.003Gallus_gallus
ENSRNOG00000028592AABR07035074.19987.028ENSGAFG00000018195pabpc49891.667Gambusia_affinis
ENSRNOG00000028592AABR07035074.110077.948ENSGACG00000007179pabpc410078.473Gasterosteus_aculeatus
ENSRNOG00000028592AABR07035074.19985.848ENSGAGG00000001888PABPC410085.848Gopherus_agassizii
ENSRNOG00000028592AABR07035074.110093.485ENSGGOG00000004002PABPC410093.485Gorilla_gorilla
ENSRNOG00000028592AABR07035074.110079.326ENSHBUG00000020206pabpc410079.939Haplochromis_burtoni
ENSRNOG00000028592AABR07035074.110096.118ENSHGLG00000011162PABPC410096.118Heterocephalus_glaber_female
ENSRNOG00000028592AABR07035074.110096.118ENSHGLG00100001580PABPC410096.118Heterocephalus_glaber_male
ENSRNOG00000028592AABR07035074.110078.374ENSHCOG00000012694pabpc410078.560Hippocampus_comes
ENSRNOG00000028592AABR07035074.19878.931ENSIPUG00000016620pabpc49978.221Ictalurus_punctatus
ENSRNOG00000028592AABR07035074.110095.963ENSSTOG00000010416PABPC410095.963Ictidomys_tridecemlineatus
ENSRNOG00000028592AABR07035074.110093.313ENSJJAG00000007781Pabpc410093.313Jaculus_jaculus
ENSRNOG00000028592AABR07035074.19979.012ENSKMAG00000013597pabpc49979.199Kryptolebias_marmoratus
ENSRNOG00000028592AABR07035074.110078.354ENSLBEG00000013654pabpc410078.691Labrus_bergylta
ENSRNOG00000028592AABR07035074.19982.998ENSLACG00000011907PABPC410082.998Latimeria_chalumnae
ENSRNOG00000028592AABR07035074.19981.019ENSLOCG00000001877pabpc49980.734Lepisosteus_oculatus
ENSRNOG00000028592AABR07035074.110093.485ENSLAFG00000000151PABPC410093.485Loxodonta_africana
ENSRNOG00000028592AABR07035074.110093.636ENSMFAG00000041481PABPC410093.636Macaca_fascicularis
ENSRNOG00000028592AABR07035074.110093.636ENSMMUG00000007497PABPC410093.636Macaca_mulatta
ENSRNOG00000028592AABR07035074.110093.485ENSMNEG00000043054PABPC410093.485Macaca_nemestrina
ENSRNOG00000028592AABR07035074.110093.636ENSMLEG00000040716PABPC410093.636Mandrillus_leucophaeus
ENSRNOG00000028592AABR07035074.19979.193ENSMAMG00000010025pabpc49979.109Mastacembelus_armatus
ENSRNOG00000028592AABR07035074.110079.020ENSMZEG00005006141pabpc410079.632Maylandia_zebra
ENSRNOG00000028592AABR07035074.19984.524ENSMGAG00000005408PABPC410084.524Meleagris_gallopavo
ENSRNOG00000028592AABR07035074.15677.193ENSMAUG00000004089-9277.193Mesocricetus_auratus
ENSRNOG00000028592AABR07035074.174100.000ENSMAUG00000019763-8496.262Mesocricetus_auratus
ENSRNOG00000028592AABR07035074.16887.019ENSMAUG00000001295-9787.019Mesocricetus_auratus
ENSRNOG00000028592AABR07035074.19978.584ENSMICG00000036729-9780.944Microcebus_murinus
ENSRNOG00000028592AABR07035074.18993.217ENSMICG00000016633-10093.391Microcebus_murinus
ENSRNOG00000028592AABR07035074.19993.731ENSMOCG00000006763Pabpc49993.182Microtus_ochrogaster
ENSRNOG00000028592AABR07035074.110076.651ENSMMOG00000002363pabpc410077.147Mola_mola
ENSRNOG00000028592AABR07035074.19885.116ENSMODG00000017657-10084.779Monodelphis_domestica
ENSRNOG00000028592AABR07035074.15971.875ENSMODG00000018051-9171.875Monodelphis_domestica
ENSRNOG00000028592AABR07035074.19978.483ENSMALG00000011017pabpc410078.473Monopterus_albus
ENSRNOG00000028592AABR07035074.110093.939MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSRNOG00000028592AABR07035074.19983.391MGP_CAROLIEiJ_G0024864-10083.391Mus_caroli
ENSRNOG00000028592AABR07035074.110096.273ENSMUSG00000011257Pabpc410096.273Mus_musculus
ENSRNOG00000028592AABR07035074.19993.548MGP_PahariEiJ_G0028765Pabpc410096.454Mus_pahari
ENSRNOG00000028592AABR07035074.19975.632MGP_SPRETEiJ_G0027415Pabpc410095.745Mus_spretus
ENSRNOG00000028592AABR07035074.110093.636ENSMPUG00000014414-10093.636Mustela_putorius_furo
ENSRNOG00000028592AABR07035074.19549.675ENSMPUG00000006836-10049.513Mustela_putorius_furo
ENSRNOG00000028592AABR07035074.110091.460ENSMLUG00000012068PABPC410091.460Myotis_lucifugus
ENSRNOG00000028592AABR07035074.110095.963ENSNGAG00000018292Pabpc410095.963Nannospalax_galili
ENSRNOG00000028592AABR07035074.15888.942ENSNBRG00000009708pabpc49888.942Neolamprologus_brichardi
ENSRNOG00000028592AABR07035074.16583.051ENSNBRG00000010047-7583.051Neolamprologus_brichardi
ENSRNOG00000028592AABR07035074.110095.963ENSNLEG00000011928PABPC410095.963Nomascus_leucogenys
ENSRNOG00000028592AABR07035074.18395.238ENSOPRG00000011984PABPC48695.238Ochotona_princeps
ENSRNOG00000028592AABR07035074.110093.030ENSODEG00000006592-10093.030Octodon_degus
ENSRNOG00000028592AABR07035074.15182.734ENSODEG00000013457-9982.734Octodon_degus
ENSRNOG00000028592AABR07035074.19983.778ENSODEG00000017434-10083.778Octodon_degus
ENSRNOG00000028592AABR07035074.110079.326ENSONIG00000008176pabpc410079.939Oreochromis_niloticus
ENSRNOG00000028592AABR07035074.19985.848ENSOANG00000010001PABPC410085.848Ornithorhynchus_anatinus
ENSRNOG00000028592AABR07035074.19693.038ENSOCUG00000000562PABPC48893.038Oryctolagus_cuniculus
ENSRNOG00000028592AABR07035074.19987.037ENSORLG00000017479pabpc49987.037Oryzias_latipes
ENSRNOG00000028592AABR07035074.19987.037ENSORLG00020018644pabpc49987.037Oryzias_latipes_hni
ENSRNOG00000028592AABR07035074.19987.037ENSORLG00015015042pabpc49987.037Oryzias_latipes_hsok
ENSRNOG00000028592AABR07035074.19979.627ENSOMEG00000014410pabpc49981.416Oryzias_melastigma
ENSRNOG00000028592AABR07035074.110094.590ENSOGAG00000004067PABPC410094.745Otolemur_garnettii
ENSRNOG00000028592AABR07035074.110093.636ENSOARG00000020060PABPC410093.636Ovis_aries
ENSRNOG00000028592AABR07035074.110093.485ENSPPAG00000043625PABPC410093.485Pan_paniscus
ENSRNOG00000028592AABR07035074.110093.636ENSPPRG00000024727PABPC410093.636Panthera_pardus
ENSRNOG00000028592AABR07035074.110093.636ENSPTIG00000005829PABPC410093.636Panthera_tigris_altaica
ENSRNOG00000028592AABR07035074.110093.485ENSPTRG00000000573PABPC410093.485Pan_troglodytes
ENSRNOG00000028592AABR07035074.110093.788ENSPANG00000009484PABPC410093.788Papio_anubis
ENSRNOG00000028592AABR07035074.19980.495ENSPKIG00000025356pabpc49980.277Paramormyrops_kingsleyae
ENSRNOG00000028592AABR07035074.19986.003ENSPSIG00000016892PABPC410086.003Pelodiscus_sinensis
ENSRNOG00000028592AABR07035074.110077.280ENSPMGG00000009073pabpc49977.196Periophthalmus_magnuspinnatus
ENSRNOG00000028592AABR07035074.110093.030ENSPEMG00000023569-9993.030Peromyscus_maniculatus_bairdii
ENSRNOG00000028592AABR07035074.110091.460ENSPEMG00000024193-9991.460Peromyscus_maniculatus_bairdii
ENSRNOG00000028592AABR07035074.18969.492ENSPMAG00000002836pabpc410070.169Petromyzon_marinus
ENSRNOG00000028592AABR07035074.19568.064ENSPMAG00000007885pabpc49967.118Petromyzon_marinus
ENSRNOG00000028592AABR07035074.19890.215ENSPCIG00000020674PABPC410090.000Phascolarctos_cinereus
ENSRNOG00000028592AABR07035074.110078.714ENSPFOG00000002682pabpc410079.695Poecilia_formosa
ENSRNOG00000028592AABR07035074.110078.560ENSPLAG00000010112pabpc410079.695Poecilia_latipinna
ENSRNOG00000028592AABR07035074.19979.005ENSPMEG00000019739pabpc410079.695Poecilia_mexicana
ENSRNOG00000028592AABR07035074.110079.020ENSPREG00000001589pabpc410079.695Poecilia_reticulata
ENSRNOG00000028592AABR07035074.110093.485ENSPPYG00000001506PABPC410093.485Pongo_abelii
ENSRNOG00000028592AABR07035074.110088.788ENSPCAG00000003341PABPC410088.788Procavia_capensis
ENSRNOG00000028592AABR07035074.110092.890ENSPCOG00000023725-10093.041Propithecus_coquereli
ENSRNOG00000028592AABR07035074.18393.069ENSPCOG00000025882-9593.069Propithecus_coquereli
ENSRNOG00000028592AABR07035074.19992.941ENSPVAG00000002187PABPC410092.941Pteropus_vampyrus
ENSRNOG00000028592AABR07035074.110079.173ENSPNYG00000006134pabpc410079.786Pundamilia_nyererei
ENSRNOG00000028592AABR07035074.110079.052ENSPNAG00000024355pabpc410079.294Pygocentrus_nattereri
ENSRNOG00000028592AABR07035074.110093.636ENSRBIG00000039761PABPC410093.636Rhinopithecus_bieti
ENSRNOG00000028592AABR07035074.110093.636ENSRROG00000033355PABPC410093.636Rhinopithecus_roxellana
ENSRNOG00000028592AABR07035074.110093.485ENSSBOG00000026193PABPC410093.485Saimiri_boliviensis_boliviensis
ENSRNOG00000028592AABR07035074.19886.529ENSSHAG00000018139PABPC410086.159Sarcophilus_harrisii
ENSRNOG00000028592AABR07035074.19981.190ENSSFOG00015023514pabpc49981.090Scleropages_formosus
ENSRNOG00000028592AABR07035074.19978.605ENSSMAG00000009007pabpc49979.012Scophthalmus_maximus
ENSRNOG00000028592AABR07035074.19985.882ENSSDUG00000012683pabpc410078.931Seriola_dumerili
ENSRNOG00000028592AABR07035074.19978.882ENSSLDG00000013025pabpc410078.931Seriola_lalandi_dorsalis
ENSRNOG00000028592AABR07035074.110086.515ENSSARG00000000310PABPC410086.515Sorex_araneus
ENSRNOG00000028592AABR07035074.19985.226ENSSPUG00000003204PABPC410085.162Sphenodon_punctatus
ENSRNOG00000028592AABR07035074.19986.742ENSSPAG00000009252pabpc410086.547Stegastes_partitus
ENSRNOG00000028592AABR07035074.18951.127ENSSSCG00000036170-9651.127Sus_scrofa
ENSRNOG00000028592AABR07035074.110093.788ENSSSCG00000003660-10093.788Sus_scrofa
ENSRNOG00000028592AABR07035074.19983.333ENSTGUG00000001266PABPC410083.333Taeniopygia_guttata
ENSRNOG00000028592AABR07035074.110078.274ENSTRUG00000005907pabpc49978.891Takifugu_rubripes
ENSRNOG00000028592AABR07035074.110075.000ENSTNIG00000016902pabpc49974.691Tetraodon_nigroviridis
ENSRNOG00000028592AABR07035074.19982.828ENSTBEG00000009035PABPC410082.828Tupaia_belangeri
ENSRNOG00000028592AABR07035074.19978.161ENSTTRG00000014340PABPC410081.849Tursiops_truncatus
ENSRNOG00000028592AABR07035074.110093.636ENSUAMG00000000303PABPC410093.636Ursus_americanus
ENSRNOG00000028592AABR07035074.110093.333ENSUMAG00000019585PABPC49998.113Ursus_maritimus
ENSRNOG00000028592AABR07035074.18395.312ENSVPAG00000010041PABPC46895.312Vicugna_pacos
ENSRNOG00000028592AABR07035074.110093.485ENSVVUG00000005215PABPC410093.485Vulpes_vulpes
ENSRNOG00000028592AABR07035074.19978.227ENSXETG00000010946pabpc410078.227Xenopus_tropicalis
ENSRNOG00000028592AABR07035074.15693.452ENSXETG00000027221-10093.452Xenopus_tropicalis
ENSRNOG00000028592AABR07035074.19986.234ENSXCOG00000013190pabpc49686.792Xiphophorus_couchianus
ENSRNOG00000028592AABR07035074.110079.020ENSXMAG00000019007pabpc410079.695Xiphophorus_maculatus

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