EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000028913 (Gene tree)
Gene ID: -
Gene Symbol: AABR07028872.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 1225 bases
Position: chr17:89452814-89454038
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000055554	RIO1	PF01163.22	5.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000058760	AABR07028872.1-201	939	-	ENSRNOP00000055554	313 (aa)	-	F1LTP9

Gene Model

Click here to download ENSRNOG00000028913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000028913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000028913	AABR07028872.1	92	33.103	ENSRNOG00000030145	RGD1561667	57	33.103
ENSRNOG00000028913	AABR07028872.1	82	30.292	ENSRNOG00000017332	Dapk2	73	30.292
ENSRNOG00000028913	AABR07028872.1	90	37.544	ENSRNOG00000052093	Smok2a	56	37.544
ENSRNOG00000028913	AABR07028872.1	82	39.922	ENSRNOG00000048230	AABR07056118.1	93	39.922
ENSRNOG00000028913	AABR07028872.1	90	37.544	ENSRNOG00000059551	RGD1560718	56	37.544
ENSRNOG00000028913	AABR07028872.1	82	39.922	ENSRNOG00000051596	AABR07056131.1	93	39.922
ENSRNOG00000028913	AABR07028872.1	84	37.786	ENSRNOG00000025799	RGD1560303	53	37.786
ENSRNOG00000028913	AABR07028872.1	93	39.057	ENSRNOG00000024200	LOC690235	59	39.057

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000028913	AABR07028872.1	93	38.095	ENSBTAG00000052622	-	93	38.095	Bos_taurus
ENSRNOG00000028913	AABR07028872.1	84	37.970	ENSCPOG00000034310	-	81	37.970	Cavia_porcellus
ENSRNOG00000028913	AABR07028872.1	83	39.015	ENSCING00000008201	-	80	39.015	Ciona_intestinalis
ENSRNOG00000028913	AABR07028872.1	91	37.895	ENSCGRG00001007918	-	59	37.895	Cricetulus_griseus_chok1gshd
ENSRNOG00000028913	AABR07028872.1	90	36.879	ENSCGRG00001010553	-	57	36.879	Cricetulus_griseus_chok1gshd
ENSRNOG00000028913	AABR07028872.1	90	37.456	ENSCGRG00001006023	Gm4922	57	37.456	Cricetulus_griseus_chok1gshd
ENSRNOG00000028913	AABR07028872.1	90	37.456	ENSCGRG00000009530	Gm4922	57	37.456	Cricetulus_griseus_crigri
ENSRNOG00000028913	AABR07028872.1	84	36.090	ENSFDAG00000016208	-	64	35.986	Fukomys_damarensis
ENSRNOG00000028913	AABR07028872.1	90	38.028	MGP_CAROLIEiJ_G0021082	-	58	38.028	Mus_caroli
ENSRNOG00000028913	AABR07028872.1	90	38.028	MGP_CAROLIEiJ_G0021081	-	58	38.028	Mus_caroli
ENSRNOG00000028913	AABR07028872.1	90	38.028	MGP_CAROLIEiJ_G0021080	-	58	38.028	Mus_caroli
ENSRNOG00000028913	AABR07028872.1	90	36.014	MGP_CAROLIEiJ_G0015144	Gm4922	56	36.014	Mus_caroli
ENSRNOG00000028913	AABR07028872.1	90	38.028	MGP_CAROLIEiJ_G0021079	-	58	38.028	Mus_caroli
ENSRNOG00000028913	AABR07028872.1	93	35.959	ENSMUSG00000079156	Smok3b	58	35.959	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	89	62.989	ENSMUSG00000094682	Gm6902	93	62.989	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	89	62.989	ENSMUSG00000095190	Gm10668	93	62.989	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	89	62.633	ENSMUSG00000109060	Gm4513	93	62.633	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	95	63.087	ENSMUSG00000109516	Gm6882	95	63.087	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	95	62.752	ENSMUSG00000095683	Gm10662	95	62.752	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	93	35.959	ENSMUSG00000075599	Smok3a	58	35.959	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	92	36.207	ENSMUSG00000075598	Smok3c	57	36.207	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	89	62.633	ENSMUSG00000096283	Gm6176	93	62.633	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	95	62.752	ENSMUSG00000095976	Gm5891	95	62.752	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	89	63.701	ENSMUSG00000101436	Gm5157	93	63.701	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	93	36.986	ENSMUSG00000073458	Smok2a	58	36.986	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	90	37.676	ENSMUSG00000073457	Smok2b	58	37.676	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	98	33.974	ENSMUSG00000044624	Gm4922	59	33.974	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	90	34.266	ENSMUSG00000067941	Gm7168	60	33.333	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	90	34.615	ENSMUSG00000101307	Gm7358	60	33.657	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	89	62.633	ENSMUSG00000109396	Gm4565	93	62.633	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	90	34.615	ENSMUSG00000101361	Gm7356	60	33.657	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	89	62.989	ENSMUSG00000095363	Gm4567	93	62.989	Mus_musculus
ENSRNOG00000028913	AABR07028872.1	90	36.299	MGP_PahariEiJ_G0023763	Gm4922	57	36.299	Mus_pahari
ENSRNOG00000028913	AABR07028872.1	90	35.540	MGP_SPRETEiJ_G0015952	Gm4922	57	35.540	Mus_spretus
ENSRNOG00000028913	AABR07028872.1	90	39.085	ENSNGAG00000008026	-	56	39.085	Nannospalax_galili
ENSRNOG00000028913	AABR07028872.1	80	36.653	ENSOGAG00000033945	-	93	36.328	Otolemur_garnettii
ENSRNOG00000028913	AABR07028872.1	92	36.458	ENSPEMG00000022024	-	72	36.396	Peromyscus_maniculatus_bairdii