EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000029147 (Gene tree)
Gene ID: 288321
Gene Symbol: Rbm11
Alias: LOC288321
Full Name: RNA binding motif protein 11
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 9231 bases
Position: chr11:14005732-14014962
Accession: 1305195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000046624	RRM_1	PF00076.22	6.4e-15	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000047240	-	1853	XM_006247994	ENSRNOP00000046624	238 (aa)	XP_006248056	D3ZQ24

Gene Model

Click here to download ENSRNOG00000029147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000029147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000029147	Rbm11	95	68.519	ENSG00000185272	RBM11	71	84.000	Homo_sapiens
ENSRNOG00000029147	Rbm11	95	79.574	ENSAMEG00000014371	RBM11	96	79.574	Ailuropoda_melanoleuca
ENSRNOG00000029147	Rbm11	63	45.395	ENSAOCG00000004178	rbm7	58	45.395	Amphiprion_ocellaris
ENSRNOG00000029147	Rbm11	63	45.395	ENSAPEG00000021981	rbm7	58	45.395	Amphiprion_percula
ENSRNOG00000029147	Rbm11	95	80.176	ENSANAG00000034350	RBM11	100	79.832	Aotus_nancymaae
ENSRNOG00000029147	Rbm11	73	39.674	ENSACLG00000001203	rbm7	69	39.674	Astatotilapia_calliptera
ENSRNOG00000029147	Rbm11	99	75.918	ENSBTAG00000034347	RBM11	67	76.824	Bos_taurus
ENSRNOG00000029147	Rbm11	95	79.736	ENSCJAG00000003218	RBM11	100	79.412	Callithrix_jacchus
ENSRNOG00000029147	Rbm11	95	80.617	ENSCAFG00000030228	RBM11	95	80.617	Canis_familiaris
ENSRNOG00000029147	Rbm11	95	80.617	ENSCAFG00020026541	RBM11	95	80.617	Canis_lupus_dingo
ENSRNOG00000029147	Rbm11	99	74.694	ENSCHIG00000019134	RBM11	96	75.319	Capra_hircus
ENSRNOG00000029147	Rbm11	95	80.176	ENSTSYG00000003871	RBM11	100	80.252	Carlito_syrichta
ENSRNOG00000029147	Rbm11	82	66.154	ENSCAPG00000013590	RBM11	94	66.154	Cavia_aperea
ENSRNOG00000029147	Rbm11	95	70.925	ENSCPOG00000005309	RBM11	95	70.925	Cavia_porcellus
ENSRNOG00000029147	Rbm11	97	78.355	ENSCCAG00000030608	RBM11	100	78.992	Cebus_capucinus
ENSRNOG00000029147	Rbm11	95	67.778	ENSCATG00000043433	RBM11	71	83.000	Cercocebus_atys
ENSRNOG00000029147	Rbm11	95	81.498	ENSCLAG00000005374	RBM11	100	81.092	Chinchilla_lanigera
ENSRNOG00000029147	Rbm11	89	77.358	ENSCHOG00000007826	RBM11	98	77.885	Choloepus_hoffmanni
ENSRNOG00000029147	Rbm11	90	55.411	ENSCPBG00000028340	RBM11	86	55.505	Chrysemys_picta_bellii
ENSRNOG00000029147	Rbm11	95	67.778	ENSCANG00000017645	RBM11	71	83.000	Colobus_angolensis_palliatus
ENSRNOG00000029147	Rbm11	80	75.130	ENSCANG00000027287	-	100	75.000	Colobus_angolensis_palliatus
ENSRNOG00000029147	Rbm11	95	86.344	ENSCGRG00001013426	Rbm11	95	86.344	Cricetulus_griseus_chok1gshd
ENSRNOG00000029147	Rbm11	83	84.848	ENSCGRG00000011040	Rbm11	80	84.848	Cricetulus_griseus_crigri
ENSRNOG00000029147	Rbm11	91	36.481	ENSDARG00000020841	rbm7	85	36.866	Danio_rerio
ENSRNOG00000029147	Rbm11	95	75.439	ENSDNOG00000044590	RBM11	87	78.947	Dasypus_novemcinctus
ENSRNOG00000029147	Rbm11	60	86.713	ENSDORG00000000801	Rbm11	100	86.713	Dipodomys_ordii
ENSRNOG00000029147	Rbm11	95	82.379	ENSEASG00005013619	RBM11	100	82.353	Equus_asinus_asinus
ENSRNOG00000029147	Rbm11	91	82.488	ENSECAG00000015417	RBM11	66	83.173	Equus_caballus
ENSRNOG00000029147	Rbm11	95	79.736	ENSFCAG00000018199	RBM11	100	79.832	Felis_catus
ENSRNOG00000029147	Rbm11	82	77.949	ENSFDAG00000012193	RBM11	100	77.670	Fukomys_damarensis
ENSRNOG00000029147	Rbm11	92	36.957	ENSGALG00000007017	RBM7	64	40.449	Gallus_gallus
ENSRNOG00000029147	Rbm11	90	55.895	ENSGALG00000044391	RBM11	89	55.895	Gallus_gallus
ENSRNOG00000029147	Rbm11	90	54.978	ENSGAGG00000010715	RBM11	84	55.046	Gopherus_agassizii
ENSRNOG00000029147	Rbm11	95	68.148	ENSGGOG00000025603	RBM11	71	83.500	Gorilla_gorilla
ENSRNOG00000029147	Rbm11	73	40.217	ENSHBUG00000004319	rbm7	69	40.217	Haplochromis_burtoni
ENSRNOG00000029147	Rbm11	95	77.974	ENSHGLG00000013951	RBM11	100	77.731	Heterocephalus_glaber_female
ENSRNOG00000029147	Rbm11	95	77.974	ENSHGLG00100007848	RBM11	100	77.731	Heterocephalus_glaber_male
ENSRNOG00000029147	Rbm11	95	77.974	ENSSTOG00000034273	RBM11	100	78.151	Ictidomys_tridecemlineatus
ENSRNOG00000029147	Rbm11	95	78.319	ENSJJAG00000019251	Rbm11	100	78.151	Jaculus_jaculus
ENSRNOG00000029147	Rbm11	67	40.116	ENSLBEG00000024902	rbm7	62	42.331	Labrus_bergylta
ENSRNOG00000029147	Rbm11	79	54.545	ENSLACG00000008381	-	79	54.545	Latimeria_chalumnae
ENSRNOG00000029147	Rbm11	95	76.652	ENSLAFG00000007082	RBM11	95	76.652	Loxodonta_africana
ENSRNOG00000029147	Rbm11	84	83.000	ENSMFAG00000039455	RBM11	71	83.000	Macaca_fascicularis
ENSRNOG00000029147	Rbm11	95	67.778	ENSMMUG00000020089	RBM11	71	83.000	Macaca_mulatta
ENSRNOG00000029147	Rbm11	95	67.778	ENSMNEG00000030940	RBM11	71	83.000	Macaca_nemestrina
ENSRNOG00000029147	Rbm11	95	67.778	ENSMLEG00000028823	RBM11	71	83.000	Mandrillus_leucophaeus
ENSRNOG00000029147	Rbm11	73	40.217	ENSMZEG00005013295	rbm7	69	40.217	Maylandia_zebra
ENSRNOG00000029147	Rbm11	95	88.053	ENSMAUG00000008588	Rbm11	95	88.106	Mesocricetus_auratus
ENSRNOG00000029147	Rbm11	95	81.938	ENSMICG00000037489	RBM11	100	81.933	Microcebus_murinus
ENSRNOG00000029147	Rbm11	95	84.141	ENSMOCG00000004302	Rbm11	100	83.613	Microtus_ochrogaster
ENSRNOG00000029147	Rbm11	63	43.791	ENSMALG00000010901	rbm7	56	43.791	Monopterus_albus
ENSRNOG00000029147	Rbm11	95	92.511	MGP_CAROLIEiJ_G0020874	Rbm11	95	92.511	Mus_caroli
ENSRNOG00000029147	Rbm11	95	92.070	ENSMUSG00000032940	Rbm11	100	92.017	Mus_musculus
ENSRNOG00000029147	Rbm11	95	90.308	MGP_PahariEiJ_G0016578	Rbm11	100	90.336	Mus_pahari
ENSRNOG00000029147	Rbm11	95	92.070	MGP_SPRETEiJ_G0021780	Rbm11	100	92.017	Mus_spretus
ENSRNOG00000029147	Rbm11	97	82.251	ENSMPUG00000010691	RBM11	98	82.819	Mustela_putorius_furo
ENSRNOG00000029147	Rbm11	87	77.674	ENSMLUG00000005721	RBM11	87	77.674	Myotis_lucifugus
ENSRNOG00000029147	Rbm11	95	77.093	ENSNGAG00000011146	Rbm11	100	77.311	Nannospalax_galili
ENSRNOG00000029147	Rbm11	73	40.761	ENSNBRG00000017104	rbm7	69	40.761	Neolamprologus_brichardi
ENSRNOG00000029147	Rbm11	95	67.037	ENSNLEG00000001741	RBM11	71	82.000	Nomascus_leucogenys
ENSRNOG00000029147	Rbm11	61	44.737	ENSONIG00000005369	rbm7	70	39.362	Oreochromis_niloticus
ENSRNOG00000029147	Rbm11	75	62.032	ENSOANG00000008231	-	89	61.692	Ornithorhynchus_anatinus
ENSRNOG00000029147	Rbm11	95	82.379	ENSOCUG00000010409	RBM11	100	81.933	Oryctolagus_cuniculus
ENSRNOG00000029147	Rbm11	84	81.910	ENSOGAG00000005760	RBM11	99	81.910	Otolemur_garnettii
ENSRNOG00000029147	Rbm11	99	75.510	ENSOARG00000016446	RBM11	96	76.170	Ovis_aries
ENSRNOG00000029147	Rbm11	95	68.519	ENSPPAG00000037461	RBM11	71	84.000	Pan_paniscus
ENSRNOG00000029147	Rbm11	95	80.176	ENSPPRG00000002935	RBM11	100	80.252	Panthera_pardus
ENSRNOG00000029147	Rbm11	95	79.736	ENSPTIG00000016278	RBM11	100	79.832	Panthera_tigris_altaica
ENSRNOG00000029147	Rbm11	95	68.519	ENSPTRG00000013786	RBM11	71	84.000	Pan_troglodytes
ENSRNOG00000029147	Rbm11	95	67.407	ENSPANG00000024393	RBM11	71	82.500	Papio_anubis
ENSRNOG00000029147	Rbm11	50	50.000	ENSPKIG00000016648	rbm7	51	50.000	Paramormyrops_kingsleyae
ENSRNOG00000029147	Rbm11	63	41.026	ENSPMGG00000001523	rbm7	91	55.556	Periophthalmus_magnuspinnatus
ENSRNOG00000029147	Rbm11	95	85.903	ENSPEMG00000016731	Rbm11	99	84.874	Peromyscus_maniculatus_bairdii
ENSRNOG00000029147	Rbm11	92	55.963	ENSPCIG00000013003	-	85	56.650	Phascolarctos_cinereus
ENSRNOG00000029147	Rbm11	95	68.148	ENSPPYG00000011285	RBM11	71	83.000	Pongo_abelii
ENSRNOG00000029147	Rbm11	60	86.014	ENSPCAG00000008368	-	100	86.014	Procavia_capensis
ENSRNOG00000029147	Rbm11	95	81.498	ENSPCOG00000024136	RBM11	100	81.513	Propithecus_coquereli
ENSRNOG00000029147	Rbm11	87	77.670	ENSPVAG00000013858	RBM11	100	77.670	Pteropus_vampyrus
ENSRNOG00000029147	Rbm11	73	40.217	ENSPNYG00000012084	rbm7	69	40.217	Pundamilia_nyererei
ENSRNOG00000029147	Rbm11	95	67.037	ENSRBIG00000036380	RBM11	71	82.000	Rhinopithecus_bieti
ENSRNOG00000029147	Rbm11	95	66.667	ENSRROG00000029863	RBM11	71	81.500	Rhinopithecus_roxellana
ENSRNOG00000029147	Rbm11	95	81.057	ENSSBOG00000029034	RBM11	100	78.992	Saimiri_boliviensis_boliviensis
ENSRNOG00000029147	Rbm11	92	49.027	ENSSHAG00000013296	-	89	49.174	Sarcophilus_harrisii
ENSRNOG00000029147	Rbm11	95	75.330	ENSSARG00000001717	RBM11	95	75.330	Sorex_araneus
ENSRNOG00000029147	Rbm11	97	52.632	ENSSPUG00000011684	RBM11	82	54.630	Sphenodon_punctatus
ENSRNOG00000029147	Rbm11	99	78.814	ENSSSCG00000037517	RBM11	96	79.736	Sus_scrofa
ENSRNOG00000029147	Rbm11	63	41.722	ENSTRUG00000020355	rbm7	58	41.722	Takifugu_rubripes
ENSRNOG00000029147	Rbm11	86	76.961	ENSTBEG00000004121	RBM11	94	79.167	Tupaia_belangeri
ENSRNOG00000029147	Rbm11	99	79.661	ENSTTRG00000007410	RBM11	96	80.617	Tursiops_truncatus
ENSRNOG00000029147	Rbm11	95	81.498	ENSUAMG00000027022	RBM11	100	81.513	Ursus_americanus
ENSRNOG00000029147	Rbm11	88	77.512	ENSVPAG00000000673	RBM11	95	78.000	Vicugna_pacos
ENSRNOG00000029147	Rbm11	95	80.176	ENSVVUG00000023818	RBM11	69	80.176	Vulpes_vulpes
ENSRNOG00000029147	Rbm11	95	44.672	ENSXETG00000005847	rbm11	87	45.089	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISO	Process
GO:0003727	single-stranded RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0008266	poly(U) RNA binding	-	IEA	Function
GO:0008266	poly(U) RNA binding	-	ISO	Function
GO:0016607	nuclear speck	-	IEA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0034599	cellular response to oxidative stress	-	IEA	Process
GO:0034599	cellular response to oxidative stress	-	ISO	Process
GO:0042803	protein homodimerization activity	-	IEA	Function
GO:0042803	protein homodimerization activity	-	ISO	Function