EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000029194 (Gene tree)
Gene ID: 367172
Gene Symbol: Dhx30
Alias: LOC367172|MGC109411
Full Name: DExH-box helicase 30
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 27493 bases
Position: chr8:118160299-118187791
Accession: 1308888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000069744	DEAD	PF00270.29	2.8e-06	1	1
ENSRNOP00000043896	DEAD	PF00270.29	2.9e-06	1	1
ENSRNOP00000069744	HA2	PF04408.23	6.9e-13	1	1
ENSRNOP00000043896	HA2	PF04408.23	7.2e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000084838	-	3796	XM_006243826	ENSRNOP00000069744	1169 (aa)	XP_006243888	A0A0G2JW51
ENSRNOT00000048764	-	3585	XM_006243831	ENSRNOP00000043896	1194 (aa)	XP_006243893	Q5BJS0

Gene Model

Click here to download ENSRNOG00000029194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000029194's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000029194	Dhx30	65	32.500	ENSRNOG00000002735	Dhx9	64	33.119
ENSRNOG00000029194	Dhx30	61	42.105	ENSRNOG00000039241	Ythdc2	52	47.236
ENSRNOG00000029194	Dhx30	63	33.611	ENSRNOG00000054272	Dhx57	69	32.890
ENSRNOG00000029194	Dhx30	64	33.820	ENSRNOG00000010369	Dhx29	55	35.000
ENSRNOG00000029194	Dhx30	62	36.434	ENSRNOG00000014599	Dhx36	73	37.281

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000029194	Dhx30	100	97.739	ENSG00000132153	DHX30	100	97.922	Homo_sapiens
ENSRNOG00000029194	Dhx30	97	48.527	ENSAPOG00000023675	dhx30	93	49.326	Acanthochromis_polyacanthus
ENSRNOG00000029194	Dhx30	99	98.095	ENSAMEG00000013112	DHX30	98	96.569	Ailuropoda_melanoleuca
ENSRNOG00000029194	Dhx30	81	53.798	ENSACIG00000017560	dhx30	84	55.260	Amphilophus_citrinellus
ENSRNOG00000029194	Dhx30	97	48.960	ENSAOCG00000017807	dhx30	90	48.843	Amphiprion_ocellaris
ENSRNOG00000029194	Dhx30	92	53.510	ENSAOCG00000021534	-	88	54.322	Amphiprion_ocellaris
ENSRNOG00000029194	Dhx30	92	52.632	ENSAPEG00000004418	dhx30	88	52.632	Amphiprion_percula
ENSRNOG00000029194	Dhx30	97	49.738	ENSATEG00000008254	dhx30	89	50.366	Anabas_testudineus
ENSRNOG00000029194	Dhx30	98	77.528	ENSAPLG00000015682	DHX30	99	77.528	Anas_platyrhynchos
ENSRNOG00000029194	Dhx30	98	75.643	ENSACAG00000017696	DHX30	98	75.729	Anolis_carolinensis
ENSRNOG00000029194	Dhx30	100	98.118	ENSANAG00000024810	DHX30	100	97.990	Aotus_nancymaae
ENSRNOG00000029194	Dhx30	97	48.691	ENSACLG00000020306	dhx30	89	54.176	Astatotilapia_calliptera
ENSRNOG00000029194	Dhx30	97	50.218	ENSAMXG00000014791	dhx30	83	56.229	Astyanax_mexicanus
ENSRNOG00000029194	Dhx30	100	97.776	ENSBTAG00000015833	DHX30	100	97.776	Bos_taurus
ENSRNOG00000029194	Dhx30	100	97.861	ENSCJAG00000002635	DHX30	100	97.739	Callithrix_jacchus
ENSRNOG00000029194	Dhx30	99	98.099	ENSCAFG00000013038	DHX30	99	98.230	Canis_familiaris
ENSRNOG00000029194	Dhx30	99	98.355	ENSCAFG00020020245	DHX30	100	98.355	Canis_lupus_dingo
ENSRNOG00000029194	Dhx30	99	97.407	ENSCHIG00000017619	DHX30	100	95.474	Capra_hircus
ENSRNOG00000029194	Dhx30	100	98.157	ENSTSYG00000005093	DHX30	100	98.268	Carlito_syrichta
ENSRNOG00000029194	Dhx30	100	93.212	ENSCAPG00000011764	DHX30	99	93.212	Cavia_aperea
ENSRNOG00000029194	Dhx30	100	97.406	ENSCPOG00000000699	DHX30	100	97.406	Cavia_porcellus
ENSRNOG00000029194	Dhx30	100	97.906	ENSCCAG00000032718	DHX30	100	98.009	Cebus_capucinus
ENSRNOG00000029194	Dhx30	100	97.906	ENSCATG00000043684	DHX30	100	98.009	Cercocebus_atys
ENSRNOG00000029194	Dhx30	100	97.487	ENSCLAG00000014660	DHX30	99	97.150	Chinchilla_lanigera
ENSRNOG00000029194	Dhx30	100	98.033	ENSCSAG00000015968	DHX30	100	98.033	Chlorocebus_sabaeus
ENSRNOG00000029194	Dhx30	100	92.714	ENSCHOG00000002900	DHX30	100	92.714	Choloepus_hoffmanni
ENSRNOG00000029194	Dhx30	98	77.187	ENSCPBG00000015231	DHX30	99	77.273	Chrysemys_picta_bellii
ENSRNOG00000029194	Dhx30	100	94.807	ENSCANG00000007441	DHX30	100	94.807	Colobus_angolensis_palliatus
ENSRNOG00000029194	Dhx30	100	99.497	ENSCGRG00001014229	Dhx30	98	99.570	Cricetulus_griseus_chok1gshd
ENSRNOG00000029194	Dhx30	100	99.497	ENSCGRG00000017808	Dhx30	98	99.570	Cricetulus_griseus_crigri
ENSRNOG00000029194	Dhx30	97	48.559	ENSCSEG00000009744	dhx30	86	54.597	Cynoglossus_semilaevis
ENSRNOG00000029194	Dhx30	89	53.501	ENSCVAG00000006410	dhx30	92	55.593	Cyprinodon_variegatus
ENSRNOG00000029194	Dhx30	97	49.260	ENSDARG00000077839	dhx30	87	54.951	Danio_rerio
ENSRNOG00000029194	Dhx30	99	92.308	ENSDNOG00000018833	DHX30	98	91.068	Dasypus_novemcinctus
ENSRNOG00000029194	Dhx30	100	98.325	ENSDORG00000028764	Dhx30	99	98.312	Dipodomys_ordii
ENSRNOG00000029194	Dhx30	80	50.554	ENSEBUG00000016505	dhx30	84	50.943	Eptatretus_burgeri
ENSRNOG00000029194	Dhx30	99	98.612	ENSEASG00005008553	DHX30	100	98.356	Equus_asinus_asinus
ENSRNOG00000029194	Dhx30	100	98.717	ENSECAG00000015670	DHX30	100	98.717	Equus_caballus
ENSRNOG00000029194	Dhx30	79	96.517	ENSEEUG00000010045	DHX30	85	96.517	Erinaceus_europaeus
ENSRNOG00000029194	Dhx30	98	50.259	ENSELUG00000020943	dhx30	90	51.037	Esox_lucius
ENSRNOG00000029194	Dhx30	100	98.157	ENSFCAG00000000438	DHX30	100	98.268	Felis_catus
ENSRNOG00000029194	Dhx30	98	76.661	ENSFALG00000002009	DHX30	99	77.074	Ficedula_albicollis
ENSRNOG00000029194	Dhx30	100	97.069	ENSFDAG00000007132	DHX30	100	96.988	Fukomys_damarensis
ENSRNOG00000029194	Dhx30	92	51.356	ENSFHEG00000014172	dhx30	89	51.543	Fundulus_heteroclitus
ENSRNOG00000029194	Dhx30	77	55.507	ENSGMOG00000008538	dhx30	81	57.528	Gadus_morhua
ENSRNOG00000029194	Dhx30	98	76.949	ENSGALG00000039830	DHX30	99	76.903	Gallus_gallus
ENSRNOG00000029194	Dhx30	98	49.957	ENSGAFG00000021403	dhx30	87	55.028	Gambusia_affinis
ENSRNOG00000029194	Dhx30	97	50.131	ENSGACG00000017828	dhx30	94	50.869	Gasterosteus_aculeatus
ENSRNOG00000029194	Dhx30	98	77.710	ENSGAGG00000008495	DHX30	99	77.574	Gopherus_agassizii
ENSRNOG00000029194	Dhx30	100	97.739	ENSGGOG00000004307	DHX30	100	97.835	Gorilla_gorilla
ENSRNOG00000029194	Dhx30	97	48.778	ENSHBUG00000006060	dhx30	92	49.634	Haplochromis_burtoni
ENSRNOG00000029194	Dhx30	100	96.491	ENSHGLG00000012643	DHX30	99	96.491	Heterocephalus_glaber_female
ENSRNOG00000029194	Dhx30	100	96.151	ENSHGLG00100011194	DHX30	99	96.151	Heterocephalus_glaber_male
ENSRNOG00000029194	Dhx30	89	54.772	ENSHCOG00000018612	dhx30	87	55.736	Hippocampus_comes
ENSRNOG00000029194	Dhx30	97	50.611	ENSIPUG00000012285	dhx30	92	50.663	Ictalurus_punctatus
ENSRNOG00000029194	Dhx30	100	98.660	ENSSTOG00000022367	DHX30	100	98.660	Ictidomys_tridecemlineatus
ENSRNOG00000029194	Dhx30	99	97.832	ENSJJAG00000007025	-	98	97.832	Jaculus_jaculus
ENSRNOG00000029194	Dhx30	97	49.343	ENSKMAG00000015124	dhx30	90	53.698	Kryptolebias_marmoratus
ENSRNOG00000029194	Dhx30	97	49.301	ENSLBEG00000016705	dhx30	84	54.889	Labrus_bergylta
ENSRNOG00000029194	Dhx30	67	63.889	ENSLACG00000009404	DHX30	96	63.985	Latimeria_chalumnae
ENSRNOG00000029194	Dhx30	97	55.448	ENSLOCG00000010283	dhx30	98	54.898	Lepisosteus_oculatus
ENSRNOG00000029194	Dhx30	99	96.889	ENSLAFG00000028880	DHX30	100	96.271	Loxodonta_africana
ENSRNOG00000029194	Dhx30	100	97.906	ENSMFAG00000033894	DHX30	100	98.009	Macaca_fascicularis
ENSRNOG00000029194	Dhx30	100	98.033	ENSMMUG00000003820	DHX30	100	98.033	Macaca_mulatta
ENSRNOG00000029194	Dhx30	100	97.906	ENSMNEG00000035478	DHX30	100	98.009	Macaca_nemestrina
ENSRNOG00000029194	Dhx30	100	97.739	ENSMLEG00000023203	DHX30	100	97.835	Mandrillus_leucophaeus
ENSRNOG00000029194	Dhx30	97	50.217	ENSMAMG00000014611	dhx30	85	55.629	Mastacembelus_armatus
ENSRNOG00000029194	Dhx30	97	48.908	ENSMZEG00005025092	dhx30	90	49.817	Maylandia_zebra
ENSRNOG00000029194	Dhx30	98	75.240	ENSMGAG00000001216	DHX30	100	74.221	Meleagris_gallopavo
ENSRNOG00000029194	Dhx30	99	99.578	ENSMAUG00000021404	Dhx30	99	99.494	Mesocricetus_auratus
ENSRNOG00000029194	Dhx30	100	98.157	ENSMICG00000008784	DHX30	100	98.268	Microcebus_murinus
ENSRNOG00000029194	Dhx30	100	99.581	ENSMOCG00000009984	Dhx30	99	99.581	Microtus_ochrogaster
ENSRNOG00000029194	Dhx30	88	54.334	ENSMMOG00000016828	dhx30	91	55.045	Mola_mola
ENSRNOG00000029194	Dhx30	99	94.651	ENSMODG00000014285	DHX30	95	94.022	Monodelphis_domestica
ENSRNOG00000029194	Dhx30	91	52.778	ENSMALG00000020479	dhx30	86	53.564	Monopterus_albus
ENSRNOG00000029194	Dhx30	99	99.309	MGP_CAROLIEiJ_G0032725	Dhx30	100	97.778	Mus_caroli
ENSRNOG00000029194	Dhx30	100	99.414	ENSMUSG00000032480	Dhx30	100	99.414	Mus_musculus
ENSRNOG00000029194	Dhx30	100	99.497	MGP_PahariEiJ_G0015592	Dhx30	100	99.497	Mus_pahari
ENSRNOG00000029194	Dhx30	100	99.330	MGP_SPRETEiJ_G0033873	Dhx30	100	99.330	Mus_spretus
ENSRNOG00000029194	Dhx30	100	98.157	ENSMPUG00000015013	DHX30	100	98.157	Mustela_putorius_furo
ENSRNOG00000029194	Dhx30	100	98.911	ENSNGAG00000023148	Dhx30	100	98.911	Nannospalax_galili
ENSRNOG00000029194	Dhx30	89	54.184	ENSNBRG00000012539	dhx30	89	55.249	Neolamprologus_brichardi
ENSRNOG00000029194	Dhx30	93	95.753	ENSNLEG00000006367	DHX30	99	95.753	Nomascus_leucogenys
ENSRNOG00000029194	Dhx30	100	94.891	ENSMEUG00000002926	DHX30	100	94.891	Notamacropus_eugenii
ENSRNOG00000029194	Dhx30	100	97.906	ENSOPRG00000017190	DHX30	100	97.906	Ochotona_princeps
ENSRNOG00000029194	Dhx30	100	96.985	ENSODEG00000012770	-	99	96.888	Octodon_degus
ENSRNOG00000029194	Dhx30	90	76.365	ENSODEG00000007220	-	95	74.494	Octodon_degus
ENSRNOG00000029194	Dhx30	97	50.087	ENSONIG00000009631	dhx30	94	51.144	Oreochromis_niloticus
ENSRNOG00000029194	Dhx30	99	81.558	ENSOANG00000010513	-	99	81.558	Ornithorhynchus_anatinus
ENSRNOG00000029194	Dhx30	99	98.012	ENSOCUG00000006515	DHX30	95	98.012	Oryctolagus_cuniculus
ENSRNOG00000029194	Dhx30	97	49.651	ENSORLG00000017276	dhx30	89	50.318	Oryzias_latipes
ENSRNOG00000029194	Dhx30	97	49.476	ENSORLG00020010224	dhx30	89	50.136	Oryzias_latipes_hni
ENSRNOG00000029194	Dhx30	97	49.346	ENSORLG00015010148	dhx30	91	49.250	Oryzias_latipes_hsok
ENSRNOG00000029194	Dhx30	97	48.482	ENSOMEG00000005351	dhx30	86	54.978	Oryzias_melastigma
ENSRNOG00000029194	Dhx30	99	97.753	ENSOGAG00000012526	DHX30	95	97.753	Otolemur_garnettii
ENSRNOG00000029194	Dhx30	80	98.295	ENSOARG00000002897	DHX30	96	98.295	Ovis_aries
ENSRNOG00000029194	Dhx30	100	94.724	ENSPPAG00000034330	DHX30	100	95.333	Pan_paniscus
ENSRNOG00000029194	Dhx30	100	98.157	ENSPPRG00000022811	DHX30	100	98.268	Panthera_pardus
ENSRNOG00000029194	Dhx30	93	95.434	ENSPTIG00000015582	DHX30	95	95.434	Panthera_tigris_altaica
ENSRNOG00000029194	Dhx30	100	97.822	ENSPTRG00000014877	DHX30	100	97.922	Pan_troglodytes
ENSRNOG00000029194	Dhx30	99	97.229	ENSPANG00000014291	DHX30	100	96.977	Papio_anubis
ENSRNOG00000029194	Dhx30	92	56.098	ENSPKIG00000000741	dhx30	88	57.430	Paramormyrops_kingsleyae
ENSRNOG00000029194	Dhx30	98	67.378	ENSPSIG00000011740	DHX30	99	66.163	Pelodiscus_sinensis
ENSRNOG00000029194	Dhx30	100	99.414	ENSPEMG00000014177	Dhx30	99	98.995	Peromyscus_maniculatus_bairdii
ENSRNOG00000029194	Dhx30	98	45.916	ENSPMAG00000001958	dhx30	100	45.916	Petromyzon_marinus
ENSRNOG00000029194	Dhx30	99	94.823	ENSPCIG00000013492	DHX30	91	94.193	Phascolarctos_cinereus
ENSRNOG00000029194	Dhx30	59	56.281	ENSPFOG00000015329	dhx30	88	56.281	Poecilia_formosa
ENSRNOG00000029194	Dhx30	89	54.008	ENSPMEG00000022750	dhx30	87	55.234	Poecilia_mexicana
ENSRNOG00000029194	Dhx30	89	53.806	ENSPREG00000010021	dhx30	90	55.226	Poecilia_reticulata
ENSRNOG00000029194	Dhx30	100	97.655	ENSPPYG00000013914	DHX30	100	97.655	Pongo_abelii
ENSRNOG00000029194	Dhx30	77	98.185	ENSPCAG00000002209	DHX30	74	98.185	Procavia_capensis
ENSRNOG00000029194	Dhx30	100	98.241	ENSPCOG00000025552	DHX30	100	98.355	Propithecus_coquereli
ENSRNOG00000029194	Dhx30	99	97.540	ENSPVAG00000010183	DHX30	100	97.540	Pteropus_vampyrus
ENSRNOG00000029194	Dhx30	81	54.079	ENSPNYG00000014217	dhx30	82	55.249	Pundamilia_nyererei
ENSRNOG00000029194	Dhx30	97	50.304	ENSPNAG00000002192	dhx30	91	54.209	Pygocentrus_nattereri
ENSRNOG00000029194	Dhx30	100	94.807	ENSRBIG00000034012	DHX30	100	94.807	Rhinopithecus_bieti
ENSRNOG00000029194	Dhx30	100	97.906	ENSRROG00000039143	DHX30	100	98.009	Rhinopithecus_roxellana
ENSRNOG00000029194	Dhx30	100	94.724	ENSSBOG00000035810	DHX30	100	94.724	Saimiri_boliviensis_boliviensis
ENSRNOG00000029194	Dhx30	100	95.059	ENSSHAG00000006980	DHX30	100	95.059	Sarcophilus_harrisii
ENSRNOG00000029194	Dhx30	98	49.869	ENSSFOG00015018714	dhx30	86	55.481	Scleropages_formosus
ENSRNOG00000029194	Dhx30	89	53.501	ENSSMAG00000020068	dhx30	86	54.465	Scophthalmus_maximus
ENSRNOG00000029194	Dhx30	98	49.826	ENSSDUG00000019188	dhx30	92	49.739	Seriola_dumerili
ENSRNOG00000029194	Dhx30	93	50.458	ENSSLDG00000008176	dhx30	98	50.409	Seriola_lalandi_dorsalis
ENSRNOG00000029194	Dhx30	99	75.339	ENSSPUG00000019160	DHX30	98	75.424	Sphenodon_punctatus
ENSRNOG00000029194	Dhx30	97	49.567	ENSSPAG00000022184	dhx30	86	54.107	Stegastes_partitus
ENSRNOG00000029194	Dhx30	100	97.861	ENSSSCG00000011342	DHX30	100	97.861	Sus_scrofa
ENSRNOG00000029194	Dhx30	98	77.826	ENSTGUG00000000112	-	99	77.913	Taeniopygia_guttata
ENSRNOG00000029194	Dhx30	85	62.626	ENSTRUG00000020111	DHX30	91	62.626	Takifugu_rubripes
ENSRNOG00000029194	Dhx30	98	47.064	ENSTRUG00000011263	dhx30	94	46.740	Takifugu_rubripes
ENSRNOG00000029194	Dhx30	99	49.482	ENSTNIG00000008523	dhx30	92	54.526	Tetraodon_nigroviridis
ENSRNOG00000029194	Dhx30	100	97.906	ENSTTRG00000002314	DHX30	100	97.906	Tursiops_truncatus
ENSRNOG00000029194	Dhx30	91	98.447	ENSUAMG00000017241	DHX30	100	98.447	Ursus_americanus
ENSRNOG00000029194	Dhx30	90	86.857	ENSUMAG00000001274	DHX30	93	85.988	Ursus_maritimus
ENSRNOG00000029194	Dhx30	93	97.619	ENSVVUG00000029792	DHX30	84	97.619	Vulpes_vulpes
ENSRNOG00000029194	Dhx30	98	57.872	ENSXETG00000004213	dhx30	98	57.818	Xenopus_tropicalis
ENSRNOG00000029194	Dhx30	92	52.823	ENSXCOG00000015021	dhx30	91	54.126	Xiphophorus_couchianus
ENSRNOG00000029194	Dhx30	97	49.912	ENSXMAG00000016336	dhx30	86	55.122	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002151	G-quadruplex RNA binding	21873635.	IBA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003682	chromatin binding	-	ISO	Function
GO:0003682	chromatin binding	-	ISS	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0003723	RNA binding	-	ISS	Function
GO:0003725	double-stranded RNA binding	-	IEA	Function
GO:0003725	double-stranded RNA binding	-	ISO	Function
GO:0004003	ATP-dependent DNA helicase activity	21873635.	IBA	Function
GO:0004004	ATP-dependent RNA helicase activity	-	ISO	Function
GO:0004004	ATP-dependent RNA helicase activity	-	ISS	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005515	protein binding	21204022.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005739	mitochondrion	-	ISS	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0007417	central nervous system development	-	ISO	Process
GO:0007417	central nervous system development	-	ISS	Process
GO:0032508	DNA duplex unwinding	-	IEA	Process
GO:0034459	ATP-dependent 3'-5' RNA helicase activity	21873635.	IBA	Function
GO:0035770	ribonucleoprotein granule	-	ISO	Component
GO:0035770	ribonucleoprotein granule	-	ISS	Component
GO:0042645	mitochondrial nucleoid	-	ISO	Component
GO:0042645	mitochondrial nucleoid	-	ISS	Component
GO:1902775	mitochondrial large ribosomal subunit assembly	-	ISO	Process
GO:1902775	mitochondrial large ribosomal subunit assembly	-	ISS	Process