EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000030145 (Gene tree)
Gene ID: 292393
Gene Symbol: RGD1561667
Alias: LOC308209
Full Name: similar to putative protein kinase
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 1837 bases
Position: chr1:55219773-55221609
Accession: 1561667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000042400	RIO1	PF01163.22	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000041610	-	1837	XM_003748704	ENSRNOP00000042400	509 (aa)	XP_003748752	F1M3Z2

Gene Model

Click here to download ENSRNOG00000030145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000030145's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000030145	RGD1561667	57	33.103	ENSRNOG00000028913	AABR07028872.1	92	33.103
ENSRNOG00000030145	RGD1561667	97	51.098	ENSRNOG00000024200	LOC690235	98	51.098
ENSRNOG00000030145	RGD1561667	96	50.204	ENSRNOG00000059551	RGD1560718	96	50.000
ENSRNOG00000030145	RGD1561667	56	31.970	ENSRNOG00000004362	Rps6ka5	70	31.970
ENSRNOG00000030145	RGD1561667	95	39.919	ENSRNOG00000025799	RGD1560303	99	39.417
ENSRNOG00000030145	RGD1561667	50	38.824	ENSRNOG00000051596	AABR07056131.1	91	38.824
ENSRNOG00000030145	RGD1561667	96	49.287	ENSRNOG00000052093	Smok2a	96	49.084
ENSRNOG00000030145	RGD1561667	50	38.431	ENSRNOG00000048230	AABR07056118.1	91	38.431

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000030145	RGD1561667	63	37.383	ENSCPOG00000033321	-	52	37.383	Cavia_porcellus
ENSRNOG00000030145	RGD1561667	62	37.107	ENSCPOG00000034310	-	96	37.107	Cavia_porcellus
ENSRNOG00000030145	RGD1561667	57	39.590	ENSCING00000008201	-	88	39.590	Ciona_intestinalis
ENSRNOG00000030145	RGD1561667	97	56.740	ENSCGRG00001010553	-	100	56.420	Cricetulus_griseus_chok1gshd
ENSRNOG00000030145	RGD1561667	99	52.381	ENSCGRG00001007918	-	100	52.381	Cricetulus_griseus_chok1gshd
ENSRNOG00000030145	RGD1561667	98	39.604	ENSCGRG00001006023	Gm4922	99	39.604	Cricetulus_griseus_chok1gshd
ENSRNOG00000030145	RGD1561667	98	39.604	ENSCGRG00000009530	Gm4922	99	39.604	Cricetulus_griseus_crigri
ENSRNOG00000030145	RGD1561667	70	36.872	ENSFDAG00000016208	-	77	37.429	Fukomys_damarensis
ENSRNOG00000030145	RGD1561667	96	47.959	MGP_CAROLIEiJ_G0021079	-	99	47.959	Mus_caroli
ENSRNOG00000030145	RGD1561667	96	47.959	MGP_CAROLIEiJ_G0021082	-	99	47.959	Mus_caroli
ENSRNOG00000030145	RGD1561667	96	47.959	MGP_CAROLIEiJ_G0021080	-	99	47.959	Mus_caroli
ENSRNOG00000030145	RGD1561667	99	39.423	MGP_CAROLIEiJ_G0015144	Gm4922	99	39.423	Mus_caroli
ENSRNOG00000030145	RGD1561667	96	47.959	MGP_CAROLIEiJ_G0021081	-	99	47.959	Mus_caroli
ENSRNOG00000030145	RGD1561667	99	46.365	ENSMUSG00000075599	Smok3a	99	46.365	Mus_musculus
ENSRNOG00000030145	RGD1561667	97	47.390	ENSMUSG00000075598	Smok3c	97	47.390	Mus_musculus
ENSRNOG00000030145	RGD1561667	57	37.457	ENSMUSG00000095976	Gm5891	92	37.457	Mus_musculus
ENSRNOG00000030145	RGD1561667	51	38.697	ENSMUSG00000096283	Gm6176	86	38.697	Mus_musculus
ENSRNOG00000030145	RGD1561667	51	38.697	ENSMUSG00000109396	Gm4565	86	38.697	Mus_musculus
ENSRNOG00000030145	RGD1561667	51	39.080	ENSMUSG00000094682	Gm6902	86	39.080	Mus_musculus
ENSRNOG00000030145	RGD1561667	95	59.714	ENSMUSG00000101307	Gm7358	100	59.766	Mus_musculus
ENSRNOG00000030145	RGD1561667	51	38.697	ENSMUSG00000109060	Gm4513	86	38.697	Mus_musculus
ENSRNOG00000030145	RGD1561667	57	36.897	ENSMUSG00000109516	Gm6882	92	36.897	Mus_musculus
ENSRNOG00000030145	RGD1561667	96	58.537	ENSMUSG00000067941	Gm7168	100	58.789	Mus_musculus
ENSRNOG00000030145	RGD1561667	51	39.080	ENSMUSG00000095363	Gm4567	86	39.080	Mus_musculus
ENSRNOG00000030145	RGD1561667	99	46.365	ENSMUSG00000079156	Smok3b	99	46.365	Mus_musculus
ENSRNOG00000030145	RGD1561667	57	37.457	ENSMUSG00000095683	Gm10662	92	37.457	Mus_musculus
ENSRNOG00000030145	RGD1561667	100	38.506	ENSMUSG00000044624	Gm4922	100	38.506	Mus_musculus
ENSRNOG00000030145	RGD1561667	96	60.163	ENSMUSG00000101361	Gm7356	100	60.352	Mus_musculus
ENSRNOG00000030145	RGD1561667	96	48.374	ENSMUSG00000073457	Smok2b	99	48.374	Mus_musculus
ENSRNOG00000030145	RGD1561667	97	48.193	ENSMUSG00000073458	Smok2a	97	48.193	Mus_musculus
ENSRNOG00000030145	RGD1561667	51	39.080	ENSMUSG00000095190	Gm10668	86	39.080	Mus_musculus
ENSRNOG00000030145	RGD1561667	51	38.314	ENSMUSG00000101436	Gm5157	86	38.314	Mus_musculus
ENSRNOG00000030145	RGD1561667	97	38.538	MGP_PahariEiJ_G0023763	Gm4922	100	37.931	Mus_pahari
ENSRNOG00000030145	RGD1561667	100	39.223	MGP_SPRETEiJ_G0015952	Gm4922	100	39.223	Mus_spretus
ENSRNOG00000030145	RGD1561667	100	49.130	ENSNGAG00000008026	-	100	49.130	Nannospalax_galili
ENSRNOG00000030145	RGD1561667	99	50.489	ENSPEMG00000022024	-	98	56.072	Peromyscus_maniculatus_bairdii

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006468	protein phosphorylation	21873635.	IBA	Process
GO:0035556	intracellular signal transduction	21873635.	IBA	Process