EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000030157 (Gene tree)
Gene ID: 294232
Gene Symbol: Dhx16
Alias: Dbp2|Ddx16
Full Name: DEAH-box helicase 16
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 18957 bases
Position: chr20:3367150-3386106
Accession: 1302963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000062603	DEAD	PF00270.29	4.3e-07	1	1
ENSRNOP00000072216	DEAD	PF00270.29	5.4e-07	1	1
ENSRNOP00000062603	HA2	PF04408.23	4e-20	1	1
ENSRNOP00000072216	HA2	PF04408.23	7.2e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000080770	-	756	-	ENSRNOP00000075570	209 (aa)	-	A0A0G2KAY1
ENSRNOT00000089550	-	2603	-	ENSRNOP00000072216	835 (aa)	-	A0A0G2K2E8
ENSRNOT00000065025	-	5197	-	ENSRNOP00000062603	1044 (aa)	-	Q6MG13

Gene Model

Click here to download ENSRNOG00000030157's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000030157's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000030157	Dhx16	61	42.012	ENSRNOG00000004549	Dhx40	86	42.012
ENSRNOG00000030157	Dhx16	61	45.859	ENSRNOG00000007054	Dhx33	93	45.859
ENSRNOG00000030157	Dhx16	60	58.954	ENSRNOG00000020772	Dhx8	52	58.954
ENSRNOG00000030157	Dhx16	59	32.148	ENSRNOG00000018119	Dhx32	85	32.148
ENSRNOG00000030157	Dhx16	67	49.644	ENSRNOG00000014619	Dhx38	57	48.892
ENSRNOG00000030157	Dhx16	52	38.739	ENSRNOG00000002735	Dhx9	51	30.706
ENSRNOG00000030157	Dhx16	53	39.348	ENSRNOG00000047575	Dhx34	50	37.925
ENSRNOG00000030157	Dhx16	61	52.623	ENSRNOG00000003844	Dhx15	81	52.550
ENSRNOG00000030157	Dhx16	60	42.510	ENSRNOG00000022171	Dhx37	62	40.441
ENSRNOG00000030157	Dhx16	59	33.231	ENSRNOG00000008062	Dqx1	89	33.180
ENSRNOG00000030157	Dhx16	60	48.758	ENSRNOG00000015928	Dhx35	91	48.758
ENSRNOG00000030157	Dhx16	56	42.564	ENSRNOG00000014599	Dhx36	62	42.564

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000030157	Dhx16	100	95.885	ENSG00000204560	DHX16	100	95.885	Homo_sapiens
ENSRNOG00000030157	Dhx16	100	68.910	ENSAPOG00000008825	dhx16	99	69.172	Acanthochromis_polyacanthus
ENSRNOG00000030157	Dhx16	100	95.502	ENSAMEG00000013213	DHX16	100	95.694	Ailuropoda_melanoleuca
ENSRNOG00000030157	Dhx16	99	72.296	ENSACIG00000021825	dhx16	99	72.753	Amphilophus_citrinellus
ENSRNOG00000030157	Dhx16	99	72.322	ENSAOCG00000024217	dhx16	99	71.766	Amphiprion_ocellaris
ENSRNOG00000030157	Dhx16	99	69.639	ENSAPEG00000022508	dhx16	99	70.029	Amphiprion_percula
ENSRNOG00000030157	Dhx16	99	72.391	ENSATEG00000006665	dhx16	99	72.450	Anabas_testudineus
ENSRNOG00000030157	Dhx16	99	75.355	ENSACAG00000010952	DHX16	99	74.692	Anolis_carolinensis
ENSRNOG00000030157	Dhx16	93	96.111	ENSANAG00000024212	DHX16	100	96.111	Aotus_nancymaae
ENSRNOG00000030157	Dhx16	99	72.417	ENSACLG00000010932	dhx16	99	74.017	Astatotilapia_calliptera
ENSRNOG00000030157	Dhx16	99	72.581	ENSAMXG00000005181	dhx16	99	72.529	Astyanax_mexicanus
ENSRNOG00000030157	Dhx16	100	95.129	ENSBTAG00000006960	DHX16	100	95.129	Bos_taurus
ENSRNOG00000030157	Dhx16	99	54.728	WBGene00003392	mog-4	99	54.337	Caenorhabditis_elegans
ENSRNOG00000030157	Dhx16	100	95.507	ENSCJAG00000019914	DHX16	100	95.411	Callithrix_jacchus
ENSRNOG00000030157	Dhx16	100	95.120	ENSCAFG00000000427	DHX16	100	95.311	Canis_familiaris
ENSRNOG00000030157	Dhx16	100	94.641	ENSCAFG00020017623	DHX16	100	94.833	Canis_lupus_dingo
ENSRNOG00000030157	Dhx16	100	93.868	ENSCHIG00000013356	DHX16	100	93.868	Capra_hircus
ENSRNOG00000030157	Dhx16	100	95.885	ENSTSYG00000029805	DHX16	98	97.948	Carlito_syrichta
ENSRNOG00000030157	Dhx16	94	94.274	ENSCAPG00000000092	DHX16	97	94.376	Cavia_aperea
ENSRNOG00000030157	Dhx16	100	94.163	ENSCPOG00000015415	DHX16	100	94.258	Cavia_porcellus
ENSRNOG00000030157	Dhx16	100	95.411	ENSCCAG00000025435	DHX16	100	95.315	Cebus_capucinus
ENSRNOG00000030157	Dhx16	100	95.985	ENSCATG00000021666	DHX16	100	95.985	Cercocebus_atys
ENSRNOG00000030157	Dhx16	93	94.382	ENSCLAG00000002398	DHX16	100	94.382	Chinchilla_lanigera
ENSRNOG00000030157	Dhx16	100	95.985	ENSCSAG00000008258	DHX16	100	95.985	Chlorocebus_sabaeus
ENSRNOG00000030157	Dhx16	64	88.525	ENSCHOG00000001224	DHX16	80	88.525	Choloepus_hoffmanni
ENSRNOG00000030157	Dhx16	99	75.905	ENSCPBG00000018837	DHX16	99	76.095	Chrysemys_picta_bellii
ENSRNOG00000030157	Dhx16	52	78.022	ENSCING00000006565	-	100	78.022	Ciona_intestinalis
ENSRNOG00000030157	Dhx16	99	61.275	ENSCSAVG00000003870	-	96	77.576	Ciona_savignyi
ENSRNOG00000030157	Dhx16	100	95.889	ENSCANG00000043736	DHX16	100	95.889	Colobus_angolensis_palliatus
ENSRNOG00000030157	Dhx16	100	98.086	ENSCGRG00001008329	Dhx16	100	98.086	Cricetulus_griseus_chok1gshd
ENSRNOG00000030157	Dhx16	98	96.702	ENSCGRG00000014687	Dhx16	100	96.702	Cricetulus_griseus_crigri
ENSRNOG00000030157	Dhx16	99	70.711	ENSCSEG00000012134	dhx16	99	71.008	Cynoglossus_semilaevis
ENSRNOG00000030157	Dhx16	99	60.382	ENSCVAG00000007009	dhx16	99	58.779	Cyprinodon_variegatus
ENSRNOG00000030157	Dhx16	99	72.170	ENSDARG00000013150	dhx16	99	72.080	Danio_rerio
ENSRNOG00000030157	Dhx16	92	86.658	ENSDNOG00000030864	DHX16	100	87.063	Dasypus_novemcinctus
ENSRNOG00000030157	Dhx16	100	93.684	ENSDORG00000003203	Dhx16	100	94.551	Dipodomys_ordii
ENSRNOG00000030157	Dhx16	86	66.000	FBgn0086444	l(2)37Cb	99	66.000	Drosophila_melanogaster
ENSRNOG00000030157	Dhx16	97	93.590	ENSETEG00000003121	DHX16	99	93.590	Echinops_telfairi
ENSRNOG00000030157	Dhx16	99	68.974	ENSEBUG00000001802	dhx16	99	69.990	Eptatretus_burgeri
ENSRNOG00000030157	Dhx16	92	92.923	ENSEASG00005019124	DHX16	99	97.165	Equus_asinus_asinus
ENSRNOG00000030157	Dhx16	100	95.893	ENSECAG00000008537	DHX16	100	95.893	Equus_caballus
ENSRNOG00000030157	Dhx16	99	72.159	ENSELUG00000015727	dhx16	99	72.365	Esox_lucius
ENSRNOG00000030157	Dhx16	100	94.933	ENSFCAG00000007693	DHX16	100	95.411	Felis_catus
ENSRNOG00000030157	Dhx16	93	95.087	ENSFDAG00000017458	DHX16	100	95.087	Fukomys_damarensis
ENSRNOG00000030157	Dhx16	99	72.133	ENSFHEG00000021509	dhx16	99	72.091	Fundulus_heteroclitus
ENSRNOG00000030157	Dhx16	99	69.450	ENSGMOG00000009282	dhx16	99	69.333	Gadus_morhua
ENSRNOG00000030157	Dhx16	99	71.985	ENSGAFG00000014389	dhx16	99	71.985	Gambusia_affinis
ENSRNOG00000030157	Dhx16	99	71.510	ENSGACG00000001768	dhx16	99	76.366	Gasterosteus_aculeatus
ENSRNOG00000030157	Dhx16	91	77.443	ENSGAGG00000003115	DHX16	99	77.419	Gopherus_agassizii
ENSRNOG00000030157	Dhx16	100	95.793	ENSGGOG00000022943	DHX16	100	95.793	Gorilla_gorilla
ENSRNOG00000030157	Dhx16	99	69.668	ENSHBUG00000009952	dhx16	99	68.277	Haplochromis_burtoni
ENSRNOG00000030157	Dhx16	100	94.641	ENSHGLG00000019290	DHX16	100	94.641	Heterocephalus_glaber_female
ENSRNOG00000030157	Dhx16	100	94.545	ENSHGLG00100017127	DHX16	100	94.545	Heterocephalus_glaber_male
ENSRNOG00000030157	Dhx16	99	71.334	ENSHCOG00000006805	dhx16	99	70.500	Hippocampus_comes
ENSRNOG00000030157	Dhx16	99	71.943	ENSIPUG00000001025	DHX16	99	71.822	Ictalurus_punctatus
ENSRNOG00000030157	Dhx16	100	96.176	ENSSTOG00000011881	DHX16	100	96.176	Ictidomys_tridecemlineatus
ENSRNOG00000030157	Dhx16	93	96.087	ENSJJAG00000000186	Dhx16	99	96.087	Jaculus_jaculus
ENSRNOG00000030157	Dhx16	99	72.296	ENSKMAG00000009246	dhx16	99	72.053	Kryptolebias_marmoratus
ENSRNOG00000030157	Dhx16	99	70.132	ENSLBEG00000017249	dhx16	99	70.427	Labrus_bergylta
ENSRNOG00000030157	Dhx16	58	74.468	ENSLACG00000002450	DHX16	99	74.632	Latimeria_chalumnae
ENSRNOG00000030157	Dhx16	100	95.889	ENSLAFG00000026904	DHX16	100	95.889	Loxodonta_africana
ENSRNOG00000030157	Dhx16	100	95.985	ENSMFAG00000003575	DHX16	100	95.985	Macaca_fascicularis
ENSRNOG00000030157	Dhx16	100	95.985	ENSMMUG00000019960	DHX16	100	95.985	Macaca_mulatta
ENSRNOG00000030157	Dhx16	100	95.985	ENSMNEG00000014580	DHX16	100	95.985	Macaca_nemestrina
ENSRNOG00000030157	Dhx16	100	95.985	ENSMLEG00000043805	DHX16	100	95.985	Mandrillus_leucophaeus
ENSRNOG00000030157	Dhx16	99	72.624	ENSMAMG00000009784	dhx16	99	72.641	Mastacembelus_armatus
ENSRNOG00000030157	Dhx16	99	72.460	ENSMZEG00005027755	dhx16	99	72.148	Maylandia_zebra
ENSRNOG00000030157	Dhx16	100	97.990	ENSMAUG00000001696	Dhx16	100	97.990	Mesocricetus_auratus
ENSRNOG00000030157	Dhx16	100	95.793	ENSMICG00000014819	DHX16	100	95.793	Microcebus_murinus
ENSRNOG00000030157	Dhx16	100	97.321	ENSMOCG00000010715	Dhx16	100	97.321	Microtus_ochrogaster
ENSRNOG00000030157	Dhx16	99	71.836	ENSMMOG00000016621	dhx16	99	72.137	Mola_mola
ENSRNOG00000030157	Dhx16	85	94.144	ENSMODG00000015890	DHX16	99	93.617	Monodelphis_domestica
ENSRNOG00000030157	Dhx16	99	71.103	ENSMALG00000003384	dhx16	99	70.829	Monopterus_albus
ENSRNOG00000030157	Dhx16	93	98.668	MGP_CAROLIEiJ_G0021538	Dhx16	100	98.668	Mus_caroli
ENSRNOG00000030157	Dhx16	100	98.373	ENSMUSG00000024422	Dhx16	100	98.373	Mus_musculus
ENSRNOG00000030157	Dhx16	100	98.565	MGP_PahariEiJ_G0020532	Dhx16	100	98.565	Mus_pahari
ENSRNOG00000030157	Dhx16	100	94.737	MGP_SPRETEiJ_G0022445	Dhx16	100	94.737	Mus_spretus
ENSRNOG00000030157	Dhx16	100	95.120	ENSMPUG00000011719	DHX16	94	95.311	Mustela_putorius_furo
ENSRNOG00000030157	Dhx16	100	92.344	ENSMLUG00000008932	DHX16	100	92.919	Myotis_lucifugus
ENSRNOG00000030157	Dhx16	100	96.176	ENSNGAG00000001106	Dhx16	100	96.080	Nannospalax_galili
ENSRNOG00000030157	Dhx16	99	72.270	ENSNBRG00000005624	dhx16	99	72.424	Neolamprologus_brichardi
ENSRNOG00000030157	Dhx16	100	93.720	ENSNLEG00000005270	DHX16	100	94.487	Nomascus_leucogenys
ENSRNOG00000030157	Dhx16	85	97.043	ENSMEUG00000012522	DHX16	85	97.043	Notamacropus_eugenii
ENSRNOG00000030157	Dhx16	100	94.651	ENSOPRG00000001864	DHX16	100	94.938	Ochotona_princeps
ENSRNOG00000030157	Dhx16	50	98.861	ENSODEG00000017885	DHX16	99	98.861	Octodon_degus
ENSRNOG00000030157	Dhx16	99	72.590	ENSONIG00000002234	dhx16	99	72.102	Oreochromis_niloticus
ENSRNOG00000030157	Dhx16	100	94.174	ENSOCUG00000002163	DHX16	100	94.174	Oryctolagus_cuniculus
ENSRNOG00000030157	Dhx16	99	72.883	ENSORLG00000015982	dhx16	99	86.267	Oryzias_latipes
ENSRNOG00000030157	Dhx16	99	72.788	ENSORLG00020014134	dhx16	99	72.502	Oryzias_latipes_hni
ENSRNOG00000030157	Dhx16	99	72.978	ENSORLG00015020617	dhx16	99	85.444	Oryzias_latipes_hsok
ENSRNOG00000030157	Dhx16	99	72.486	ENSOMEG00000019560	dhx16	99	72.322	Oryzias_melastigma
ENSRNOG00000030157	Dhx16	100	95.411	ENSOGAG00000008300	DHX16	100	95.220	Otolemur_garnettii
ENSRNOG00000030157	Dhx16	100	93.983	ENSOARG00000012046	DHX16	100	93.983	Ovis_aries
ENSRNOG00000030157	Dhx16	100	95.889	ENSPPAG00000025169	DHX16	100	95.889	Pan_paniscus
ENSRNOG00000030157	Dhx16	100	94.933	ENSPPRG00000000329	DHX16	100	95.411	Panthera_pardus
ENSRNOG00000030157	Dhx16	100	94.460	ENSPTIG00000010694	DHX16	100	94.938	Panthera_tigris_altaica
ENSRNOG00000030157	Dhx16	100	95.793	ENSPTRG00000017935	DHX16	100	95.793	Pan_troglodytes
ENSRNOG00000030157	Dhx16	52	96.344	ENSPANG00000018482	DHX16	98	96.344	Papio_anubis
ENSRNOG00000030157	Dhx16	99	71.375	ENSPKIG00000012693	dhx16	99	71.807	Paramormyrops_kingsleyae
ENSRNOG00000030157	Dhx16	99	69.135	ENSPSIG00000012007	DHX16	99	69.135	Pelodiscus_sinensis
ENSRNOG00000030157	Dhx16	99	69.602	ENSPMGG00000000154	dhx16	99	69.508	Periophthalmus_magnuspinnatus
ENSRNOG00000030157	Dhx16	100	98.278	ENSPEMG00000017508	Dhx16	100	98.278	Peromyscus_maniculatus_bairdii
ENSRNOG00000030157	Dhx16	100	90.640	ENSPCIG00000014991	DHX16	100	89.685	Phascolarctos_cinereus
ENSRNOG00000030157	Dhx16	99	72.443	ENSPFOG00000002575	dhx16	99	72.814	Poecilia_formosa
ENSRNOG00000030157	Dhx16	99	71.996	ENSPLAG00000014305	dhx16	99	72.365	Poecilia_latipinna
ENSRNOG00000030157	Dhx16	99	72.633	ENSPMEG00000006632	dhx16	100	71.822	Poecilia_mexicana
ENSRNOG00000030157	Dhx16	100	71.659	ENSPREG00000003371	dhx16	100	72.175	Poecilia_reticulata
ENSRNOG00000030157	Dhx16	100	94.359	ENSPPYG00000016415	DHX16	100	95.124	Pongo_abelii
ENSRNOG00000030157	Dhx16	100	90.249	ENSPCAG00000017034	DHX16	100	90.153	Procavia_capensis
ENSRNOG00000030157	Dhx16	100	95.985	ENSPCOG00000013298	DHX16	100	95.985	Propithecus_coquereli
ENSRNOG00000030157	Dhx16	92	97.279	ENSPVAG00000003984	DHX16	92	97.279	Pteropus_vampyrus
ENSRNOG00000030157	Dhx16	95	71.429	ENSPNYG00000018755	dhx16	99	71.972	Pundamilia_nyererei
ENSRNOG00000030157	Dhx16	99	71.917	ENSPNAG00000018065	dhx16	99	72.106	Pygocentrus_nattereri
ENSRNOG00000030157	Dhx16	100	95.793	ENSRBIG00000039655	DHX16	100	95.793	Rhinopithecus_bieti
ENSRNOG00000030157	Dhx16	100	94.641	ENSRROG00000031909	DHX16	100	95.411	Rhinopithecus_roxellana
ENSRNOG00000030157	Dhx16	61	54.440	YNR011C	PRP2	83	47.268	Saccharomyces_cerevisiae
ENSRNOG00000030157	Dhx16	100	95.507	ENSSBOG00000020142	DHX16	100	95.507	Saimiri_boliviensis_boliviensis
ENSRNOG00000030157	Dhx16	100	89.685	ENSSHAG00000007234	DHX16	100	89.207	Sarcophilus_harrisii
ENSRNOG00000030157	Dhx16	100	72.564	ENSSFOG00015019853	dhx16	98	72.796	Scleropages_formosus
ENSRNOG00000030157	Dhx16	99	70.883	ENSSMAG00000019598	dhx16	99	69.192	Scophthalmus_maximus
ENSRNOG00000030157	Dhx16	99	72.296	ENSSDUG00000006948	dhx16	99	72.259	Seriola_dumerili
ENSRNOG00000030157	Dhx16	99	72.338	ENSSLDG00000012742	dhx16	99	72.069	Seriola_lalandi_dorsalis
ENSRNOG00000030157	Dhx16	99	76.733	ENSSPUG00000015145	DHX16	99	76.331	Sphenodon_punctatus
ENSRNOG00000030157	Dhx16	91	81.304	ENSSPAG00000012416	dhx16	99	81.304	Stegastes_partitus
ENSRNOG00000030157	Dhx16	100	95.224	ENSSSCG00000001376	DHX16	100	95.224	Sus_scrofa
ENSRNOG00000030157	Dhx16	99	72.264	ENSTRUG00000004927	dhx16	99	71.890	Takifugu_rubripes
ENSRNOG00000030157	Dhx16	99	70.965	ENSTNIG00000011641	dhx16	99	69.479	Tetraodon_nigroviridis
ENSRNOG00000030157	Dhx16	87	95.471	ENSTTRG00000008323	DHX16	87	95.471	Tursiops_truncatus
ENSRNOG00000030157	Dhx16	100	94.928	ENSUAMG00000026299	DHX16	99	98.669	Ursus_americanus
ENSRNOG00000030157	Dhx16	100	95.411	ENSUMAG00000019661	DHX16	94	95.602	Ursus_maritimus
ENSRNOG00000030157	Dhx16	100	95.024	ENSVVUG00000009831	DHX16	100	95.215	Vulpes_vulpes
ENSRNOG00000030157	Dhx16	99	65.167	ENSXETG00000024069	dhx16	100	66.300	Xenopus_tropicalis
ENSRNOG00000030157	Dhx16	99	69.550	ENSXCOG00000003774	dhx16	99	72.079	Xiphophorus_couchianus
ENSRNOG00000030157	Dhx16	99	72.206	ENSXMAG00000013293	dhx16	99	72.206	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	IEA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005681	spliceosomal complex	21873635.	IBA	Component
GO:0005681	spliceosomal complex	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0016887	ATPase activity	-	ISO	Function
GO:0034459	ATP-dependent 3'-5' RNA helicase activity	21873635.	IBA	Function