EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000030308 (Gene tree)
Gene ID: 366954
Gene Symbol: Zfp251
Alias: LOC366954|Znf251
Full Name: zinc finger protein 251
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 30047 bases
Position: chr7:117909961-117940007
Accession: 1311138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000028184	zf-C2H2	PF00096.26	9.7e-64	1	11
ENSRNOP00000028184	zf-C2H2	PF00096.26	9.7e-64	2	11
ENSRNOP00000028184	zf-C2H2	PF00096.26	9.7e-64	3	11
ENSRNOP00000028184	zf-C2H2	PF00096.26	9.7e-64	4	11
ENSRNOP00000028184	zf-C2H2	PF00096.26	9.7e-64	5	11
ENSRNOP00000028184	zf-C2H2	PF00096.26	9.7e-64	6	11
ENSRNOP00000028184	zf-C2H2	PF00096.26	9.7e-64	7	11
ENSRNOP00000028184	zf-C2H2	PF00096.26	9.7e-64	8	11
ENSRNOP00000028184	zf-C2H2	PF00096.26	9.7e-64	9	11
ENSRNOP00000028184	zf-C2H2	PF00096.26	9.7e-64	10	11
ENSRNOP00000028184	zf-C2H2	PF00096.26	9.7e-64	11	11
ENSRNOP00000028184	zf-met	PF12874.7	0.0003	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000028184	-	3979	-	ENSRNOP00000028184	633 (aa)	-	H7C5Y4

Gene Model

Click here to download ENSRNOG00000030308's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000030308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000030308	Zfp251	67	40.805	ENSRNOG00000013460	Zfp319	91	41.590
ENSRNOG00000030308	Zfp251	58	40.602	ENSRNOG00000047699	Snai2	50	40.602
ENSRNOG00000030308	Zfp251	97	47.414	ENSRNOG00000022431	Zfp867	99	47.414
ENSRNOG00000030308	Zfp251	67	47.294	ENSRNOG00000024056	Zfp17	75	47.294
ENSRNOG00000030308	Zfp251	70	55.435	ENSRNOG00000029490	Znf768	51	54.770
ENSRNOG00000030308	Zfp251	71	60.544	ENSRNOG00000032625	AC118165.1	98	60.544
ENSRNOG00000030308	Zfp251	94	47.287	ENSRNOG00000049259	LOC102549842	99	48.916
ENSRNOG00000030308	Zfp251	68	57.333	ENSRNOG00000048394	Zfp560	75	57.333
ENSRNOG00000030308	Zfp251	95	51.953	ENSRNOG00000016417	Zfp136	99	52.805
ENSRNOG00000030308	Zfp251	74	31.646	ENSRNOG00000016874	Zfp521	89	31.646
ENSRNOG00000030308	Zfp251	76	55.000	ENSRNOG00000019059	Zfp1	91	55.000
ENSRNOG00000030308	Zfp251	69	55.120	ENSRNOG00000042777	Zfp28	62	55.120
ENSRNOG00000030308	Zfp251	94	40.351	ENSRNOG00000007576	Zfp597	97	40.351
ENSRNOG00000030308	Zfp251	97	52.427	ENSRNOG00000043341	Zfp51	98	52.427
ENSRNOG00000030308	Zfp251	67	57.778	ENSRNOG00000003455	Zfp13	60	54.626
ENSRNOG00000030308	Zfp251	57	41.791	ENSRNOG00000013586	Snai3	69	41.791
ENSRNOG00000030308	Zfp251	96	51.220	ENSRNOG00000025937	Zfp26	99	51.220
ENSRNOG00000030308	Zfp251	67	61.066	ENSRNOG00000015188	AABR07053681.1	87	61.066
ENSRNOG00000030308	Zfp251	95	49.650	ENSRNOG00000052406	LOC102552527	99	49.650
ENSRNOG00000030308	Zfp251	68	40.594	ENSRNOG00000055761	Zfp574	72	38.418
ENSRNOG00000030308	Zfp251	70	45.614	ENSRNOG00000002713	Zfp672	88	45.614
ENSRNOG00000030308	Zfp251	96	57.364	ENSRNOG00000019416	Zfp61	96	57.426
ENSRNOG00000030308	Zfp251	69	41.509	ENSRNOG00000008239	Repin1	82	41.196
ENSRNOG00000030308	Zfp251	67	38.645	ENSRNOG00000028628	LOC100911196	79	37.984
ENSRNOG00000030308	Zfp251	80	53.651	ENSRNOG00000014712	Zfp39	69	53.651
ENSRNOG00000030308	Zfp251	72	47.368	ENSRNOG00000061533	AABR07001926.3	86	47.368
ENSRNOG00000030308	Zfp251	66	50.000	ENSRNOG00000016279	Zfp865	72	50.000
ENSRNOG00000030308	Zfp251	94	43.275	ENSRNOG00000006684	Zfp317	86	44.125
ENSRNOG00000030308	Zfp251	69	39.628	ENSRNOG00000023679	Prdm5	73	39.628
ENSRNOG00000030308	Zfp251	68	53.313	ENSRNOG00000014331	Zfp810	85	53.313
ENSRNOG00000030308	Zfp251	97	57.057	ENSRNOG00000030517	Zfp879	96	50.289
ENSRNOG00000030308	Zfp251	67	32.381	ENSRNOG00000014658	Zfp423	98	32.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000030308	Zfp251	100	86.909	ENSMOCG00000021383	Zfp251	100	86.909	Microtus_ochrogaster
ENSRNOG00000030308	Zfp251	100	92.271	MGP_CAROLIEiJ_G0019949	Zfp251	100	92.271	Mus_caroli
ENSRNOG00000030308	Zfp251	100	91.798	ENSMUSG00000022526	Zfp251	100	91.798	Mus_musculus
ENSRNOG00000030308	Zfp251	100	93.375	MGP_PahariEiJ_G0019959	Zfp251	100	93.375	Mus_pahari
ENSRNOG00000030308	Zfp251	100	92.114	MGP_SPRETEiJ_G0020852	Zfp251	100	92.114	Mus_spretus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function