EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000030517 (Gene tree)
Gene ID: 497896
Gene Symbol: Zfp879
Alias: LOC497896|RGD1563273|Zfp980
Full Name: zinc finger protein 879
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 9996 bases
Position: chr10:36326633-36336628
Accession: 1563273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	1	12
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	2	12
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	3	12
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	4	12
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	5	12
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	6	12
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	7	12
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	8	12
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	9	12
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	10	12
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	11	12
ENSRNOP00000036773	zf-C2H2	PF00096.26	1e-71	12	12
ENSRNOP00000036773	zf-met	PF12874.7	7.1e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000030035	-	2355	-	ENSRNOP00000036773	555 (aa)	-	D3ZCJ8

Gene Model

Click here to download ENSRNOG00000030517's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000030517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000030517	Zfp879	66	34.831	ENSRNOG00000007576	Zfp597	96	36.032
ENSRNOG00000030517	Zfp879	97	56.233	ENSRNOG00000052406	LOC102552527	98	56.233
ENSRNOG00000030517	Zfp879	96	50.289	ENSRNOG00000030308	Zfp251	97	57.057
ENSRNOG00000030517	Zfp879	67	40.000	ENSRNOG00000023679	Prdm5	71	40.000
ENSRNOG00000030517	Zfp879	66	39.108	ENSRNOG00000055761	Zfp574	93	39.370
ENSRNOG00000030517	Zfp879	72	60.704	ENSRNOG00000032625	AC118165.1	100	60.704
ENSRNOG00000030517	Zfp879	69	39.296	ENSRNOG00000008239	Repin1	84	40.166
ENSRNOG00000030517	Zfp879	68	53.543	ENSRNOG00000014331	Zfp810	85	53.543
ENSRNOG00000030517	Zfp879	96	60.055	ENSRNOG00000042777	Zfp28	83	60.055
ENSRNOG00000030517	Zfp879	77	59.111	ENSRNOG00000003455	Zfp13	77	59.111
ENSRNOG00000030517	Zfp879	65	51.852	ENSRNOG00000016279	Zfp865	65	51.852
ENSRNOG00000030517	Zfp879	68	44.681	ENSRNOG00000002713	Zfp672	91	43.878
ENSRNOG00000030517	Zfp879	72	43.169	ENSRNOG00000013460	Zfp319	91	43.169
ENSRNOG00000030517	Zfp879	77	70.000	ENSRNOG00000043341	Zfp51	98	55.449
ENSRNOG00000030517	Zfp879	99	46.154	ENSRNOG00000006684	Zfp317	92	46.154
ENSRNOG00000030517	Zfp879	98	46.726	ENSRNOG00000016417	Zfp136	99	46.726
ENSRNOG00000030517	Zfp879	68	51.546	ENSRNOG00000024056	Zfp17	75	52.762
ENSRNOG00000030517	Zfp879	75	57.143	ENSRNOG00000014712	Zfp39	66	57.143
ENSRNOG00000030517	Zfp879	99	57.182	ENSRNOG00000025937	Zfp26	90	57.182
ENSRNOG00000030517	Zfp879	68	59.677	ENSRNOG00000048394	Zfp560	84	59.677
ENSRNOG00000030517	Zfp879	67	61.728	ENSRNOG00000015188	AABR07053681.1	80	61.728
ENSRNOG00000030517	Zfp879	98	53.268	ENSRNOG00000022431	Zfp867	98	53.268
ENSRNOG00000030517	Zfp879	71	40.132	ENSRNOG00000013586	Snai3	68	40.132
ENSRNOG00000030517	Zfp879	98	54.420	ENSRNOG00000049259	LOC102549842	99	54.420
ENSRNOG00000030517	Zfp879	73	43.396	ENSRNOG00000009594	Snai1	51	43.396
ENSRNOG00000030517	Zfp879	68	57.246	ENSRNOG00000029490	Znf768	53	56.643
ENSRNOG00000030517	Zfp879	98	56.270	ENSRNOG00000019416	Zfp61	98	55.319
ENSRNOG00000030517	Zfp879	74	52.941	ENSRNOG00000061533	AABR07001926.3	90	52.941
ENSRNOG00000030517	Zfp879	72	50.233	ENSRNOG00000027923	Mynn	51	49.223
ENSRNOG00000030517	Zfp879	97	56.846	ENSRNOG00000019059	Zfp1	99	56.846
ENSRNOG00000030517	Zfp879	98	30.476	ENSRNOG00000022730	Zfp57	83	30.476
ENSRNOG00000030517	Zfp879	67	40.268	ENSRNOG00000047699	Snai2	55	40.268
ENSRNOG00000030517	Zfp879	67	31.944	ENSRNOG00000016874	Zfp521	93	32.018
ENSRNOG00000030517	Zfp879	68	39.674	ENSRNOG00000028628	LOC100911196	79	39.674
ENSRNOG00000030517	Zfp879	69	41.975	ENSRNOG00000014658	Zfp423	99	41.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000030517	Zfp879	100	87.034	ENSMAUG00000000179	Zfp879	100	87.034	Mesocricetus_auratus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function