EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000030563 (Gene tree)
Gene ID: -
Gene Symbol: AABR07013798.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 342 bases
Position: chr2:257295193-257295534
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000044837	Ribosomal_L30_N	PF08079.12	2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000052249	AABR07013798.1-201	342	-	ENSRNOP00000044837	114 (aa)	-	F1LXU1

Gene Model

Click here to download ENSRNOG00000030563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000030563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000030563	AABR07013798.1	64	68.493	ENSRNOG00000031912	LOC367195	50	68.493
ENSRNOG00000030563	AABR07013798.1	79	71.698	ENSRNOG00000007402	AC121415.1	52	71.698

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000030563	AABR07013798.1	97	81.579	ENSG00000147604	RPL7	51	77.778	Homo_sapiens
ENSRNOG00000030563	AABR07013798.1	100	76.923	ENSACIG00000000602	rpl7	96	59.091	Amphilophus_citrinellus
ENSRNOG00000030563	AABR07013798.1	97	76.923	ENSACLG00000024449	rpl7	96	60.909	Astatotilapia_calliptera
ENSRNOG00000030563	AABR07013798.1	97	81.579	ENSCJAG00000016367	-	50	81.579	Callithrix_jacchus
ENSRNOG00000030563	AABR07013798.1	98	76.923	ENSCAFG00000009806	-	50	81.081	Canis_familiaris
ENSRNOG00000030563	AABR07013798.1	89	84.848	ENSCCAG00000027303	-	57	75.949	Cebus_capucinus
ENSRNOG00000030563	AABR07013798.1	96	79.730	ENSCATG00000038664	-	51	79.730	Cercocebus_atys
ENSRNOG00000030563	AABR07013798.1	96	77.333	ENSCGRG00001000473	-	54	77.333	Cricetulus_griseus_chok1gshd
ENSRNOG00000030563	AABR07013798.1	96	69.512	ENSCGRG00001022909	-	50	69.512	Cricetulus_griseus_chok1gshd
ENSRNOG00000030563	AABR07013798.1	96	69.512	ENSCGRG00000015802	-	50	69.512	Cricetulus_griseus_crigri
ENSRNOG00000030563	AABR07013798.1	96	81.081	ENSFDAG00000012317	-	54	81.081	Fukomys_damarensis
ENSRNOG00000030563	AABR07013798.1	99	81.579	ENSGGOG00000010063	-	52	81.579	Gorilla_gorilla
ENSRNOG00000030563	AABR07013798.1	72	71.951	ENSLAFG00000031628	-	67	71.951	Loxodonta_africana
ENSRNOG00000030563	AABR07013798.1	97	82.667	ENSMNEG00000044457	-	51	82.667	Macaca_nemestrina
ENSRNOG00000030563	AABR07013798.1	96	40.244	ENSMAUG00000021183	Rpl7	95	40.244	Mesocricetus_auratus
ENSRNOG00000030563	AABR07013798.1	97	81.579	ENSODEG00000010358	-	52	81.579	Octodon_degus
ENSRNOG00000030563	AABR07013798.1	63	63.889	ENSOCUG00000010910	-	54	63.889	Oryctolagus_cuniculus
ENSRNOG00000030563	AABR07013798.1	96	72.000	ENSOGAG00000033158	-	52	72.000	Otolemur_garnettii
ENSRNOG00000030563	AABR07013798.1	96	69.091	ENSPPRG00000008248	-	97	69.091	Panthera_pardus
ENSRNOG00000030563	AABR07013798.1	66	66.667	ENSPPRG00000020877	-	50	66.667	Panthera_pardus
ENSRNOG00000030563	AABR07013798.1	90	79.221	ENSPTRG00000051780	-	52	79.221	Pan_troglodytes
ENSRNOG00000030563	AABR07013798.1	69	78.481	ENSPCOG00000015044	-	62	78.481	Propithecus_coquereli
ENSRNOG00000030563	AABR07013798.1	96	79.730	ENSRBIG00000031210	-	51	77.632	Rhinopithecus_bieti
ENSRNOG00000030563	AABR07013798.1	97	73.418	ENSRROG00000028679	-	51	73.418	Rhinopithecus_roxellana
ENSRNOG00000030563	AABR07013798.1	93	37.647	ENSSBOG00000031926	-	96	37.714	Saimiri_boliviensis_boliviensis
ENSRNOG00000030563	AABR07013798.1	89	83.333	ENSSBOG00000034681	-	50	76.316	Saimiri_boliviensis_boliviensis
ENSRNOG00000030563	AABR07013798.1	96	78.947	ENSXCOG00000007203	rpl7	96	60.909	Xiphophorus_couchianus