EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000030830 (Gene tree)
Gene ID: 299613
Gene Symbol: Mex3d
Alias: LOC299613|Rkhd1
Full Name: mex-3 RNA binding family member D
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 6464 bases
Position: chr7:12192088-12198551
Accession: 1310576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000047111	KH_1	PF00013.29	2.6e-25	1	2
ENSRNOP00000047111	KH_1	PF00013.29	2.6e-25	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000040170	-	2360	XM_006241041	ENSRNOP00000047111	662 (aa)	XP_006241103	F1M5V7

Gene Model

Click here to download ENSRNOG00000030830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000030830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000030830	Mex3d	51	67.308	ENSRNOG00000058654	AC119762.3	76	67.308
ENSRNOG00000030830	Mex3d	74	51.318	ENSRNOG00000015777	Mex3c	95	50.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000030830	Mex3d	82	79.137	ENSG00000181588	MEX3D	99	78.728	Homo_sapiens
ENSRNOG00000030830	Mex3d	81	51.625	ENSAPOG00000000124	MEX3D	99	52.151	Acanthochromis_polyacanthus
ENSRNOG00000030830	Mex3d	67	80.095	ENSACIG00000017738	-	77	65.385	Amphilophus_citrinellus
ENSRNOG00000030830	Mex3d	58	58.524	ENSAOCG00000015529	MEX3D	95	54.990	Amphiprion_ocellaris
ENSRNOG00000030830	Mex3d	58	58.524	ENSAPEG00000012520	MEX3D	95	54.990	Amphiprion_percula
ENSRNOG00000030830	Mex3d	68	64.706	ENSATEG00000015620	MEX3D	95	49.911	Anabas_testudineus
ENSRNOG00000030830	Mex3d	77	77.953	ENSANAG00000035413	-	86	76.772	Aotus_nancymaae
ENSRNOG00000030830	Mex3d	81	50.452	ENSACLG00000002826	MEX3D	92	51.532	Astatotilapia_calliptera
ENSRNOG00000030830	Mex3d	65	72.093	ENSAMXG00000042500	MEX3D	95	54.510	Astyanax_mexicanus
ENSRNOG00000030830	Mex3d	81	77.231	ENSBTAG00000040334	MEX3D	81	79.197	Bos_taurus
ENSRNOG00000030830	Mex3d	81	80.519	ENSCJAG00000045432	MEX3D	82	78.995	Callithrix_jacchus
ENSRNOG00000030830	Mex3d	71	79.657	ENSCAFG00000023712	MEX3D	100	77.302	Canis_familiaris
ENSRNOG00000030830	Mex3d	78	79.655	ENSCAFG00020017245	MEX3D	84	76.000	Canis_lupus_dingo
ENSRNOG00000030830	Mex3d	81	77.656	ENSCHIG00000012929	MEX3D	81	79.197	Capra_hircus
ENSRNOG00000030830	Mex3d	81	80.699	ENSCCAG00000028942	MEX3D	99	79.459	Cebus_capucinus
ENSRNOG00000030830	Mex3d	83	81.047	ENSCATG00000029350	MEX3D	86	80.000	Cercocebus_atys
ENSRNOG00000030830	Mex3d	83	81.227	ENSCSAG00000011984	MEX3D	89	79.964	Chlorocebus_sabaeus
ENSRNOG00000030830	Mex3d	81	62.662	ENSCPBG00000018438	MEX3D	81	63.971	Chrysemys_picta_bellii
ENSRNOG00000030830	Mex3d	97	95.194	ENSCGRG00001023775	Mex3d	90	91.629	Cricetulus_griseus_chok1gshd
ENSRNOG00000030830	Mex3d	90	94.983	ENSCGRG00000018060	Mex3d	99	94.147	Cricetulus_griseus_crigri
ENSRNOG00000030830	Mex3d	76	48.549	ENSCSEG00000014157	MEX3D	95	51.657	Cynoglossus_semilaevis
ENSRNOG00000030830	Mex3d	58	57.761	ENSCVAG00000021251	MEX3D	88	49.264	Cyprinodon_variegatus
ENSRNOG00000030830	Mex3d	56	74.016	ENSDNOG00000041317	-	96	75.066	Dasypus_novemcinctus
ENSRNOG00000030830	Mex3d	81	80.146	ENSEASG00005021741	MEX3D	81	79.781	Equus_asinus_asinus
ENSRNOG00000030830	Mex3d	81	80.439	ENSECAG00000030546	MEX3D	59	80.256	Equus_caballus
ENSRNOG00000030830	Mex3d	78	50.190	ENSELUG00000008214	MEX3D	97	53.030	Esox_lucius
ENSRNOG00000030830	Mex3d	78	79.576	ENSFCAG00000043755	MEX3D	97	78.506	Felis_catus
ENSRNOG00000030830	Mex3d	51	92.105	ENSFDAG00000009670	-	99	90.909	Fukomys_damarensis
ENSRNOG00000030830	Mex3d	76	65.810	ENSGALG00000052296	MEX3D	90	64.087	Gallus_gallus
ENSRNOG00000030830	Mex3d	65	67.925	ENSGAFG00000008425	MEX3D	87	69.057	Gambusia_affinis
ENSRNOG00000030830	Mex3d	74	51.193	ENSGACG00000015299	MEX3D	94	52.651	Gasterosteus_aculeatus
ENSRNOG00000030830	Mex3d	81	62.847	ENSGAGG00000001233	MEX3D	80	63.971	Gopherus_agassizii
ENSRNOG00000030830	Mex3d	78	78.420	ENSGGOG00000001083	-	99	77.649	Gorilla_gorilla
ENSRNOG00000030830	Mex3d	81	51.537	ENSHBUG00000021600	MEX3D	92	52.277	Haplochromis_burtoni
ENSRNOG00000030830	Mex3d	81	79.151	ENSHGLG00000015152	MEX3D	82	78.085	Heterocephalus_glaber_female
ENSRNOG00000030830	Mex3d	78	52.583	ENSHCOG00000001289	MEX3D	80	65.385	Hippocampus_comes
ENSRNOG00000030830	Mex3d	58	58.656	ENSIPUG00000019444	MEX3D	89	54.990	Ictalurus_punctatus
ENSRNOG00000030830	Mex3d	79	85.038	ENSSTOG00000025299	MEX3D	99	82.576	Ictidomys_tridecemlineatus
ENSRNOG00000030830	Mex3d	85	84.071	ENSJJAG00000024350	Mex3d	97	81.593	Jaculus_jaculus
ENSRNOG00000030830	Mex3d	58	57.949	ENSKMAG00000006645	MEX3D	97	52.311	Kryptolebias_marmoratus
ENSRNOG00000030830	Mex3d	81	48.606	ENSLBEG00000000974	MEX3D	84	51.064	Labrus_bergylta
ENSRNOG00000030830	Mex3d	78	58.925	ENSLACG00000016407	MEX3D	80	57.934	Latimeria_chalumnae
ENSRNOG00000030830	Mex3d	80	78.771	ENSMFAG00000043798	MEX3D	99	78.585	Macaca_fascicularis
ENSRNOG00000030830	Mex3d	81	81.970	ENSMMUG00000043577	MEX3D	96	77.662	Macaca_mulatta
ENSRNOG00000030830	Mex3d	83	69.801	ENSMNEG00000043766	MEX3D	86	70.524	Macaca_nemestrina
ENSRNOG00000030830	Mex3d	81	48.793	ENSMAMG00000009575	MEX3D	79	65.385	Mastacembelus_armatus
ENSRNOG00000030830	Mex3d	81	48.986	ENSMZEG00005025626	MEX3D	85	51.031	Maylandia_zebra
ENSRNOG00000030830	Mex3d	71	64.392	ENSMGAG00000002325	MEX3D	99	64.468	Meleagris_gallopavo
ENSRNOG00000030830	Mex3d	97	93.186	ENSMAUG00000014977	Mex3d	98	90.440	Mesocricetus_auratus
ENSRNOG00000030830	Mex3d	78	82.819	ENSMICG00000036648	MEX3D	83	80.072	Microcebus_murinus
ENSRNOG00000030830	Mex3d	92	91.720	ENSMOCG00000010308	Mex3d	99	91.083	Microtus_ochrogaster
ENSRNOG00000030830	Mex3d	83	64.528	ENSMODG00000004116	MEX3D	100	65.841	Monodelphis_domestica
ENSRNOG00000030830	Mex3d	75	51.946	ENSMALG00000020525	MEX3D	95	53.307	Monopterus_albus
ENSRNOG00000030830	Mex3d	98	97.059	MGP_CAROLIEiJ_G0015582	Mex3d	99	97.213	Mus_caroli
ENSRNOG00000030830	Mex3d	98	96.749	ENSMUSG00000048696	Mex3d	90	96.749	Mus_musculus
ENSRNOG00000030830	Mex3d	98	96.904	MGP_SPRETEiJ_G0016400	Mex3d	99	97.049	Mus_spretus
ENSRNOG00000030830	Mex3d	70	74.353	ENSMLUG00000017018	MEX3D	95	74.034	Myotis_lucifugus
ENSRNOG00000030830	Mex3d	96	81.960	ENSNGAG00000021771	Mex3d	99	82.623	Nannospalax_galili
ENSRNOG00000030830	Mex3d	69	67.442	ENSNBRG00000020089	MEX3D	92	52.095	Neolamprologus_brichardi
ENSRNOG00000030830	Mex3d	59	84.000	ENSNLEG00000001719	-	99	83.243	Nomascus_leucogenys
ENSRNOG00000030830	Mex3d	72	65.909	ENSMEUG00000016404	-	100	66.803	Notamacropus_eugenii
ENSRNOG00000030830	Mex3d	62	78.412	ENSOPRG00000008708	-	94	78.772	Ochotona_princeps
ENSRNOG00000030830	Mex3d	78	79.087	ENSODEG00000012631	MEX3D	86	76.268	Octodon_degus
ENSRNOG00000030830	Mex3d	52	72.174	ENSOANG00000011764	-	95	72.055	Ornithorhynchus_anatinus
ENSRNOG00000030830	Mex3d	78	51.481	ENSORLG00000015223	MEX3D	85	53.345	Oryzias_latipes
ENSRNOG00000030830	Mex3d	78	52.264	ENSORLG00020017489	MEX3D	84	52.613	Oryzias_latipes_hni
ENSRNOG00000030830	Mex3d	81	51.188	ENSORLG00015017429	MEX3D	89	53.801	Oryzias_latipes_hsok
ENSRNOG00000030830	Mex3d	67	65.455	ENSOMEG00000020682	MEX3D	98	51.838	Oryzias_melastigma
ENSRNOG00000030830	Mex3d	78	82.625	ENSOGAG00000032843	MEX3D	99	80.586	Otolemur_garnettii
ENSRNOG00000030830	Mex3d	83	80.072	ENSPTRG00000010208	MEX3D	91	79.713	Pan_troglodytes
ENSRNOG00000030830	Mex3d	81	77.551	ENSPANG00000025407	MEX3D	82	75.696	Papio_anubis
ENSRNOG00000030830	Mex3d	74	53.082	ENSPKIG00000011176	-	90	52.778	Paramormyrops_kingsleyae
ENSRNOG00000030830	Mex3d	76	50.577	ENSPKIG00000018608	MEX3D	90	53.269	Paramormyrops_kingsleyae
ENSRNOG00000030830	Mex3d	81	49.192	ENSPMGG00000017213	-	86	50.735	Periophthalmus_magnuspinnatus
ENSRNOG00000030830	Mex3d	80	65.930	ENSPCIG00000000826	MEX3D	76	65.893	Phascolarctos_cinereus
ENSRNOG00000030830	Mex3d	78	51.184	ENSPFOG00000013402	MEX3D	96	53.069	Poecilia_formosa
ENSRNOG00000030830	Mex3d	78	52.000	ENSPLAG00000018945	MEX3D	96	52.652	Poecilia_latipinna
ENSRNOG00000030830	Mex3d	78	50.854	ENSPMEG00000009307	MEX3D	93	52.372	Poecilia_mexicana
ENSRNOG00000030830	Mex3d	68	64.706	ENSPREG00000017736	MEX3D	93	52.552	Poecilia_reticulata
ENSRNOG00000030830	Mex3d	77	79.843	ENSPPYG00000009324	-	99	79.061	Pongo_abelii
ENSRNOG00000030830	Mex3d	54	79.943	ENSPCAG00000010972	-	100	81.089	Procavia_capensis
ENSRNOG00000030830	Mex3d	83	81.038	ENSPCOG00000021111	MEX3D	93	80.680	Propithecus_coquereli
ENSRNOG00000030830	Mex3d	81	51.356	ENSPNYG00000006622	-	92	52.920	Pundamilia_nyererei
ENSRNOG00000030830	Mex3d	79	50.000	ENSPNAG00000027243	MEX3D	94	53.119	Pygocentrus_nattereri
ENSRNOG00000030830	Mex3d	74	54.418	ENSSFOG00015003876	mex3d	85	52.773	Scleropages_formosus
ENSRNOG00000030830	Mex3d	58	59.383	ENSSMAG00000003087	MEX3D	83	52.834	Scophthalmus_maximus
ENSRNOG00000030830	Mex3d	74	49.899	ENSSDUG00000015559	MEX3D	77	65.385	Seriola_dumerili
ENSRNOG00000030830	Mex3d	81	48.370	ENSSLDG00000010251	MEX3D	76	65.385	Seriola_lalandi_dorsalis
ENSRNOG00000030830	Mex3d	81	60.781	ENSSPUG00000015849	MEX3D	79	61.993	Sphenodon_punctatus
ENSRNOG00000030830	Mex3d	81	51.346	ENSSPAG00000005264	MEX3D	94	51.300	Stegastes_partitus
ENSRNOG00000030830	Mex3d	84	80.108	ENSSSCG00000021750	MEX3D	82	80.108	Sus_scrofa
ENSRNOG00000030830	Mex3d	73	63.320	ENSTGUG00000000201	MEX3D	99	63.673	Taeniopygia_guttata
ENSRNOG00000030830	Mex3d	78	49.711	ENSTRUG00000007986	MEX3D	95	51.832	Takifugu_rubripes
ENSRNOG00000030830	Mex3d	75	51.803	ENSTNIG00000015325	MEX3D	93	52.591	Tetraodon_nigroviridis
ENSRNOG00000030830	Mex3d	77	79.688	ENSTTRG00000008132	MEX3D	99	78.794	Tursiops_truncatus
ENSRNOG00000030830	Mex3d	56	67.442	ENSXCOG00000008198	MEX3D	89	67.442	Xiphophorus_couchianus
ENSRNOG00000030830	Mex3d	78	51.238	ENSXMAG00000025266	MEX3D	96	52.462	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0017091	AU-rich element binding	-	IEA	Function
GO:0017091	AU-rich element binding	-	ISO	Function
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component