EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000031061 (Gene tree)
Gene ID: 306079
Gene Symbol: LOC306079
Alias: LRRGT00066
Full Name: similar to RIKEN cDNA 3100001N19
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 11223 bases
Position: chr15:62520953-62532175
Accession: 1564564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000046600	Ribosomal_L14e	PF01929.17	5.5e-27	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000040851	-	1065	-	ENSRNOP00000046600	354 (aa)	-	Q6TUH8

Gene Model

Click here to download ENSRNOG00000031061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000031061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000031061	LOC306079	59	82.464	ENSRNOG00000032160	AABR07014996.1	99	82.938
ENSRNOG00000031061	LOC306079	59	91.038	ENSRNOG00000019007	Rpl14	99	92.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000031061	LOC306079	59	79.717	ENSG00000188846	RPL14	91	89.381	Homo_sapiens
ENSRNOG00000031061	LOC306079	59	78.095	ENSAMEG00000001709	RPL14	99	77.990	Ailuropoda_melanoleuca
ENSRNOG00000031061	LOC306079	59	65.072	ENSANAG00000034067	-	98	65.550	Aotus_nancymaae
ENSRNOG00000031061	LOC306079	59	67.308	ENSANAG00000036816	-	97	65.865	Aotus_nancymaae
ENSRNOG00000031061	LOC306079	59	77.143	ENSANAG00000027465	-	98	77.512	Aotus_nancymaae
ENSRNOG00000031061	LOC306079	59	64.286	ENSANAG00000031599	-	66	78.030	Aotus_nancymaae
ENSRNOG00000031061	LOC306079	59	79.904	ENSBTAG00000002038	RPL14	98	79.904	Bos_taurus
ENSRNOG00000031061	LOC306079	59	75.829	ENSCJAG00000017884	-	94	84.874	Callithrix_jacchus
ENSRNOG00000031061	LOC306079	59	78.571	ENSCAFG00000015445	-	98	71.889	Canis_familiaris
ENSRNOG00000031061	LOC306079	59	78.571	ENSCAFG00000005138	RPL14	98	71.889	Canis_familiaris
ENSRNOG00000031061	LOC306079	59	78.571	ENSCAFG00020025513	-	98	71.889	Canis_lupus_dingo
ENSRNOG00000031061	LOC306079	59	79.904	ENSCHIG00000019403	-	98	79.904	Capra_hircus
ENSRNOG00000031061	LOC306079	59	66.827	ENSCHIG00000014812	-	97	61.538	Capra_hircus
ENSRNOG00000031061	LOC306079	59	67.788	ENSTSYG00000028278	-	96	66.346	Carlito_syrichta
ENSRNOG00000031061	LOC306079	59	72.115	ENSTSYG00000028474	-	65	83.969	Carlito_syrichta
ENSRNOG00000031061	LOC306079	59	79.621	ENSTSYG00000002161	-	93	90.265	Carlito_syrichta
ENSRNOG00000031061	LOC306079	59	72.768	ENSCPOG00000030681	-	98	73.214	Cavia_porcellus
ENSRNOG00000031061	LOC306079	59	70.000	ENSCCAG00000020763	-	85	78.512	Cebus_capucinus
ENSRNOG00000031061	LOC306079	59	78.571	ENSCCAG00000031843	-	98	78.947	Cebus_capucinus
ENSRNOG00000031061	LOC306079	59	55.660	ENSCATG00000035949	-	83	58.095	Cercocebus_atys
ENSRNOG00000031061	LOC306079	59	67.788	ENSCATG00000041181	-	97	67.308	Cercocebus_atys
ENSRNOG00000031061	LOC306079	56	67.488	ENSCATG00000042197	-	79	83.636	Cercocebus_atys
ENSRNOG00000031061	LOC306079	59	67.143	ENSCATG00000037021	-	98	66.029	Cercocebus_atys
ENSRNOG00000031061	LOC306079	55	76.617	ENSCLAG00000016120	-	60	87.879	Chinchilla_lanigera
ENSRNOG00000031061	LOC306079	59	79.048	ENSCSAG00000016907	-	98	78.469	Chlorocebus_sabaeus
ENSRNOG00000031061	LOC306079	59	80.952	ENSCHOG00000009404	-	98	81.340	Choloepus_hoffmanni
ENSRNOG00000031061	LOC306079	59	76.667	ENSCANG00000012347	-	99	76.077	Colobus_angolensis_palliatus
ENSRNOG00000031061	LOC306079	59	61.611	ENSCANG00000041577	-	78	59.596	Colobus_angolensis_palliatus
ENSRNOG00000031061	LOC306079	59	80.000	ENSCANG00000009336	-	91	89.381	Colobus_angolensis_palliatus
ENSRNOG00000031061	LOC306079	59	74.882	ENSCANG00000043404	-	98	74.882	Colobus_angolensis_palliatus
ENSRNOG00000031061	LOC306079	57	67.822	ENSCANG00000039269	-	89	63.366	Colobus_angolensis_palliatus
ENSRNOG00000031061	LOC306079	57	78.109	ENSCGRG00001000137	Rpl14	99	78.140	Cricetulus_griseus_chok1gshd
ENSRNOG00000031061	LOC306079	57	78.109	ENSCGRG00000013274	Rpl14	99	78.140	Cricetulus_griseus_crigri
ENSRNOG00000031061	LOC306079	56	58.000	ENSDNOG00000038635	-	64	67.442	Dasypus_novemcinctus
ENSRNOG00000031061	LOC306079	57	74.877	ENSDNOG00000046774	-	96	74.877	Dasypus_novemcinctus
ENSRNOG00000031061	LOC306079	59	72.857	ENSETEG00000003758	-	64	84.848	Echinops_telfairi
ENSRNOG00000031061	LOC306079	55	75.377	ENSETEG00000006352	-	61	88.235	Echinops_telfairi
ENSRNOG00000031061	LOC306079	59	76.415	ENSETEG00000012894	-	62	88.636	Echinops_telfairi
ENSRNOG00000031061	LOC306079	59	78.972	ENSEASG00005007625	RPL14	72	69.802	Equus_asinus_asinus
ENSRNOG00000031061	LOC306079	59	79.439	ENSECAG00000026813	RPL14	87	70.149	Equus_caballus
ENSRNOG00000031061	LOC306079	50	53.409	ENSFCAG00000036735	-	74	62.698	Felis_catus
ENSRNOG00000031061	LOC306079	59	78.571	ENSFCAG00000046373	-	70	71.560	Felis_catus
ENSRNOG00000031061	LOC306079	59	79.907	ENSFDAG00000015817	-	98	79.907	Fukomys_damarensis
ENSRNOG00000031061	LOC306079	59	80.952	ENSGGOG00000025958	RPL14	99	80.476	Gorilla_gorilla
ENSRNOG00000031061	LOC306079	59	80.282	ENSHGLG00000014943	RPL14	98	78.302	Heterocephalus_glaber_female
ENSRNOG00000031061	LOC306079	53	67.358	ENSHGLG00000014575	-	97	66.839	Heterocephalus_glaber_female
ENSRNOG00000031061	LOC306079	53	67.358	ENSHGLG00100000190	-	98	66.839	Heterocephalus_glaber_male
ENSRNOG00000031061	LOC306079	59	78.605	ENSSTOG00000021460	-	98	78.972	Ictidomys_tridecemlineatus
ENSRNOG00000031061	LOC306079	59	76.995	ENSJJAG00000009606	Rpl14	99	74.528	Jaculus_jaculus
ENSRNOG00000031061	LOC306079	59	77.465	ENSLAFG00000010371	-	99	75.472	Loxodonta_africana
ENSRNOG00000031061	LOC306079	59	78.571	ENSMFAG00000045720	-	98	77.990	Macaca_fascicularis
ENSRNOG00000031061	LOC306079	59	64.286	ENSMFAG00000002629	-	74	75.000	Macaca_fascicularis
ENSRNOG00000031061	LOC306079	59	79.048	ENSMFAG00000030186	-	98	76.555	Macaca_fascicularis
ENSRNOG00000031061	LOC306079	59	78.571	ENSMMUG00000042008	-	91	89.381	Macaca_mulatta
ENSRNOG00000031061	LOC306079	53	65.957	ENSMMUG00000044355	-	74	75.188	Macaca_mulatta
ENSRNOG00000031061	LOC306079	59	67.143	ENSMNEG00000041277	-	98	66.029	Macaca_nemestrina
ENSRNOG00000031061	LOC306079	56	71.500	ENSMNEG00000039188	-	82	83.607	Macaca_nemestrina
ENSRNOG00000031061	LOC306079	59	59.242	ENSMLEG00000041147	-	66	60.952	Mandrillus_leucophaeus
ENSRNOG00000031061	LOC306079	59	66.190	ENSMLEG00000043313	-	98	64.115	Mandrillus_leucophaeus
ENSRNOG00000031061	LOC306079	59	80.000	ENSMLEG00000037927	-	98	77.512	Mandrillus_leucophaeus
ENSRNOG00000031061	LOC306079	59	78.571	ENSMAUG00000014583	-	99	80.930	Mesocricetus_auratus
ENSRNOG00000031061	LOC306079	59	81.340	ENSMAUG00000009344	-	98	79.904	Mesocricetus_auratus
ENSRNOG00000031061	LOC306079	57	71.921	ENSMICG00000026860	-	98	71.921	Microcebus_murinus
ENSRNOG00000031061	LOC306079	59	79.524	ENSMICG00000048910	-	98	79.904	Microcebus_murinus
ENSRNOG00000031061	LOC306079	59	81.860	ENSMOCG00000001541	-	99	79.535	Microtus_ochrogaster
ENSRNOG00000031061	LOC306079	59	79.048	ENSMOCG00000019950	-	99	79.048	Microtus_ochrogaster
ENSRNOG00000031061	LOC306079	59	82.791	ENSMOCG00000004837	-	99	80.465	Microtus_ochrogaster
ENSRNOG00000031061	LOC306079	59	69.585	ENSMODG00000015262	RPL14	84	70.556	Monodelphis_domestica
ENSRNOG00000031061	LOC306079	59	86.385	MGP_CAROLIEiJ_G0032819	Rpl14	99	84.977	Mus_caroli
ENSRNOG00000031061	LOC306079	59	87.383	ENSMUSG00000025794	Rpl14	99	85.047	Mus_musculus
ENSRNOG00000031061	LOC306079	59	84.507	MGP_PahariEiJ_G0015686	Rpl14	99	84.038	Mus_pahari
ENSRNOG00000031061	LOC306079	59	86.854	MGP_SPRETEiJ_G0033967	Rpl14	99	85.446	Mus_spretus
ENSRNOG00000031061	LOC306079	59	79.426	ENSMPUG00000017961	-	99	72.350	Mustela_putorius_furo
ENSRNOG00000031061	LOC306079	59	79.048	ENSMPUG00000019809	-	98	72.350	Mustela_putorius_furo
ENSRNOG00000031061	LOC306079	54	81.250	ENSMLUG00000014429	RPL14	91	80.928	Myotis_lucifugus
ENSRNOG00000031061	LOC306079	59	63.158	ENSNLEG00000033539	-	84	62.981	Nomascus_leucogenys
ENSRNOG00000031061	LOC306079	59	77.619	ENSNLEG00000005682	-	99	77.512	Nomascus_leucogenys
ENSRNOG00000031061	LOC306079	58	57.212	ENSMEUG00000013305	RPL14	66	59.542	Notamacropus_eugenii
ENSRNOG00000031061	LOC306079	59	77.674	ENSOCUG00000010309	RPL14	98	80.841	Oryctolagus_cuniculus
ENSRNOG00000031061	LOC306079	51	70.166	ENSOGAG00000032650	-	79	69.364	Otolemur_garnettii
ENSRNOG00000031061	LOC306079	59	76.923	ENSOGAG00000024502	-	98	75.000	Otolemur_garnettii
ENSRNOG00000031061	LOC306079	53	72.043	ENSPPAG00000019205	-	91	71.505	Pan_paniscus
ENSRNOG00000031061	LOC306079	59	78.469	ENSPPAG00000029385	-	99	77.512	Pan_paniscus
ENSRNOG00000031061	LOC306079	59	68.421	ENSPPAG00000033463	-	83	80.000	Pan_paniscus
ENSRNOG00000031061	LOC306079	59	78.571	ENSPPRG00000002588	-	98	71.889	Panthera_pardus
ENSRNOG00000031061	LOC306079	59	78.571	ENSPTIG00000005357	RPL14	98	71.889	Panthera_tigris_altaica
ENSRNOG00000031061	LOC306079	53	70.430	ENSPTRG00000043616	-	91	69.892	Pan_troglodytes
ENSRNOG00000031061	LOC306079	59	77.990	ENSPTRG00000011963	RPL14	99	77.990	Pan_troglodytes
ENSRNOG00000031061	LOC306079	59	68.421	ENSPTRG00000045152	-	83	80.000	Pan_troglodytes
ENSRNOG00000031061	LOC306079	59	67.619	ENSPANG00000031302	-	98	66.507	Papio_anubis
ENSRNOG00000031061	LOC306079	59	80.000	ENSPANG00000034352	-	98	80.383	Papio_anubis
ENSRNOG00000031061	LOC306079	59	85.648	ENSPEMG00000016182	-	99	86.047	Peromyscus_maniculatus_bairdii
ENSRNOG00000031061	LOC306079	57	63.547	ENSPCIG00000028905	-	64	75.969	Phascolarctos_cinereus
ENSRNOG00000031061	LOC306079	59	70.561	ENSPCIG00000010324	-	62	82.443	Phascolarctos_cinereus
ENSRNOG00000031061	LOC306079	59	73.853	ENSPCAG00000017095	-	60	87.786	Procavia_capensis
ENSRNOG00000031061	LOC306079	59	78.095	ENSPCOG00000004503	-	98	78.469	Propithecus_coquereli
ENSRNOG00000031061	LOC306079	58	63.208	ENSPCOG00000013895	-	81	77.064	Propithecus_coquereli
ENSRNOG00000031061	LOC306079	56	63.131	ENSPCOG00000024624	-	58	72.131	Propithecus_coquereli
ENSRNOG00000031061	LOC306079	59	79.048	ENSPVAG00000013914	RPL14	98	78.469	Pteropus_vampyrus
ENSRNOG00000031061	LOC306079	59	73.934	ENSRBIG00000029110	-	98	73.934	Rhinopithecus_bieti
ENSRNOG00000031061	LOC306079	59	77.143	ENSRBIG00000007466	-	98	73.953	Rhinopithecus_bieti
ENSRNOG00000031061	LOC306079	59	78.571	ENSRBIG00000024165	-	98	77.990	Rhinopithecus_bieti
ENSRNOG00000031061	LOC306079	59	60.664	ENSRBIG00000029802	-	79	59.091	Rhinopithecus_bieti
ENSRNOG00000031061	LOC306079	59	77.512	ENSRROG00000017304	-	98	73.953	Rhinopithecus_roxellana
ENSRNOG00000031061	LOC306079	59	79.048	ENSRROG00000042198	-	98	78.469	Rhinopithecus_roxellana
ENSRNOG00000031061	LOC306079	59	67.464	ENSRROG00000002457	-	98	66.986	Rhinopithecus_roxellana
ENSRNOG00000031061	LOC306079	59	68.868	ENSSBOG00000029599	-	89	78.814	Saimiri_boliviensis_boliviensis
ENSRNOG00000031061	LOC306079	59	77.619	ENSSBOG00000035638	-	98	77.990	Saimiri_boliviensis_boliviensis
ENSRNOG00000031061	LOC306079	53	74.074	ENSSARG00000003974	-	88	77.457	Sorex_araneus
ENSRNOG00000031061	LOC306079	59	80.476	ENSSSCG00000011272	-	98	80.861	Sus_scrofa
ENSRNOG00000031061	LOC306079	59	78.095	ENSSSCG00000029003	-	98	78.469	Sus_scrofa
ENSRNOG00000031061	LOC306079	57	57.921	ENSSSCG00000032925	-	83	54.386	Sus_scrofa
ENSRNOG00000031061	LOC306079	59	76.077	ENSTTRG00000006708	RPL14	98	76.442	Tursiops_truncatus
ENSRNOG00000031061	LOC306079	59	78.095	ENSUAMG00000013664	RPL14	98	77.990	Ursus_americanus
ENSRNOG00000031061	LOC306079	59	77.143	ENSVVUG00000005464	-	99	76.555	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0006412	translation	-	IEA	Process
GO:0022625	cytosolic large ribosomal subunit	21873635.	IBA	Component
GO:0042273	ribosomal large subunit biogenesis	21873635.	IBA	Process