EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000031544 (Gene tree)
Gene ID: 303158
Gene Symbol: Larp1
Alias: LOC303158|RGD1306683
Full Name: La ribonucleoprotein domain family%2C member 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 51541 bases
Position: chr10:43446526-43498066
Accession: 1306683
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000037598	La	PF05383.17	8.8e-21	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000036959	-	3178	XM_008767745	ENSRNOP00000037598	931 (aa)	-	F1M062

Gene Model

Click here to download ENSRNOG00000031544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000031544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000031544	Larp1	99	92.059	ENSG00000155506	LARP1	100	93.478	Homo_sapiens
ENSRNOG00000031544	Larp1	85	82.143	ENSAPOG00000020685	larp1	86	82.143	Acanthochromis_polyacanthus
ENSRNOG00000031544	Larp1	99	92.461	ENSAMEG00000016673	LARP1	99	92.565	Ailuropoda_melanoleuca
ENSRNOG00000031544	Larp1	98	66.957	ENSACIG00000012994	larp1	85	66.957	Amphilophus_citrinellus
ENSRNOG00000031544	Larp1	77	74.362	ENSAOCG00000007792	larp1	88	74.362	Amphiprion_ocellaris
ENSRNOG00000031544	Larp1	96	66.526	ENSAPEG00000022246	larp1	87	66.526	Amphiprion_percula
ENSRNOG00000031544	Larp1	96	65.839	ENSATEG00000013523	larp1	84	67.312	Anabas_testudineus
ENSRNOG00000031544	Larp1	92	81.369	ENSAPLG00000007559	LARP1	99	81.481	Anas_platyrhynchos
ENSRNOG00000031544	Larp1	99	76.704	ENSACAG00000004071	LARP1	100	76.108	Anolis_carolinensis
ENSRNOG00000031544	Larp1	99	92.476	ENSANAG00000029949	LARP1	99	91.137	Aotus_nancymaae
ENSRNOG00000031544	Larp1	98	65.676	ENSACLG00000015256	larp1	98	64.753	Astatotilapia_calliptera
ENSRNOG00000031544	Larp1	94	69.700	ENSAMXG00000000859	larp1	85	69.700	Astyanax_mexicanus
ENSRNOG00000031544	Larp1	99	91.736	ENSBTAG00000008443	LARP1	87	92.364	Bos_taurus
ENSRNOG00000031544	Larp1	99	92.469	ENSCJAG00000004454	LARP1	94	92.476	Callithrix_jacchus
ENSRNOG00000031544	Larp1	99	93.082	ENSCAFG00000017639	LARP1	99	93.082	Canis_familiaris
ENSRNOG00000031544	Larp1	92	92.961	ENSCAFG00020023860	LARP1	100	92.961	Canis_lupus_dingo
ENSRNOG00000031544	Larp1	99	91.736	ENSCHIG00000014414	LARP1	88	92.025	Capra_hircus
ENSRNOG00000031544	Larp1	99	95.269	ENSTSYG00000013732	LARP1	99	95.269	Carlito_syrichta
ENSRNOG00000031544	Larp1	93	85.635	ENSCAPG00000013865	LARP1	92	85.699	Cavia_aperea
ENSRNOG00000031544	Larp1	99	93.389	ENSCPOG00000003377	LARP1	99	93.389	Cavia_porcellus
ENSRNOG00000031544	Larp1	99	92.573	ENSCCAG00000025201	LARP1	94	92.581	Cebus_capucinus
ENSRNOG00000031544	Larp1	99	95.558	ENSCATG00000030675	LARP1	94	92.163	Cercocebus_atys
ENSRNOG00000031544	Larp1	99	96.241	ENSCLAG00000012755	LARP1	99	96.241	Chinchilla_lanigera
ENSRNOG00000031544	Larp1	92	95.708	ENSCSAG00000010800	LARP1	100	95.708	Chlorocebus_sabaeus
ENSRNOG00000031544	Larp1	95	84.604	ENSCHOG00000012716	LARP1	88	84.604	Choloepus_hoffmanni
ENSRNOG00000031544	Larp1	99	78.415	ENSCPBG00000002173	LARP1	94	78.586	Chrysemys_picta_bellii
ENSRNOG00000031544	Larp1	99	92.163	ENSCANG00000037418	LARP1	94	92.268	Colobus_angolensis_palliatus
ENSRNOG00000031544	Larp1	99	94.869	ENSCGRG00001016913	Larp1	89	94.869	Cricetulus_griseus_chok1gshd
ENSRNOG00000031544	Larp1	95	92.990	ENSCGRG00000009916	Larp1	100	92.990	Cricetulus_griseus_crigri
ENSRNOG00000031544	Larp1	97	66.044	ENSCSEG00000016431	larp1	88	65.942	Cynoglossus_semilaevis
ENSRNOG00000031544	Larp1	98	67.045	ENSCVAG00000022687	larp1	87	67.789	Cyprinodon_variegatus
ENSRNOG00000031544	Larp1	98	64.592	ENSDARG00000101722	larp1	92	64.592	Danio_rerio
ENSRNOG00000031544	Larp1	99	90.501	ENSDNOG00000012073	LARP1	87	90.605	Dasypus_novemcinctus
ENSRNOG00000031544	Larp1	100	95.299	ENSDORG00000002897	Larp1	100	95.299	Dipodomys_ordii
ENSRNOG00000031544	Larp1	91	92.159	ENSETEG00000020251	LARP1	100	92.273	Echinops_telfairi
ENSRNOG00000031544	Larp1	99	92.992	ENSEASG00005001070	LARP1	87	92.992	Equus_asinus_asinus
ENSRNOG00000031544	Larp1	99	92.992	ENSECAG00000017002	LARP1	69	92.992	Equus_caballus
ENSRNOG00000031544	Larp1	97	86.924	ENSEEUG00000001065	LARP1	100	86.924	Erinaceus_europaeus
ENSRNOG00000031544	Larp1	98	64.876	ENSELUG00000019403	larp1	87	66.632	Esox_lucius
ENSRNOG00000031544	Larp1	99	92.573	ENSFCAG00000000592	LARP1	94	92.691	Felis_catus
ENSRNOG00000031544	Larp1	86	78.121	ENSFALG00000008335	LARP1	99	78.240	Ficedula_albicollis
ENSRNOG00000031544	Larp1	99	93.075	ENSFDAG00000021125	LARP1	99	93.075	Fukomys_damarensis
ENSRNOG00000031544	Larp1	57	56.387	ENSFHEG00000020307	larp1	92	63.743	Fundulus_heteroclitus
ENSRNOG00000031544	Larp1	99	78.986	ENSGALG00000040109	LARP1	95	77.003	Gallus_gallus
ENSRNOG00000031544	Larp1	99	77.882	ENSGAGG00000025113	LARP1	100	77.381	Gopherus_agassizii
ENSRNOG00000031544	Larp1	99	92.059	ENSGGOG00000006048	LARP1	94	92.163	Gorilla_gorilla
ENSRNOG00000031544	Larp1	98	65.911	ENSHBUG00000020762	larp1	97	67.723	Haplochromis_burtoni
ENSRNOG00000031544	Larp1	98	92.251	ENSHGLG00000006267	LARP1	86	92.251	Heterocephalus_glaber_female
ENSRNOG00000031544	Larp1	98	80.769	ENSHGLG00100003395	-	87	80.525	Heterocephalus_glaber_male
ENSRNOG00000031544	Larp1	99	93.179	ENSHGLG00100014230	-	99	93.179	Heterocephalus_glaber_male
ENSRNOG00000031544	Larp1	88	79.529	ENSHCOG00000010786	larp1	85	79.529	Hippocampus_comes
ENSRNOG00000031544	Larp1	96	66.703	ENSIPUG00000019105	Larp1	91	66.703	Ictalurus_punctatus
ENSRNOG00000031544	Larp1	99	96.882	ENSSTOG00000005678	LARP1	99	96.882	Ictidomys_tridecemlineatus
ENSRNOG00000031544	Larp1	99	87.749	ENSJJAG00000016950	Larp1	90	87.853	Jaculus_jaculus
ENSRNOG00000031544	Larp1	86	76.869	ENSKMAG00000018468	larp1	96	65.531	Kryptolebias_marmoratus
ENSRNOG00000031544	Larp1	96	66.596	ENSLBEG00000027172	larp1	85	66.596	Labrus_bergylta
ENSRNOG00000031544	Larp1	92	72.595	ENSLOCG00000012457	larp1	90	72.595	Lepisosteus_oculatus
ENSRNOG00000031544	Larp1	99	90.900	ENSLAFG00000008991	LARP1	89	91.004	Loxodonta_africana
ENSRNOG00000031544	Larp1	99	91.745	ENSMFAG00000031651	LARP1	94	91.850	Macaca_fascicularis
ENSRNOG00000031544	Larp1	99	95.125	ENSMMUG00000009411	LARP1	99	95.125	Macaca_mulatta
ENSRNOG00000031544	Larp1	99	88.041	ENSMNEG00000039294	LARP1	100	91.620	Macaca_nemestrina
ENSRNOG00000031544	Larp1	99	92.163	ENSMLEG00000035142	LARP1	94	92.268	Mandrillus_leucophaeus
ENSRNOG00000031544	Larp1	99	65.416	ENSMAMG00000021788	larp1	87	66.116	Mastacembelus_armatus
ENSRNOG00000031544	Larp1	98	65.676	ENSMZEG00005009345	larp1	98	64.753	Maylandia_zebra
ENSRNOG00000031544	Larp1	99	78.261	ENSMGAG00000005696	LARP1	99	78.364	Meleagris_gallopavo
ENSRNOG00000031544	Larp1	99	94.869	ENSMAUG00000001385	Larp1	89	94.869	Mesocricetus_auratus
ENSRNOG00000031544	Larp1	99	92.865	ENSMICG00000000837	LARP1	99	92.721	Microcebus_murinus
ENSRNOG00000031544	Larp1	99	94.974	ENSMOCG00000008920	Larp1	89	94.974	Microtus_ochrogaster
ENSRNOG00000031544	Larp1	81	58.963	ENSMMOG00000013364	larp1	78	57.092	Mola_mola
ENSRNOG00000031544	Larp1	99	80.645	ENSMODG00000008663	LARP1	99	80.645	Monodelphis_domestica
ENSRNOG00000031544	Larp1	93	70.332	ENSMALG00000017180	larp1	95	70.332	Monopterus_albus
ENSRNOG00000031544	Larp1	99	94.869	MGP_CAROLIEiJ_G0016383	Larp1	89	94.869	Mus_caroli
ENSRNOG00000031544	Larp1	99	94.869	ENSMUSG00000037331	Larp1	89	94.869	Mus_musculus
ENSRNOG00000031544	Larp1	99	95.288	MGP_PahariEiJ_G0017518	Larp1	89	95.288	Mus_pahari
ENSRNOG00000031544	Larp1	99	95.079	MGP_SPRETEiJ_G0017225	Larp1	89	95.079	Mus_spretus
ENSRNOG00000031544	Larp1	78	91.963	ENSMPUG00000013564	LARP1	84	92.095	Mustela_putorius_furo
ENSRNOG00000031544	Larp1	98	88.655	ENSMLUG00000002608	LARP1	99	88.655	Myotis_lucifugus
ENSRNOG00000031544	Larp1	99	95.896	ENSNGAG00000001098	Larp1	99	95.896	Nannospalax_galili
ENSRNOG00000031544	Larp1	95	65.916	ENSNBRG00000008963	larp1	91	66.667	Neolamprologus_brichardi
ENSRNOG00000031544	Larp1	99	91.757	ENSNLEG00000016588	LARP1	99	92.842	Nomascus_leucogenys
ENSRNOG00000031544	Larp1	99	74.816	ENSMEUG00000002957	LARP1	99	74.816	Notamacropus_eugenii
ENSRNOG00000031544	Larp1	99	93.179	ENSOPRG00000013014	LARP1	99	93.179	Ochotona_princeps
ENSRNOG00000031544	Larp1	99	92.235	ENSODEG00000010824	LARP1	99	92.340	Octodon_degus
ENSRNOG00000031544	Larp1	98	67.432	ENSONIG00000017308	larp1	87	67.432	Oreochromis_niloticus
ENSRNOG00000031544	Larp1	99	80.269	ENSOANG00000005096	LARP1	98	80.682	Ornithorhynchus_anatinus
ENSRNOG00000031544	Larp1	99	97.075	ENSOCUG00000013066	LARP1	87	97.075	Oryctolagus_cuniculus
ENSRNOG00000031544	Larp1	98	65.385	ENSORLG00000000824	larp1	98	67.815	Oryzias_latipes
ENSRNOG00000031544	Larp1	98	65.385	ENSORLG00020022241	larp1	87	65.385	Oryzias_latipes_hni
ENSRNOG00000031544	Larp1	98	65.349	ENSORLG00015007538	larp1	87	65.349	Oryzias_latipes_hsok
ENSRNOG00000031544	Larp1	98	64.573	ENSOMEG00000003134	larp1	88	65.317	Oryzias_melastigma
ENSRNOG00000031544	Larp1	99	92.445	ENSOGAG00000016750	LARP1	99	92.550	Otolemur_garnettii
ENSRNOG00000031544	Larp1	99	92.421	ENSOARG00000009893	LARP1	100	92.842	Ovis_aries
ENSRNOG00000031544	Larp1	99	92.059	ENSPPAG00000042993	LARP1	94	92.163	Pan_paniscus
ENSRNOG00000031544	Larp1	99	92.558	ENSPPRG00000009780	LARP1	94	92.558	Panthera_pardus
ENSRNOG00000031544	Larp1	99	93.053	ENSPTIG00000007013	LARP1	94	93.053	Panthera_tigris_altaica
ENSRNOG00000031544	Larp1	99	95.450	ENSPTRG00000017447	LARP1	94	92.059	Pan_troglodytes
ENSRNOG00000031544	Larp1	99	95.558	ENSPANG00000008080	LARP1	94	92.163	Papio_anubis
ENSRNOG00000031544	Larp1	97	65.755	ENSPKIG00000017153	-	85	67.630	Paramormyrops_kingsleyae
ENSRNOG00000031544	Larp1	98	67.430	ENSPKIG00000010096	larp1	87	68.723	Paramormyrops_kingsleyae
ENSRNOG00000031544	Larp1	93	67.333	ENSPMGG00000011599	larp1	90	67.333	Periophthalmus_magnuspinnatus
ENSRNOG00000031544	Larp1	99	97.955	ENSPEMG00000022523	Larp1	100	97.955	Peromyscus_maniculatus_bairdii
ENSRNOG00000031544	Larp1	96	83.147	ENSPCIG00000019242	LARP1	77	83.147	Phascolarctos_cinereus
ENSRNOG00000031544	Larp1	95	65.690	ENSPFOG00000005836	larp1	87	64.826	Poecilia_formosa
ENSRNOG00000031544	Larp1	95	67.500	ENSPLAG00000008936	larp1	87	65.762	Poecilia_latipinna
ENSRNOG00000031544	Larp1	95	66.143	ENSPMEG00000013656	larp1	87	65.369	Poecilia_mexicana
ENSRNOG00000031544	Larp1	95	65.759	ENSPREG00000005726	larp1	98	64.598	Poecilia_reticulata
ENSRNOG00000031544	Larp1	99	87.093	ENSPCAG00000006407	LARP1	99	87.198	Procavia_capensis
ENSRNOG00000031544	Larp1	99	84.575	ENSPCOG00000016949	LARP1	99	88.248	Propithecus_coquereli
ENSRNOG00000031544	Larp1	99	92.163	ENSPVAG00000002262	LARP1	87	92.268	Pteropus_vampyrus
ENSRNOG00000031544	Larp1	98	65.574	ENSPNYG00000007938	larp1	98	64.653	Pundamilia_nyererei
ENSRNOG00000031544	Larp1	98	68.371	ENSPNAG00000021427	larp1	89	68.371	Pygocentrus_nattereri
ENSRNOG00000031544	Larp1	99	92.059	ENSRBIG00000038005	LARP1	94	92.163	Rhinopithecus_bieti
ENSRNOG00000031544	Larp1	99	92.059	ENSRROG00000034073	LARP1	100	91.955	Rhinopithecus_roxellana
ENSRNOG00000031544	Larp1	99	95.987	ENSSBOG00000019816	LARP1	99	95.987	Saimiri_boliviensis_boliviensis
ENSRNOG00000031544	Larp1	99	82.094	ENSSHAG00000011115	LARP1	99	82.094	Sarcophilus_harrisii
ENSRNOG00000031544	Larp1	95	67.049	ENSSFOG00015020304	larp1	95	64.854	Scleropages_formosus
ENSRNOG00000031544	Larp1	98	66.667	ENSSFOG00015018058	-	87	66.667	Scleropages_formosus
ENSRNOG00000031544	Larp1	92	66.965	ENSSMAG00000007468	larp1	84	67.771	Scophthalmus_maximus
ENSRNOG00000031544	Larp1	98	65.121	ENSSDUG00000000268	larp1	97	68.581	Seriola_dumerili
ENSRNOG00000031544	Larp1	79	75.304	ENSSLDG00000016505	larp1	97	68.464	Seriola_lalandi_dorsalis
ENSRNOG00000031544	Larp1	65	92.933	ENSSARG00000013907	-	89	93.252	Sorex_araneus
ENSRNOG00000031544	Larp1	99	78.549	ENSSPUG00000012179	-	85	78.653	Sphenodon_punctatus
ENSRNOG00000031544	Larp1	98	65.779	ENSSPAG00000003910	larp1	87	64.859	Stegastes_partitus
ENSRNOG00000031544	Larp1	99	92.476	ENSSSCG00000017069	LARP1	100	92.411	Sus_scrofa
ENSRNOG00000031544	Larp1	95	80.786	ENSTGUG00000000704	LARP1	100	80.786	Taeniopygia_guttata
ENSRNOG00000031544	Larp1	98	64.607	ENSTRUG00000009470	larp1	86	64.607	Takifugu_rubripes
ENSRNOG00000031544	Larp1	91	90.837	ENSTBEG00000003381	LARP1	99	90.950	Tupaia_belangeri
ENSRNOG00000031544	Larp1	97	92.667	ENSTTRG00000015934	LARP1	99	92.550	Tursiops_truncatus
ENSRNOG00000031544	Larp1	99	92.678	ENSUAMG00000019334	LARP1	87	92.782	Ursus_americanus
ENSRNOG00000031544	Larp1	98	95.728	ENSUMAG00000002934	LARP1	99	95.125	Ursus_maritimus
ENSRNOG00000031544	Larp1	92	92.961	ENSVVUG00000004644	LARP1	100	92.961	Vulpes_vulpes
ENSRNOG00000031544	Larp1	99	73.137	ENSXETG00000008413	larp1	91	73.137	Xenopus_tropicalis
ENSRNOG00000031544	Larp1	79	72.813	ENSXCOG00000004022	larp1	80	72.813	Xiphophorus_couchianus
ENSRNOG00000031544	Larp1	95	65.618	ENSXMAG00000018780	larp1	87	64.264	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000339	RNA cap binding	-	ISO	Function
GO:0000340	RNA 7-methylguanosine cap binding	-	IEA	Function
GO:0003730	mRNA 3'-UTR binding	-	IEA	Function
GO:0003730	mRNA 3'-UTR binding	-	ISO	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005844	polysome	-	ISO	Component
GO:0006413	translational initiation	-	IEA	Process
GO:0006413	translational initiation	-	ISO	Process
GO:0008190	eukaryotic initiation factor 4E binding	-	IEA	Function
GO:0008190	eukaryotic initiation factor 4E binding	-	ISO	Function
GO:0008283	cell proliferation	-	IEA	Process
GO:0008283	cell proliferation	-	ISO	Process
GO:0008494	translation activator activity	-	IEA	Function
GO:0008494	translation activator activity	-	ISO	Function
GO:0010494	cytoplasmic stress granule	-	IEA	Component
GO:0010494	cytoplasmic stress granule	-	ISO	Component
GO:0016239	positive regulation of macroautophagy	-	IEA	Process
GO:0016239	positive regulation of macroautophagy	-	ISO	Process
GO:0017148	negative regulation of translation	-	ISO	Process
GO:0031369	translation initiation factor binding	-	ISO	Function
GO:0031929	TOR signaling	-	ISO	Process
GO:0031931	TORC1 complex	-	IEA	Component
GO:0031931	TORC1 complex	-	ISO	Component
GO:0038202	TORC1 signaling	-	IEA	Process
GO:0038202	TORC1 signaling	-	ISO	Process
GO:0042788	polysomal ribosome	-	IEA	Component
GO:0043024	ribosomal small subunit binding	-	IEA	Function
GO:0045070	positive regulation of viral genome replication	-	IEA	Process
GO:0045070	positive regulation of viral genome replication	-	ISO	Process
GO:0045727	positive regulation of translation	-	IEA	Process
GO:0045947	negative regulation of translational initiation	-	IEA	Process
GO:0048027	mRNA 5'-UTR binding	-	IEA	Function
GO:0048027	mRNA 5'-UTR binding	-	ISO	Function
GO:0048255	mRNA stabilization	-	IEA	Process
GO:0048255	mRNA stabilization	-	ISO	Process
GO:0072752	cellular response to rapamycin	-	IEA	Process
GO:0072752	cellular response to rapamycin	-	ISO	Process
GO:1990928	response to amino acid starvation	-	IEA	Process
GO:1990928	response to amino acid starvation	-	ISO	Process