EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000032034 (Gene tree)
Gene ID: 308472
Gene Symbol: Supt5h
Alias: -
Full Name: SPT5 homolog%2C DSIF elongation factor subunit
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 29075 bases
Position: chr1:85437780-85466854
Accession: 1563807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000049521	KOW	PF00467.29	1.6e-30	1	1
ENSRNOP00000076244	KOW	PF00467.29	5.3e-17	1	1
ENSRNOP00000076183	KOW	PF00467.29	7e-15	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000048905	-	3252	-	ENSRNOP00000049521	1083 (aa)	-	E9PTB2
ENSRNOT00000093384	-	1797	-	ENSRNOP00000076183	525 (aa)	-	A0A1W2Q689
ENSRNOT00000093383	-	2541	-	-	- (aa)	-	-
ENSRNOT00000093740	-	1628	-	ENSRNOP00000076244	515 (aa)	-	A0A1W2Q6F0
ENSRNOT00000093345	-	1762	-	-	- (aa)	-	-

Gene Model

Click here to download ENSRNOG00000032034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000032034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000032034	Supt5h	100	98.837	ENSG00000196235	SUPT5H	100	100.000	Homo_sapiens
ENSRNOG00000032034	Supt5h	99	79.771	ENSAPOG00000012970	supt5h	96	78.452	Acanthochromis_polyacanthus
ENSRNOG00000032034	Supt5h	100	98.646	ENSAMEG00000008382	SUPT5H	100	94.582	Ailuropoda_melanoleuca
ENSRNOG00000032034	Supt5h	88	85.495	ENSACIG00000021245	supt5h	93	65.984	Amphilophus_citrinellus
ENSRNOG00000032034	Supt5h	99	85.824	ENSAOCG00000001136	supt5h	96	81.934	Amphiprion_ocellaris
ENSRNOG00000032034	Supt5h	99	86.069	ENSAPEG00000021060	supt5h	96	78.627	Amphiprion_percula
ENSRNOG00000032034	Supt5h	99	85.824	ENSATEG00000002626	supt5h	99	82.841	Anabas_testudineus
ENSRNOG00000032034	Supt5h	100	93.398	ENSACAG00000000375	SUPT5H	100	89.852	Anolis_carolinensis
ENSRNOG00000032034	Supt5h	100	98.643	ENSANAG00000033469	SUPT5H	100	94.490	Aotus_nancymaae
ENSRNOG00000032034	Supt5h	99	84.895	ENSACLG00000011374	supt5h	95	81.943	Astatotilapia_calliptera
ENSRNOG00000032034	Supt5h	99	87.739	ENSAMXG00000009128	supt5h	99	84.381	Astyanax_mexicanus
ENSRNOG00000032034	Supt5h	100	99.031	ENSBTAG00000010467	SUPT5H	100	94.582	Bos_taurus
ENSRNOG00000032034	Supt5h	99	31.278	WBGene00005015	spt-5	90	37.835	Caenorhabditis_elegans
ENSRNOG00000032034	Supt5h	100	98.837	ENSCJAG00000014182	SUPT5H	100	94.582	Callithrix_jacchus
ENSRNOG00000032034	Supt5h	100	98.643	ENSCAFG00000005469	SUPT5H	100	94.490	Canis_familiaris
ENSRNOG00000032034	Supt5h	98	96.063	ENSCAFG00020015732	SUPT5H	99	93.090	Canis_lupus_dingo
ENSRNOG00000032034	Supt5h	100	99.031	ENSCHIG00000023821	SUPT5H	100	94.582	Capra_hircus
ENSRNOG00000032034	Supt5h	97	97.012	ENSTSYG00000010636	SUPT5H	99	93.116	Carlito_syrichta
ENSRNOG00000032034	Supt5h	95	99.593	ENSCAPG00000008285	SUPT5H	100	92.481	Cavia_aperea
ENSRNOG00000032034	Supt5h	100	99.225	ENSCPOG00000011367	SUPT5H	100	94.399	Cavia_porcellus
ENSRNOG00000032034	Supt5h	100	98.837	ENSCCAG00000034052	SUPT5H	100	94.582	Cebus_capucinus
ENSRNOG00000032034	Supt5h	100	99.031	ENSCATG00000035589	SUPT5H	100	94.674	Cercocebus_atys
ENSRNOG00000032034	Supt5h	100	99.031	ENSCLAG00000013796	SUPT5H	100	94.307	Chinchilla_lanigera
ENSRNOG00000032034	Supt5h	100	99.031	ENSCSAG00000003826	SUPT5H	100	94.674	Chlorocebus_sabaeus
ENSRNOG00000032034	Supt5h	100	92.816	ENSCPBG00000018792	SUPT5H	100	92.205	Chrysemys_picta_bellii
ENSRNOG00000032034	Supt5h	100	60.902	ENSCING00000021624	-	93	59.169	Ciona_intestinalis
ENSRNOG00000032034	Supt5h	99	64.423	ENSCSAVG00000000030	-	99	56.777	Ciona_savignyi
ENSRNOG00000032034	Supt5h	100	99.031	ENSCANG00000043752	SUPT5H	100	94.674	Colobus_angolensis_palliatus
ENSRNOG00000032034	Supt5h	100	99.240	ENSCGRG00001012522	Supt5	100	95.764	Cricetulus_griseus_chok1gshd
ENSRNOG00000032034	Supt5h	100	99.240	ENSCGRG00000006779	Supt5	94	96.282	Cricetulus_griseus_crigri
ENSRNOG00000032034	Supt5h	88	67.473	ENSCSEG00000017151	-	94	63.613	Cynoglossus_semilaevis
ENSRNOG00000032034	Supt5h	99	79.735	ENSCSEG00000015699	supt5h	97	78.080	Cynoglossus_semilaevis
ENSRNOG00000032034	Supt5h	99	83.939	ENSCVAG00000007501	supt5h	94	83.610	Cyprinodon_variegatus
ENSRNOG00000032034	Supt5h	99	84.762	ENSDARG00000042724	supt5h	99	83.487	Danio_rerio
ENSRNOG00000032034	Supt5h	100	98.646	ENSDNOG00000033920	SUPT5H	100	94.179	Dasypus_novemcinctus
ENSRNOG00000032034	Supt5h	100	97.282	ENSDORG00000016582	Supt5	100	88.490	Dipodomys_ordii
ENSRNOG00000032034	Supt5h	87	60.000	FBgn0040273	Spt5	90	52.220	Drosophila_melanogaster
ENSRNOG00000032034	Supt5h	57	95.000	ENSETEG00000009497	-	54	95.000	Echinops_telfairi
ENSRNOG00000032034	Supt5h	99	72.222	ENSEBUG00000011892	supt5h	99	72.297	Eptatretus_burgeri
ENSRNOG00000032034	Supt5h	100	96.705	ENSEASG00005011861	SUPT5H	100	93.700	Equus_asinus_asinus
ENSRNOG00000032034	Supt5h	100	96.705	ENSECAG00000013309	SUPT5H	100	94.198	Equus_caballus
ENSRNOG00000032034	Supt5h	100	93.359	ENSEEUG00000012879	SUPT5H	97	83.757	Erinaceus_europaeus
ENSRNOG00000032034	Supt5h	99	86.973	ENSELUG00000011402	supt5h	99	83.119	Esox_lucius
ENSRNOG00000032034	Supt5h	100	98.837	ENSFCAG00000010744	SUPT5H	100	94.582	Felis_catus
ENSRNOG00000032034	Supt5h	100	99.225	ENSFDAG00000015803	SUPT5H	100	94.307	Fukomys_damarensis
ENSRNOG00000032034	Supt5h	99	84.483	ENSFHEG00000012497	supt5h	95	82.318	Fundulus_heteroclitus
ENSRNOG00000032034	Supt5h	100	85.880	ENSGMOG00000003422	supt5h	93	71.040	Gadus_morhua
ENSRNOG00000032034	Supt5h	88	89.868	ENSGACG00000004934	supt5h	99	76.304	Gasterosteus_aculeatus
ENSRNOG00000032034	Supt5h	99	91.603	ENSGAGG00000019112	SUPT5H	99	92.308	Gopherus_agassizii
ENSRNOG00000032034	Supt5h	100	98.837	ENSGGOG00000014425	SUPT5H	100	94.215	Gorilla_gorilla
ENSRNOG00000032034	Supt5h	99	85.057	ENSHBUG00000017144	supt5h	94	85.182	Haplochromis_burtoni
ENSRNOG00000032034	Supt5h	100	99.225	ENSHGLG00000018339	SUPT5H	100	94.399	Heterocephalus_glaber_female
ENSRNOG00000032034	Supt5h	100	99.031	ENSHGLG00100017126	SUPT5H	100	93.756	Heterocephalus_glaber_male
ENSRNOG00000032034	Supt5h	99	83.333	ENSHCOG00000004932	supt5h	94	83.415	Hippocampus_comes
ENSRNOG00000032034	Supt5h	99	87.548	ENSIPUG00000007308	supt5h	94	86.149	Ictalurus_punctatus
ENSRNOG00000032034	Supt5h	100	98.837	ENSSTOG00000026638	SUPT5H	100	94.490	Ictidomys_tridecemlineatus
ENSRNOG00000032034	Supt5h	100	98.837	ENSJJAG00000022374	Supt5	100	95.492	Jaculus_jaculus
ENSRNOG00000032034	Supt5h	99	82.510	ENSKMAG00000004401	supt5h	94	81.250	Kryptolebias_marmoratus
ENSRNOG00000032034	Supt5h	100	89.922	ENSLACG00000008663	SUPT5H	100	86.544	Latimeria_chalumnae
ENSRNOG00000032034	Supt5h	88	92.699	ENSLOCG00000014703	SUPT5H	87	86.812	Lepisosteus_oculatus
ENSRNOG00000032034	Supt5h	100	95.841	ENSLAFG00000027736	SUPT5H	100	90.576	Loxodonta_africana
ENSRNOG00000032034	Supt5h	100	99.031	ENSMFAG00000038707	SUPT5H	100	94.674	Macaca_fascicularis
ENSRNOG00000032034	Supt5h	100	99.031	ENSMMUG00000019372	SUPT5H	100	94.674	Macaca_mulatta
ENSRNOG00000032034	Supt5h	100	99.031	ENSMNEG00000041553	SUPT5H	100	94.674	Macaca_nemestrina
ENSRNOG00000032034	Supt5h	100	99.031	ENSMLEG00000036432	SUPT5H	100	94.674	Mandrillus_leucophaeus
ENSRNOG00000032034	Supt5h	99	85.851	ENSMAMG00000019715	supt5h	94	85.517	Mastacembelus_armatus
ENSRNOG00000032034	Supt5h	99	85.057	ENSMZEG00005024864	supt5h	94	85.015	Maylandia_zebra
ENSRNOG00000032034	Supt5h	100	96.139	ENSMGAG00000012449	SUPT5H	100	90.424	Meleagris_gallopavo
ENSRNOG00000032034	Supt5h	100	95.922	ENSMAUG00000009006	Supt5	100	90.783	Mesocricetus_auratus
ENSRNOG00000032034	Supt5h	100	98.837	ENSMICG00000006115	SUPT5H	100	94.582	Microcebus_murinus
ENSRNOG00000032034	Supt5h	100	99.430	ENSMOCG00000012211	Supt5	100	96.221	Microtus_ochrogaster
ENSRNOG00000032034	Supt5h	99	85.632	ENSMMOG00000009770	supt5h	97	82.324	Mola_mola
ENSRNOG00000032034	Supt5h	100	92.410	ENSMODG00000013570	SUPT5H	99	85.756	Monodelphis_domestica
ENSRNOG00000032034	Supt5h	100	85.549	ENSMALG00000017833	supt5h	96	83.710	Monopterus_albus
ENSRNOG00000032034	Supt5h	100	100.000	MGP_CAROLIEiJ_G0029441	Supt5	100	96.863	Mus_caroli
ENSRNOG00000032034	Supt5h	100	100.000	ENSMUSG00000003435	Supt5	100	96.771	Mus_musculus
ENSRNOG00000032034	Supt5h	100	99.810	MGP_PahariEiJ_G0012677	Supt5	100	96.587	Mus_pahari
ENSRNOG00000032034	Supt5h	100	100.000	MGP_SPRETEiJ_G0030539	Supt5	100	96.956	Mus_spretus
ENSRNOG00000032034	Supt5h	100	98.837	ENSMPUG00000017721	SUPT5H	100	94.582	Mustela_putorius_furo
ENSRNOG00000032034	Supt5h	100	90.737	ENSMLUG00000008079	-	95	89.854	Myotis_lucifugus
ENSRNOG00000032034	Supt5h	100	98.646	ENSMLUG00000013886	-	100	94.128	Myotis_lucifugus
ENSRNOG00000032034	Supt5h	100	99.419	ENSNGAG00000022458	Supt5	100	95.948	Nannospalax_galili
ENSRNOG00000032034	Supt5h	99	75.665	ENSNBRG00000005030	supt5h	71	76.815	Neolamprologus_brichardi
ENSRNOG00000032034	Supt5h	100	96.219	ENSNLEG00000014365	SUPT5H	96	93.848	Nomascus_leucogenys
ENSRNOG00000032034	Supt5h	100	92.220	ENSMEUG00000016423	SUPT5H	99	86.808	Notamacropus_eugenii
ENSRNOG00000032034	Supt5h	100	92.039	ENSOPRG00000016844	SUPT5H	100	89.218	Ochotona_princeps
ENSRNOG00000032034	Supt5h	100	98.837	ENSODEG00000016445	SUPT5H	100	94.215	Octodon_degus
ENSRNOG00000032034	Supt5h	99	84.512	ENSONIG00000001100	supt5h	94	84.985	Oreochromis_niloticus
ENSRNOG00000032034	Supt5h	100	89.729	ENSOANG00000008175	SUPT5H	100	86.878	Ornithorhynchus_anatinus
ENSRNOG00000032034	Supt5h	100	98.835	ENSOCUG00000002155	SUPT5H	100	94.101	Oryctolagus_cuniculus
ENSRNOG00000032034	Supt5h	99	84.674	ENSORLG00000000394	supt5h	94	83.694	Oryzias_latipes
ENSRNOG00000032034	Supt5h	99	84.674	ENSORLG00020021680	supt5h	94	83.792	Oryzias_latipes_hni
ENSRNOG00000032034	Supt5h	99	84.674	ENSORLG00015010686	supt5h	94	83.792	Oryzias_latipes_hsok
ENSRNOG00000032034	Supt5h	100	99.031	ENSOGAG00000033979	SUPT5H	100	94.399	Otolemur_garnettii
ENSRNOG00000032034	Supt5h	100	98.837	ENSOARG00000006174	SUPT5H	100	93.297	Ovis_aries
ENSRNOG00000032034	Supt5h	100	99.031	ENSPPAG00000040180	SUPT5H	100	94.674	Pan_paniscus
ENSRNOG00000032034	Supt5h	100	98.837	ENSPPRG00000009686	SUPT5H	100	94.582	Panthera_pardus
ENSRNOG00000032034	Supt5h	100	98.837	ENSPTIG00000011633	SUPT5H	100	94.582	Panthera_tigris_altaica
ENSRNOG00000032034	Supt5h	100	99.031	ENSPTRG00000010971	SUPT5H	100	94.674	Pan_troglodytes
ENSRNOG00000032034	Supt5h	100	99.031	ENSPANG00000007383	SUPT5H	100	94.674	Papio_anubis
ENSRNOG00000032034	Supt5h	99	87.165	ENSPKIG00000006261	supt5h	94	85.784	Paramormyrops_kingsleyae
ENSRNOG00000032034	Supt5h	100	96.124	ENSPSIG00000014117	SUPT5H	99	87.751	Pelodiscus_sinensis
ENSRNOG00000032034	Supt5h	91	82.500	ENSPMGG00000020581	supt5h	96	80.899	Periophthalmus_magnuspinnatus
ENSRNOG00000032034	Supt5h	100	99.430	ENSPEMG00000015730	Supt5	100	96.313	Peromyscus_maniculatus_bairdii
ENSRNOG00000032034	Supt5h	100	79.159	ENSPMAG00000006913	supt5h	94	77.313	Petromyzon_marinus
ENSRNOG00000032034	Supt5h	100	96.367	ENSPCIG00000010477	SUPT5H	100	91.042	Phascolarctos_cinereus
ENSRNOG00000032034	Supt5h	97	83.333	ENSPFOG00000011126	supt5h	94	83.827	Poecilia_formosa
ENSRNOG00000032034	Supt5h	99	84.321	ENSPLAG00000013092	supt5h	94	84.396	Poecilia_latipinna
ENSRNOG00000032034	Supt5h	88	90.044	ENSPMEG00000020479	supt5h	92	84.501	Poecilia_mexicana
ENSRNOG00000032034	Supt5h	99	83.301	ENSPREG00000006712	supt5h	94	82.006	Poecilia_reticulata
ENSRNOG00000032034	Supt5h	100	96.219	ENSPPYG00000009968	SUPT5H	100	93.297	Pongo_abelii
ENSRNOG00000032034	Supt5h	100	93.762	ENSPCAG00000010830	SUPT5H	100	77.410	Procavia_capensis
ENSRNOG00000032034	Supt5h	100	98.837	ENSPCOG00000021231	SUPT5H	100	94.674	Propithecus_coquereli
ENSRNOG00000032034	Supt5h	100	89.535	ENSPVAG00000011129	SUPT5H	72	96.739	Pteropus_vampyrus
ENSRNOG00000032034	Supt5h	99	85.057	ENSPNYG00000009203	supt5h	95	82.024	Pundamilia_nyererei
ENSRNOG00000032034	Supt5h	99	77.247	ENSPNAG00000010925	supt5h	98	78.558	Pygocentrus_nattereri
ENSRNOG00000032034	Supt5h	100	96.219	ENSRBIG00000039828	SUPT5H	98	93.333	Rhinopithecus_bieti
ENSRNOG00000032034	Supt5h	100	99.031	ENSRROG00000019625	SUPT5H	100	94.674	Rhinopithecus_roxellana
ENSRNOG00000032034	Supt5h	100	98.837	ENSSBOG00000022657	SUPT5H	100	94.582	Saimiri_boliviensis_boliviensis
ENSRNOG00000032034	Supt5h	100	91.199	ENSSHAG00000009504	SUPT5H	100	90.854	Sarcophilus_harrisii
ENSRNOG00000032034	Supt5h	99	87.356	ENSSFOG00015005973	supt5h	99	83.578	Scleropages_formosus
ENSRNOG00000032034	Supt5h	97	86.706	ENSSMAG00000004503	supt5h	98	81.765	Scophthalmus_maximus
ENSRNOG00000032034	Supt5h	99	86.233	ENSSDUG00000014520	supt5h	99	83.318	Seriola_dumerili
ENSRNOG00000032034	Supt5h	100	86.312	ENSSLDG00000008112	supt5h	99	83.073	Seriola_lalandi_dorsalis
ENSRNOG00000032034	Supt5h	81	97.895	ENSSARG00000000997	-	64	83.768	Sorex_araneus
ENSRNOG00000032034	Supt5h	99	88.359	ENSSPUG00000011434	SUPT5H	95	87.832	Sphenodon_punctatus
ENSRNOG00000032034	Supt5h	99	85.057	ENSSPAG00000010429	supt5h	99	82.749	Stegastes_partitus
ENSRNOG00000032034	Supt5h	99	94.141	ENSSSCG00000023556	SUPT5H	99	90.809	Sus_scrofa
ENSRNOG00000032034	Supt5h	99	85.000	ENSTRUG00000002370	supt5h	100	81.238	Takifugu_rubripes
ENSRNOG00000032034	Supt5h	99	84.483	ENSTNIG00000011178	supt5h	94	83.902	Tetraodon_nigroviridis
ENSRNOG00000032034	Supt5h	95	87.169	ENSTBEG00000017617	SUPT5H	94	80.531	Tupaia_belangeri
ENSRNOG00000032034	Supt5h	100	97.093	ENSTTRG00000003573	SUPT5H	100	93.664	Tursiops_truncatus
ENSRNOG00000032034	Supt5h	100	98.837	ENSUAMG00000020014	SUPT5H	100	94.582	Ursus_americanus
ENSRNOG00000032034	Supt5h	100	96.219	ENSUMAG00000019558	SUPT5H	100	92.096	Ursus_maritimus
ENSRNOG00000032034	Supt5h	100	96.219	ENSVVUG00000006193	SUPT5H	93	94.507	Vulpes_vulpes
ENSRNOG00000032034	Supt5h	100	91.120	ENSXETG00000002888	supt5h	99	85.281	Xenopus_tropicalis
ENSRNOG00000032034	Supt5h	99	83.397	ENSXMAG00000004169	supt5h	94	81.765	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003682	chromatin binding	-	IEA	Function
GO:0003682	chromatin binding	-	ISO	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006357	regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0006368	transcription elongation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0006368	transcription elongation from RNA polymerase II promoter	-	ISO	Process
GO:0016239	positive regulation of macroautophagy	-	IEA	Process
GO:0016239	positive regulation of macroautophagy	-	ISO	Process
GO:0019899	enzyme binding	-	IEA	Function
GO:0019899	enzyme binding	-	ISO	Function
GO:0032044	DSIF complex	21873635.	IBA	Component
GO:0032044	DSIF complex	-	ISO	Component
GO:0032784	regulation of DNA-templated transcription, elongation	-	IEA	Process
GO:0032785	negative regulation of DNA-templated transcription, elongation	-	IEA	Process
GO:0032785	negative regulation of DNA-templated transcription, elongation	-	ISO	Process
GO:0032786	positive regulation of DNA-templated transcription, elongation	-	IEA	Process
GO:0032786	positive regulation of DNA-templated transcription, elongation	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	20097260.	IMP	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0046982	protein heterodimerization activity	-	IEA	Function
GO:0046982	protein heterodimerization activity	-	ISO	Function
GO:1900364	negative regulation of mRNA polyadenylation	-	IEA	Process
GO:1900364	negative regulation of mRNA polyadenylation	-	ISO	Process