EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000032439 (Gene tree)
Gene ID: -
Gene Symbol: Rsl1d1
Alias: Ac1158|Csig
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 33116 bases
Position: chr10:4356915-4390030
Accession: 302898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000042092	Ribosomal_L1	PF00687.21	2.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000044593	-	1623	-	ENSRNOP00000042092	540 (aa)	-	Q7TQ86

Gene Model

Click here to download ENSRNOG00000032439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000032439's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000032439	Rsl1d1	52	84.735	ENSRNOG00000048608	Rsl1d1l1	70	84.735
ENSRNOG00000032439	Rsl1d1	52	84.735	ENSRNOG00000061236	LOC108348298	70	84.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000032439	Rsl1d1	54	65.482	ENSG00000171490	RSL1D1	94	65.217	Homo_sapiens
ENSRNOG00000032439	Rsl1d1	54	67.016	ENSAMEG00000009570	RSL1D1	72	50.000	Ailuropoda_melanoleuca
ENSRNOG00000032439	Rsl1d1	58	45.676	ENSANAG00000028185	-	78	48.071	Aotus_nancymaae
ENSRNOG00000032439	Rsl1d1	58	46.341	ENSANAG00000026520	-	77	47.268	Aotus_nancymaae
ENSRNOG00000032439	Rsl1d1	58	45.995	ENSANAG00000034590	-	78	46.615	Aotus_nancymaae
ENSRNOG00000032439	Rsl1d1	58	47.013	ENSCJAG00000042606	-	80	47.396	Callithrix_jacchus
ENSRNOG00000032439	Rsl1d1	58	46.234	ENSCJAG00000008375	-	80	47.135	Callithrix_jacchus
ENSRNOG00000032439	Rsl1d1	61	45.918	ENSCAFG00000018865	RSL1D1	78	44.898	Canis_familiaris
ENSRNOG00000032439	Rsl1d1	54	37.069	ENSCAFG00020002457	-	71	35.380	Canis_lupus_dingo
ENSRNOG00000032439	Rsl1d1	61	46.997	ENSCAFG00020024488	-	80	47.917	Canis_lupus_dingo
ENSRNOG00000032439	Rsl1d1	55	50.760	ENSCHIG00000009867	-	73	51.420	Capra_hircus
ENSRNOG00000032439	Rsl1d1	62	47.277	ENSTSYG00000009276	RSL1D1	83	47.277	Carlito_syrichta
ENSRNOG00000032439	Rsl1d1	54	67.368	ENSCPOG00000010630	RSL1D1	79	53.369	Cavia_porcellus
ENSRNOG00000032439	Rsl1d1	58	46.978	ENSCCAG00000031641	-	77	46.703	Cebus_capucinus
ENSRNOG00000032439	Rsl1d1	55	46.575	ENSCCAG00000017391	-	73	47.123	Cebus_capucinus
ENSRNOG00000032439	Rsl1d1	58	44.909	ENSCATG00000031153	RSL1D1	78	47.633	Cercocebus_atys
ENSRNOG00000032439	Rsl1d1	50	65.482	ENSCANG00000029202	RSL1D1	81	45.407	Colobus_angolensis_palliatus
ENSRNOG00000032439	Rsl1d1	52	55.516	ENSDORG00000013432	-	69	54.965	Dipodomys_ordii
ENSRNOG00000032439	Rsl1d1	58	47.884	ENSEASG00005011499	RSL1D1	77	46.296	Equus_asinus_asinus
ENSRNOG00000032439	Rsl1d1	58	47.619	ENSECAG00000025036	RSL1D1	77	48.148	Equus_caballus
ENSRNOG00000032439	Rsl1d1	55	50.986	ENSFCAG00000010114	RSL1D1	72	50.986	Felis_catus
ENSRNOG00000032439	Rsl1d1	58	52.661	ENSFDAG00000011414	RSL1D1	80	52.661	Fukomys_damarensis
ENSRNOG00000032439	Rsl1d1	50	65.482	ENSGGOG00000013463	RSL1D1	78	45.974	Gorilla_gorilla
ENSRNOG00000032439	Rsl1d1	58	52.691	ENSHGLG00000006774	RSL1D1	80	52.691	Heterocephalus_glaber_female
ENSRNOG00000032439	Rsl1d1	58	52.691	ENSHGLG00100017781	RSL1D1	80	52.691	Heterocephalus_glaber_male
ENSRNOG00000032439	Rsl1d1	58	48.476	ENSJJAG00000012115	Rsl1d1	81	48.077	Jaculus_jaculus
ENSRNOG00000032439	Rsl1d1	50	65.482	ENSMFAG00000037288	RSL1D1	76	46.524	Macaca_fascicularis
ENSRNOG00000032439	Rsl1d1	50	65.482	ENSMMUG00000019632	RSL1D1	87	65.217	Macaca_mulatta
ENSRNOG00000032439	Rsl1d1	50	64.975	ENSMNEG00000044196	RSL1D1	76	46.257	Macaca_nemestrina
ENSRNOG00000032439	Rsl1d1	50	65.990	ENSMLEG00000042058	RSL1D1	77	46.791	Mandrillus_leucophaeus
ENSRNOG00000032439	Rsl1d1	51	49.849	ENSMICG00000008229	RSL1D1	68	50.755	Microcebus_murinus
ENSRNOG00000032439	Rsl1d1	56	62.678	ENSMOCG00000017724	Rsl1d1	80	62.678	Microtus_ochrogaster
ENSRNOG00000032439	Rsl1d1	52	73.438	ENSMUSG00000005846	Rsl1d1	71	73.438	Mus_musculus
ENSRNOG00000032439	Rsl1d1	52	72.414	MGP_PahariEiJ_G0016164	Rsl1d1	71	71.651	Mus_pahari
ENSRNOG00000032439	Rsl1d1	52	72.500	MGP_SPRETEiJ_G0021352	Rsl1d1	71	72.500	Mus_spretus
ENSRNOG00000032439	Rsl1d1	52	51.462	ENSMLUG00000000784	RSL1D1	51	68.063	Myotis_lucifugus
ENSRNOG00000032439	Rsl1d1	54	57.101	ENSNGAG00000013578	-	77	57.101	Nannospalax_galili
ENSRNOG00000032439	Rsl1d1	52	60.870	ENSNGAG00000009086	-	74	59.118	Nannospalax_galili
ENSRNOG00000032439	Rsl1d1	55	52.439	ENSOPRG00000004442	-	70	52.439	Ochotona_princeps
ENSRNOG00000032439	Rsl1d1	55	50.425	ENSOGAG00000015151	RSL1D1	72	50.286	Otolemur_garnettii
ENSRNOG00000032439	Rsl1d1	54	65.482	ENSPPAG00000039716	RSL1D1	79	44.612	Pan_paniscus
ENSRNOG00000032439	Rsl1d1	51	50.296	ENSPPRG00000005220	RSL1D1	72	50.141	Panthera_pardus
ENSRNOG00000032439	Rsl1d1	55	51.445	ENSPTIG00000005526	RSL1D1	73	52.312	Panthera_tigris_altaica
ENSRNOG00000032439	Rsl1d1	54	64.975	ENSPTRG00000007777	RSL1D1	79	44.361	Pan_troglodytes
ENSRNOG00000032439	Rsl1d1	50	65.482	ENSPANG00000023073	RSL1D1	76	46.257	Papio_anubis
ENSRNOG00000032439	Rsl1d1	59	34.393	ENSPKIG00000022687	rsl1d1	76	36.678	Paramormyrops_kingsleyae
ENSRNOG00000032439	Rsl1d1	52	62.805	ENSPEMG00000009523	Rsl1d1	76	65.294	Peromyscus_maniculatus_bairdii
ENSRNOG00000032439	Rsl1d1	52	42.581	ENSPCIG00000026851	-	73	42.424	Phascolarctos_cinereus
ENSRNOG00000032439	Rsl1d1	54	45.593	ENSPPYG00000019335	-	75	45.994	Pongo_abelii
ENSRNOG00000032439	Rsl1d1	52	51.453	ENSPVAG00000005014	RSL1D1	72	51.453	Pteropus_vampyrus
ENSRNOG00000032439	Rsl1d1	58	45.312	ENSSBOG00000035910	-	78	46.094	Saimiri_boliviensis_boliviensis
ENSRNOG00000032439	Rsl1d1	54	46.111	ENSSBOG00000028384	-	77	46.667	Saimiri_boliviensis_boliviensis
ENSRNOG00000032439	Rsl1d1	52	52.381	ENSSSCG00000023984	RSL1D1	68	50.298	Sus_scrofa
ENSRNOG00000032439	Rsl1d1	55	48.703	ENSTTRG00000011629	RSL1D1	73	47.839	Tursiops_truncatus
ENSRNOG00000032439	Rsl1d1	55	49.713	ENSUAMG00000004470	RSL1D1	80	51.735	Ursus_americanus
ENSRNOG00000032439	Rsl1d1	61	46.684	ENSVVUG00000018170	-	78	46.684	Vulpes_vulpes
ENSRNOG00000032439	Rsl1d1	54	43.909	ENSVVUG00000024962	-	71	45.588	Vulpes_vulpes