EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000032446 (Gene tree)
Gene ID: 300057
Gene Symbol: Recql4
Alias: -
Full Name: RecQ like helicase 4
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 9352 bases
Position: chr7:117763783-117773134
Accession: 1307732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000047177	zf-CCHC	PF00098.23	9.8e-06	1	1
ENSRNOP00000047177	DEAD	PF00270.29	1.7e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000045135	-	6047	XM_006241806	ENSRNOP00000047177	1216 (aa)	XP_006241868	D4A5W5

Gene Model

Click here to download ENSRNOG00000032446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000032446's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000032446	Recql4	99	64.588	ENSG00000160957	RECQL4	99	75.926	Homo_sapiens
ENSRNOG00000032446	Recql4	99	39.763	ENSAPOG00000016945	recql4	99	39.955	Acanthochromis_polyacanthus
ENSRNOG00000032446	Recql4	98	63.339	ENSAMEG00000005460	RECQL4	99	63.339	Ailuropoda_melanoleuca
ENSRNOG00000032446	Recql4	80	52.833	ENSAOCG00000004254	recql4	71	49.054	Amphiprion_ocellaris
ENSRNOG00000032446	Recql4	89	42.925	ENSAPEG00000005709	recql4	88	43.403	Amphiprion_percula
ENSRNOG00000032446	Recql4	76	48.680	ENSATEG00000011464	recql4	95	54.681	Anabas_testudineus
ENSRNOG00000032446	Recql4	99	48.965	ENSACAG00000010589	RECQL4	99	48.732	Anolis_carolinensis
ENSRNOG00000032446	Recql4	100	63.687	ENSANAG00000024497	RECQL4	100	63.687	Aotus_nancymaae
ENSRNOG00000032446	Recql4	81	50.736	ENSACLG00000011982	recql4	71	47.896	Astatotilapia_calliptera
ENSRNOG00000032446	Recql4	61	54.651	ENSAMXG00000004768	recql4	67	54.651	Astyanax_mexicanus
ENSRNOG00000032446	Recql4	100	63.373	ENSCJAG00000021401	RECQL4	99	63.426	Callithrix_jacchus
ENSRNOG00000032446	Recql4	93	61.842	ENSCAFG00000001569	RECQL4	98	61.026	Canis_familiaris
ENSRNOG00000032446	Recql4	100	57.335	ENSCHIG00000011146	RECQL4	99	57.622	Capra_hircus
ENSRNOG00000032446	Recql4	71	70.304	ENSTSYG00000012090	RECQL4	99	70.304	Carlito_syrichta
ENSRNOG00000032446	Recql4	86	66.509	ENSCAPG00000017735	RECQL4	99	66.509	Cavia_aperea
ENSRNOG00000032446	Recql4	99	65.203	ENSCPOG00000015563	RECQL4	99	65.203	Cavia_porcellus
ENSRNOG00000032446	Recql4	100	64.131	ENSCCAG00000035749	RECQL4	100	64.131	Cebus_capucinus
ENSRNOG00000032446	Recql4	99	63.731	ENSCATG00000030745	RECQL4	99	63.731	Cercocebus_atys
ENSRNOG00000032446	Recql4	99	66.345	ENSCLAG00000013847	RECQL4	99	66.345	Chinchilla_lanigera
ENSRNOG00000032446	Recql4	99	64.006	ENSCSAG00000008275	RECQL4	99	64.006	Chlorocebus_sabaeus
ENSRNOG00000032446	Recql4	71	50.917	ENSCPBG00000019003	RECQL4	99	50.917	Chrysemys_picta_bellii
ENSRNOG00000032446	Recql4	94	63.682	ENSCANG00000043305	RECQL4	99	63.682	Colobus_angolensis_palliatus
ENSRNOG00000032446	Recql4	100	78.378	ENSCGRG00001015863	Recql4	100	78.788	Cricetulus_griseus_chok1gshd
ENSRNOG00000032446	Recql4	82	79.840	ENSCGRG00000013535	Recql4	100	79.840	Cricetulus_griseus_crigri
ENSRNOG00000032446	Recql4	67	51.990	ENSCSEG00000014814	recql4	94	51.990	Cynoglossus_semilaevis
ENSRNOG00000032446	Recql4	71	45.165	ENSCVAG00000007993	recql4	93	43.788	Cyprinodon_variegatus
ENSRNOG00000032446	Recql4	95	46.198	ENSDARG00000077516	recql4	81	46.439	Danio_rerio
ENSRNOG00000032446	Recql4	91	67.742	ENSDNOG00000002674	RECQL4	98	68.145	Dasypus_novemcinctus
ENSRNOG00000032446	Recql4	100	62.337	ENSDORG00000002297	Recql4	100	62.255	Dipodomys_ordii
ENSRNOG00000032446	Recql4	84	64.980	ENSETEG00000011107	RECQL4	87	64.980	Echinops_telfairi
ENSRNOG00000032446	Recql4	81	70.349	ENSECAG00000018665	RECQL4	99	68.156	Equus_caballus
ENSRNOG00000032446	Recql4	75	64.888	ENSEEUG00000005223	RECQL4	78	65.136	Erinaceus_europaeus
ENSRNOG00000032446	Recql4	93	47.548	ENSELUG00000022177	recql4	83	47.678	Esox_lucius
ENSRNOG00000032446	Recql4	100	65.331	ENSFDAG00000014917	RECQL4	100	65.331	Fukomys_damarensis
ENSRNOG00000032446	Recql4	83	46.146	ENSFHEG00000009855	recql4	88	42.939	Fundulus_heteroclitus
ENSRNOG00000032446	Recql4	99	41.616	ENSGMOG00000001340	recql4	99	42.105	Gadus_morhua
ENSRNOG00000032446	Recql4	88	49.269	ENSGALG00000042375	-	64	49.478	Gallus_gallus
ENSRNOG00000032446	Recql4	95	48.065	ENSGAFG00000009575	recql4	83	48.065	Gambusia_affinis
ENSRNOG00000032446	Recql4	81	47.871	ENSGACG00000015014	recql4	73	49.582	Gasterosteus_aculeatus
ENSRNOG00000032446	Recql4	88	52.482	ENSGAGG00000021941	RECQL4	80	52.587	Gopherus_agassizii
ENSRNOG00000032446	Recql4	99	64.269	ENSGGOG00000014319	RECQL4	100	69.619	Gorilla_gorilla
ENSRNOG00000032446	Recql4	81	50.900	ENSHBUG00000019085	recql4	71	48.041	Haplochromis_burtoni
ENSRNOG00000032446	Recql4	94	65.128	ENSHGLG00000015925	RECQL4	99	65.372	Heterocephalus_glaber_female
ENSRNOG00000032446	Recql4	91	65.487	ENSHGLG00100007626	RECQL4	99	65.734	Heterocephalus_glaber_male
ENSRNOG00000032446	Recql4	67	50.327	ENSHCOG00000016157	recql4	96	50.327	Hippocampus_comes
ENSRNOG00000032446	Recql4	94	49.037	ENSIPUG00000004473	recql4	91	48.243	Ictalurus_punctatus
ENSRNOG00000032446	Recql4	99	67.678	ENSJJAG00000017588	Recql4	100	67.678	Jaculus_jaculus
ENSRNOG00000032446	Recql4	81	48.550	ENSKMAG00000009537	recql4	99	39.864	Kryptolebias_marmoratus
ENSRNOG00000032446	Recql4	62	55.145	ENSLBEG00000015884	recql4	93	54.881	Labrus_bergylta
ENSRNOG00000032446	Recql4	98	48.466	ENSLACG00000004466	recql4	91	48.061	Latimeria_chalumnae
ENSRNOG00000032446	Recql4	99	46.014	ENSLOCG00000007478	recql4	92	45.924	Lepisosteus_oculatus
ENSRNOG00000032446	Recql4	94	62.618	ENSLAFG00000009512	RECQL4	99	62.618	Loxodonta_africana
ENSRNOG00000032446	Recql4	99	63.898	ENSMFAG00000038185	RECQL4	99	63.898	Macaca_fascicularis
ENSRNOG00000032446	Recql4	99	62.700	ENSMMUG00000015588	RECQL4	99	62.780	Macaca_mulatta
ENSRNOG00000032446	Recql4	99	63.658	ENSMNEG00000036079	RECQL4	99	63.658	Macaca_nemestrina
ENSRNOG00000032446	Recql4	94	64.020	ENSMLEG00000036034	RECQL4	99	69.786	Mandrillus_leucophaeus
ENSRNOG00000032446	Recql4	79	49.688	ENSMAMG00000015565	recql4	66	50.623	Mastacembelus_armatus
ENSRNOG00000032446	Recql4	61	54.654	ENSMZEG00005026699	recql4	95	54.654	Maylandia_zebra
ENSRNOG00000032446	Recql4	100	77.024	ENSMAUG00000008628	Recql4	100	77.433	Mesocricetus_auratus
ENSRNOG00000032446	Recql4	71	69.841	ENSMICG00000015923	RECQL4	100	69.841	Microcebus_murinus
ENSRNOG00000032446	Recql4	100	79.639	ENSMOCG00000009648	Recql4	100	79.639	Microtus_ochrogaster
ENSRNOG00000032446	Recql4	69	50.000	ENSMMOG00000018356	recql4	97	50.240	Mola_mola
ENSRNOG00000032446	Recql4	99	51.095	ENSMODG00000011014	RECQL4	99	51.216	Monodelphis_domestica
ENSRNOG00000032446	Recql4	60	55.168	ENSMALG00000007361	recql4	93	55.168	Monopterus_albus
ENSRNOG00000032446	Recql4	100	87.274	MGP_CAROLIEiJ_G0019945	Recql4	100	87.274	Mus_caroli
ENSRNOG00000032446	Recql4	100	86.946	ENSMUSG00000033762	Recql4	100	86.946	Mus_musculus
ENSRNOG00000032446	Recql4	100	87.993	MGP_PahariEiJ_G0019955	Recql4	100	87.993	Mus_pahari
ENSRNOG00000032446	Recql4	100	87.110	MGP_SPRETEiJ_G0020848	Recql4	100	87.110	Mus_spretus
ENSRNOG00000032446	Recql4	87	62.682	ENSMPUG00000006086	RECQL4	99	62.106	Mustela_putorius_furo
ENSRNOG00000032446	Recql4	100	63.430	ENSMLUG00000011295	RECQL4	100	63.511	Myotis_lucifugus
ENSRNOG00000032446	Recql4	100	74.774	ENSNGAG00000004346	Recql4	100	74.610	Nannospalax_galili
ENSRNOG00000032446	Recql4	96	57.249	ENSNLEG00000010900	RECQL4	99	57.249	Nomascus_leucogenys
ENSRNOG00000032446	Recql4	85	60.497	ENSMEUG00000001818	-	100	60.497	Notamacropus_eugenii
ENSRNOG00000032446	Recql4	82	64.679	ENSOPRG00000002588	RECQL4	84	65.129	Ochotona_princeps
ENSRNOG00000032446	Recql4	99	66.721	ENSODEG00000012082	RECQL4	99	66.721	Octodon_degus
ENSRNOG00000032446	Recql4	84	48.674	ENSONIG00000019801	recql4	85	44.120	Oreochromis_niloticus
ENSRNOG00000032446	Recql4	97	51.741	ENSOANG00000003526	RECQL4	99	51.903	Ornithorhynchus_anatinus
ENSRNOG00000032446	Recql4	81	53.088	ENSORLG00000024764	recql4	71	53.422	Oryzias_latipes
ENSRNOG00000032446	Recql4	65	56.084	ENSOMEG00000023534	recql4	84	56.084	Oryzias_melastigma
ENSRNOG00000032446	Recql4	100	59.295	ENSOGAG00000013008	RECQL4	100	59.295	Otolemur_garnettii
ENSRNOG00000032446	Recql4	88	59.689	ENSOARG00000012917	RECQL4	96	59.689	Ovis_aries
ENSRNOG00000032446	Recql4	99	62.058	ENSPPAG00000038772	RECQL4	99	62.069	Pan_paniscus
ENSRNOG00000032446	Recql4	100	64.612	ENSPTRG00000048119	RECQL4	100	70.090	Pan_troglodytes
ENSRNOG00000032446	Recql4	99	63.900	ENSPANG00000024705	RECQL4	99	63.900	Papio_anubis
ENSRNOG00000032446	Recql4	92	50.296	ENSPKIG00000020206	recql4	81	50.444	Paramormyrops_kingsleyae
ENSRNOG00000032446	Recql4	88	47.390	ENSPMGG00000021408	recql4	99	40.625	Periophthalmus_magnuspinnatus
ENSRNOG00000032446	Recql4	100	79.689	ENSPEMG00000008586	Recql4	100	79.771	Peromyscus_maniculatus_bairdii
ENSRNOG00000032446	Recql4	93	48.065	ENSPFOG00000005814	recql4	74	49.537	Poecilia_formosa
ENSRNOG00000032446	Recql4	93	48.065	ENSPLAG00000011704	recql4	68	54.181	Poecilia_latipinna
ENSRNOG00000032446	Recql4	93	48.065	ENSPMEG00000011683	recql4	68	54.181	Poecilia_mexicana
ENSRNOG00000032446	Recql4	85	50.227	ENSPREG00000012196	recql4	99	42.236	Poecilia_reticulata
ENSRNOG00000032446	Recql4	99	64.503	ENSPPYG00000018984	RECQL4	99	64.503	Pongo_abelii
ENSRNOG00000032446	Recql4	57	71.498	ENSPCAG00000014090	-	66	71.498	Procavia_capensis
ENSRNOG00000032446	Recql4	71	71.429	ENSPCOG00000013744	RECQL4	100	71.429	Propithecus_coquereli
ENSRNOG00000032446	Recql4	100	61.210	ENSPVAG00000006784	RECQL4	100	62.258	Pteropus_vampyrus
ENSRNOG00000032446	Recql4	61	54.654	ENSPNYG00000008927	recql4	95	54.654	Pundamilia_nyererei
ENSRNOG00000032446	Recql4	88	51.961	ENSPNAG00000005987	recql4	88	48.847	Pygocentrus_nattereri
ENSRNOG00000032446	Recql4	94	61.804	ENSRROG00000040848	RECQL4	99	69.741	Rhinopithecus_roxellana
ENSRNOG00000032446	Recql4	94	64.626	ENSSBOG00000021445	RECQL4	100	64.497	Saimiri_boliviensis_boliviensis
ENSRNOG00000032446	Recql4	99	51.494	ENSSHAG00000010333	-	99	51.890	Sarcophilus_harrisii
ENSRNOG00000032446	Recql4	83	54.023	ENSSFOG00015010493	recql4	64	54.023	Scleropages_formosus
ENSRNOG00000032446	Recql4	67	51.098	ENSSMAG00000005002	recql4	94	51.157	Scophthalmus_maximus
ENSRNOG00000032446	Recql4	60	54.987	ENSSDUG00000013245	recql4	94	54.987	Seriola_dumerili
ENSRNOG00000032446	Recql4	60	55.252	ENSSLDG00000016407	recql4	94	55.116	Seriola_lalandi_dorsalis
ENSRNOG00000032446	Recql4	81	60.387	ENSSARG00000013351	-	90	60.035	Sorex_araneus
ENSRNOG00000032446	Recql4	72	49.220	ENSSPUG00000018087	RECQL4	99	48.394	Sphenodon_punctatus
ENSRNOG00000032446	Recql4	60	55.570	ENSSPAG00000006827	recql4	93	55.570	Stegastes_partitus
ENSRNOG00000032446	Recql4	94	64.925	ENSSSCG00000025736	RECQL4	100	65.628	Sus_scrofa
ENSRNOG00000032446	Recql4	77	43.633	ENSTRUG00000012749	recql4	97	43.663	Takifugu_rubripes
ENSRNOG00000032446	Recql4	95	44.454	ENSTNIG00000017539	recql4	74	49.163	Tetraodon_nigroviridis
ENSRNOG00000032446	Recql4	50	76.519	ENSTTRG00000009913	-	51	76.519	Tursiops_truncatus
ENSRNOG00000032446	Recql4	94	60.578	ENSUMAG00000019403	RECQL4	98	60.153	Ursus_maritimus
ENSRNOG00000032446	Recql4	78	48.197	ENSXETG00000016582	recql4	74	48.102	Xenopus_tropicalis
ENSRNOG00000032446	Recql4	61	55.614	ENSXCOG00000019857	recql4	92	55.614	Xiphophorus_couchianus
ENSRNOG00000032446	Recql4	81	45.255	ENSXMAG00000015315	recql4	91	55.839	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000405	bubble DNA binding	21873635.	IBA	Function
GO:0000405	bubble DNA binding	-	ISO	Function
GO:0000723	telomere maintenance	-	ISO	Process
GO:0000724	double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:0000733	DNA strand renaturation	-	IEA	Process
GO:0000733	DNA strand renaturation	-	ISO	Process
GO:0000781	chromosome, telomeric region	21873635.	IBA	Component
GO:0000781	chromosome, telomeric region	-	ISO	Component
GO:0001501	skeletal system development	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0005515	protein binding	21873635.	IBA	Function
GO:0005524	ATP binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005694	chromosome	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006260	DNA replication	21873635.	IBA	Process
GO:0006260	DNA replication	-	ISO	Process
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006284	base-excision repair	21873635.	IBA	Process
GO:0006310	DNA recombination	21873635.	IBA	Process
GO:0008150	biological_process	-	ND	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0008284	positive regulation of cell proliferation	21873635.	IBA	Process
GO:0008284	positive regulation of cell proliferation	-	ISO	Process
GO:0009378	four-way junction helicase activity	21873635.	IBA	Function
GO:0010971	positive regulation of G2/M transition of mitotic cell cycle	21873635.	IBA	Process
GO:0032357	oxidized purine DNA binding	21873635.	IBA	Function
GO:0032357	oxidized purine DNA binding	-	ISO	Function
GO:0032508	DNA duplex unwinding	21873635.	IBA	Process
GO:0032508	DNA duplex unwinding	-	ISO	Process
GO:0036310	annealing helicase activity	21873635.	IBA	Function
GO:0036310	annealing helicase activity	-	ISO	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	21873635.	IBA	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	-	ISO	Function
GO:0043473	pigmentation	-	ISO	Process
GO:0045740	positive regulation of DNA replication	21873635.	IBA	Process
GO:0045875	negative regulation of sister chromatid cohesion	-	ISO	Process
GO:0048705	skeletal system morphogenesis	-	ISO	Process
GO:0061820	telomeric D-loop disassembly	21873635.	IBA	Process
GO:0061820	telomeric D-loop disassembly	-	ISO	Process
GO:0061821	telomeric D-loop binding	21873635.	IBA	Function
GO:0061821	telomeric D-loop binding	-	ISO	Function