EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000032723 (Gene tree)
Gene ID: 308789
Gene Symbol: Efl1
Alias: Eftud1|LOC308789
Full Name: elongation factor like GTPase 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 139326 bases
Position: chr1:144601410-144740735
Accession: 1306521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000049519	GTP_EFTU	PF00009.27	1.6e-61	1	1
ENSRNOP00000049519	GTP_EFTU_D2	PF03144.25	1.7e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000047408	-	3737	-	ENSRNOP00000049519	1127 (aa)	-	D3ZXJ5

Gene Model

Click here to download ENSRNOG00000032723's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000032723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000032723	Efl1	88	38.889	ENSRNOG00000020266	Eef2	97	38.889
ENSRNOG00000032723	Efl1	69	33.803	ENSRNOG00000002818	Eftud2	73	33.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000032723	Efl1	100	89.894	ENSG00000140598	EFL1	100	93.333	Homo_sapiens
ENSRNOG00000032723	Efl1	99	68.130	ENSAPOG00000000188	efl1	99	68.130	Acanthochromis_polyacanthus
ENSRNOG00000032723	Efl1	100	89.450	ENSAMEG00000006031	EFL1	100	89.450	Ailuropoda_melanoleuca
ENSRNOG00000032723	Efl1	99	68.551	ENSACIG00000017802	efl1	99	68.905	Amphilophus_citrinellus
ENSRNOG00000032723	Efl1	99	68.286	ENSAOCG00000023933	efl1	99	68.463	Amphiprion_ocellaris
ENSRNOG00000032723	Efl1	99	69.129	ENSAPEG00000000262	efl1	99	69.129	Amphiprion_percula
ENSRNOG00000032723	Efl1	99	68.667	ENSATEG00000012373	efl1	99	68.634	Anabas_testudineus
ENSRNOG00000032723	Efl1	99	75.798	ENSAPLG00000011147	EFL1	99	75.798	Anas_platyrhynchos
ENSRNOG00000032723	Efl1	100	72.695	ENSACAG00000011040	EFL1	100	72.695	Anolis_carolinensis
ENSRNOG00000032723	Efl1	100	90.160	ENSANAG00000027459	EFL1	100	90.160	Aotus_nancymaae
ENSRNOG00000032723	Efl1	99	67.788	ENSACLG00000025780	efl1	100	67.696	Astatotilapia_calliptera
ENSRNOG00000032723	Efl1	100	69.311	ENSAMXG00000019529	efl1	100	69.311	Astyanax_mexicanus
ENSRNOG00000032723	Efl1	100	89.017	ENSBTAG00000003410	EFL1	100	89.017	Bos_taurus
ENSRNOG00000032723	Efl1	92	37.349	WBGene00010732	K10C3.5	92	58.559	Caenorhabditis_elegans
ENSRNOG00000032723	Efl1	84	99.206	ENSCJAG00000015607	-	93	99.206	Callithrix_jacchus
ENSRNOG00000032723	Efl1	100	89.184	ENSCAFG00000013671	EFL1	100	89.184	Canis_familiaris
ENSRNOG00000032723	Efl1	100	88.928	ENSCHIG00000001883	EFL1	100	88.928	Capra_hircus
ENSRNOG00000032723	Efl1	100	89.894	ENSTSYG00000000348	EFL1	100	89.894	Carlito_syrichta
ENSRNOG00000032723	Efl1	100	75.507	ENSCAPG00000017944	EFL1	100	75.507	Cavia_aperea
ENSRNOG00000032723	Efl1	100	88.475	ENSCPOG00000001924	EFL1	100	88.475	Cavia_porcellus
ENSRNOG00000032723	Efl1	100	90.071	ENSCCAG00000034450	EFL1	100	90.071	Cebus_capucinus
ENSRNOG00000032723	Efl1	100	89.362	ENSCATG00000031678	-	100	89.362	Cercocebus_atys
ENSRNOG00000032723	Efl1	100	88.121	ENSCLAG00000010155	EFL1	100	88.121	Chinchilla_lanigera
ENSRNOG00000032723	Efl1	100	89.450	ENSCSAG00000015165	EFL1	100	89.450	Chlorocebus_sabaeus
ENSRNOG00000032723	Efl1	72	86.372	ENSCHOG00000014029	EFL1	78	86.372	Choloepus_hoffmanni
ENSRNOG00000032723	Efl1	99	76.228	ENSCPBG00000017638	EFL1	99	76.228	Chrysemys_picta_bellii
ENSRNOG00000032723	Efl1	100	55.877	ENSCSAVG00000001787	-	99	61.697	Ciona_savignyi
ENSRNOG00000032723	Efl1	100	89.628	ENSCANG00000038093	EFL1	100	89.628	Colobus_angolensis_palliatus
ENSRNOG00000032723	Efl1	100	91.393	ENSCGRG00001010826	Efl1	100	91.393	Cricetulus_griseus_chok1gshd
ENSRNOG00000032723	Efl1	100	95.031	ENSCGRG00000003273	Efl1	100	95.031	Cricetulus_griseus_crigri
ENSRNOG00000032723	Efl1	99	64.789	ENSCSEG00000005856	efl1	99	64.877	Cynoglossus_semilaevis
ENSRNOG00000032723	Efl1	93	65.628	ENSCVAG00000011863	efl1	95	65.817	Cyprinodon_variegatus
ENSRNOG00000032723	Efl1	99	69.654	ENSDARG00000079672	efl1	98	69.654	Danio_rerio
ENSRNOG00000032723	Efl1	100	89.273	ENSDNOG00000006097	EFL1	100	89.273	Dasypus_novemcinctus
ENSRNOG00000032723	Efl1	100	87.157	ENSDORG00000000719	Efl1	100	87.157	Dipodomys_ordii
ENSRNOG00000032723	Efl1	99	44.882	FBgn0053158	CG33158	99	44.939	Drosophila_melanogaster
ENSRNOG00000032723	Efl1	93	78.797	ENSETEG00000004309	EFL1	100	78.797	Echinops_telfairi
ENSRNOG00000032723	Efl1	83	66.587	ENSEBUG00000010738	efl1	99	66.587	Eptatretus_burgeri
ENSRNOG00000032723	Efl1	100	87.234	ENSEASG00005007108	EFL1	100	87.234	Equus_asinus_asinus
ENSRNOG00000032723	Efl1	95	87.070	ENSECAG00000016354	EFL1	99	87.070	Equus_caballus
ENSRNOG00000032723	Efl1	69	86.167	ENSEEUG00000006326	EFL1	79	86.167	Erinaceus_europaeus
ENSRNOG00000032723	Efl1	99	64.961	ENSELUG00000002520	efl1	96	77.193	Esox_lucius
ENSRNOG00000032723	Efl1	100	87.500	ENSFCAG00000007741	EFL1	100	87.500	Felis_catus
ENSRNOG00000032723	Efl1	100	76.383	ENSFALG00000011103	EFL1	100	76.383	Ficedula_albicollis
ENSRNOG00000032723	Efl1	100	87.943	ENSFDAG00000009023	EFL1	100	87.943	Fukomys_damarensis
ENSRNOG00000032723	Efl1	100	67.048	ENSFHEG00000017795	efl1	100	67.048	Fundulus_heteroclitus
ENSRNOG00000032723	Efl1	99	63.805	ENSGMOG00000005041	efl1	100	63.805	Gadus_morhua
ENSRNOG00000032723	Efl1	100	76.532	ENSGALG00000006225	EFL1	100	76.532	Gallus_gallus
ENSRNOG00000032723	Efl1	99	66.461	ENSGACG00000012495	efl1	99	66.461	Gasterosteus_aculeatus
ENSRNOG00000032723	Efl1	100	76.532	ENSGAGG00000022841	EFL1	100	76.532	Gopherus_agassizii
ENSRNOG00000032723	Efl1	97	83.956	ENSGGOG00000005017	EFL1	100	83.956	Gorilla_gorilla
ENSRNOG00000032723	Efl1	99	67.580	ENSHBUG00000022667	efl1	100	67.753	Haplochromis_burtoni
ENSRNOG00000032723	Efl1	100	85.195	ENSHGLG00000011798	EFL1	100	85.195	Heterocephalus_glaber_female
ENSRNOG00000032723	Efl1	100	88.652	ENSHGLG00100010319	EFTUD1	99	92.683	Heterocephalus_glaber_male
ENSRNOG00000032723	Efl1	99	67.401	ENSHCOG00000007325	efl1	99	67.401	Hippocampus_comes
ENSRNOG00000032723	Efl1	99	67.958	ENSIPUG00000023360	EFTUD1	99	67.958	Ictalurus_punctatus
ENSRNOG00000032723	Efl1	100	87.855	ENSSTOG00000022945	EFL1	100	87.855	Ictidomys_tridecemlineatus
ENSRNOG00000032723	Efl1	100	90.957	ENSJJAG00000018598	Efl1	100	90.957	Jaculus_jaculus
ENSRNOG00000032723	Efl1	99	67.226	ENSLBEG00000015269	efl1	99	67.226	Labrus_bergylta
ENSRNOG00000032723	Efl1	100	71.429	ENSLACG00000016121	EFL1	100	71.429	Latimeria_chalumnae
ENSRNOG00000032723	Efl1	99	70.132	ENSLOCG00000012862	efl1	99	70.000	Lepisosteus_oculatus
ENSRNOG00000032723	Efl1	100	86.791	ENSLAFG00000012504	EFL1	100	86.791	Loxodonta_africana
ENSRNOG00000032723	Efl1	100	89.273	ENSMFAG00000032657	-	100	89.273	Macaca_fascicularis
ENSRNOG00000032723	Efl1	100	86.575	ENSMMUG00000023353	EFL1	100	86.575	Macaca_mulatta
ENSRNOG00000032723	Efl1	100	89.450	ENSMNEG00000041671	-	99	89.450	Macaca_nemestrina
ENSRNOG00000032723	Efl1	100	89.450	ENSMLEG00000033735	EFL1	100	89.450	Mandrillus_leucophaeus
ENSRNOG00000032723	Efl1	99	68.402	ENSMAMG00000011336	efl1	99	68.402	Mastacembelus_armatus
ENSRNOG00000032723	Efl1	99	67.816	ENSMZEG00005003012	efl1	100	67.813	Maylandia_zebra
ENSRNOG00000032723	Efl1	100	76.889	ENSMGAG00000007991	EFL1	100	76.889	Meleagris_gallopavo
ENSRNOG00000032723	Efl1	100	94.232	ENSMAUG00000010709	Efl1	100	94.232	Mesocricetus_auratus
ENSRNOG00000032723	Efl1	100	89.982	ENSMICG00000027853	EFL1	100	89.982	Microcebus_murinus
ENSRNOG00000032723	Efl1	100	94.144	ENSMOCG00000007470	Efl1	100	94.144	Microtus_ochrogaster
ENSRNOG00000032723	Efl1	100	62.179	ENSMMOG00000015370	efl1	100	62.445	Mola_mola
ENSRNOG00000032723	Efl1	100	81.007	ENSMODG00000019386	EFL1	100	81.007	Monodelphis_domestica
ENSRNOG00000032723	Efl1	100	67.770	ENSMALG00000018810	efl1	100	67.770	Monopterus_albus
ENSRNOG00000032723	Efl1	100	96.717	MGP_CAROLIEiJ_G0029936	Efl1	100	96.721	Mus_caroli
ENSRNOG00000032723	Efl1	100	96.983	ENSMUSG00000038563	Efl1	100	97.009	Mus_musculus
ENSRNOG00000032723	Efl1	100	96.096	MGP_PahariEiJ_G0013157	Efl1	100	96.154	Mus_pahari
ENSRNOG00000032723	Efl1	100	97.462	MGP_SPRETEiJ_G0031038	Efl1	99	97.462	Mus_spretus
ENSRNOG00000032723	Efl1	100	86.613	ENSMPUG00000015494	EFL1	100	86.613	Mustela_putorius_furo
ENSRNOG00000032723	Efl1	100	92.458	ENSNGAG00000017740	Efl1	100	92.458	Nannospalax_galili
ENSRNOG00000032723	Efl1	93	89.101	ENSNLEG00000010679	EFL1	100	89.101	Nomascus_leucogenys
ENSRNOG00000032723	Efl1	63	90.566	ENSMEUG00000012049	-	70	90.566	Notamacropus_eugenii
ENSRNOG00000032723	Efl1	63	92.683	ENSOPRG00000012488	-	63	92.683	Ochotona_princeps
ENSRNOG00000032723	Efl1	100	87.666	ENSODEG00000016193	EFL1	100	87.666	Octodon_degus
ENSRNOG00000032723	Efl1	99	67.926	ENSONIG00000003394	efl1	100	67.835	Oreochromis_niloticus
ENSRNOG00000032723	Efl1	100	88.387	ENSOCUG00000012163	EFL1	100	88.387	Oryctolagus_cuniculus
ENSRNOG00000032723	Efl1	63	62.275	ENSORLG00000020390	efl1	100	62.865	Oryzias_latipes
ENSRNOG00000032723	Efl1	95	70.563	ENSORLG00015012031	efl1	99	66.755	Oryzias_latipes_hsok
ENSRNOG00000032723	Efl1	99	66.490	ENSOMEG00000022784	efl1	99	66.490	Oryzias_melastigma
ENSRNOG00000032723	Efl1	100	89.204	ENSOARG00000014452	EFL1	100	89.204	Ovis_aries
ENSRNOG00000032723	Efl1	100	84.043	ENSPPAG00000039672	EFL1	100	84.043	Pan_paniscus
ENSRNOG00000032723	Efl1	100	87.323	ENSPPRG00000002193	EFL1	100	87.323	Panthera_pardus
ENSRNOG00000032723	Efl1	100	87.145	ENSPTIG00000007053	EFL1	100	87.145	Panthera_tigris_altaica
ENSRNOG00000032723	Efl1	100	89.805	ENSPTRG00000007374	EFL1	100	89.805	Pan_troglodytes
ENSRNOG00000032723	Efl1	100	89.450	ENSPANG00000015635	-	98	89.450	Papio_anubis
ENSRNOG00000032723	Efl1	99	72.180	ENSPKIG00000018456	efl1	99	68.388	Paramormyrops_kingsleyae
ENSRNOG00000032723	Efl1	100	76.553	ENSPSIG00000007790	EFL1	100	76.553	Pelodiscus_sinensis
ENSRNOG00000032723	Efl1	93	61.168	ENSPMAG00000002026	efl1	99	61.168	Petromyzon_marinus
ENSRNOG00000032723	Efl1	100	81.256	ENSPCIG00000004372	EFL1	100	81.256	Phascolarctos_cinereus
ENSRNOG00000032723	Efl1	100	67.250	ENSPFOG00000018687	efl1	100	67.338	Poecilia_formosa
ENSRNOG00000032723	Efl1	100	67.338	ENSPLAG00000001988	efl1	100	67.426	Poecilia_latipinna
ENSRNOG00000032723	Efl1	100	67.401	ENSPMEG00000000402	efl1	100	67.489	Poecilia_mexicana
ENSRNOG00000032723	Efl1	100	68.134	ENSPREG00000022085	efl1	100	68.222	Poecilia_reticulata
ENSRNOG00000032723	Efl1	100	89.805	ENSPPYG00000006724	EFL1	100	89.805	Pongo_abelii
ENSRNOG00000032723	Efl1	100	87.766	ENSPVAG00000003189	EFL1	100	87.766	Pteropus_vampyrus
ENSRNOG00000032723	Efl1	99	62.655	ENSPNYG00000019406	efl1	100	62.930	Pundamilia_nyererei
ENSRNOG00000032723	Efl1	99	69.622	ENSPNAG00000012104	efl1	99	69.622	Pygocentrus_nattereri
ENSRNOG00000032723	Efl1	100	89.539	ENSRBIG00000040576	EFL1	100	89.539	Rhinopithecus_bieti
ENSRNOG00000032723	Efl1	100	86.170	ENSRROG00000031475	EFL1	100	85.993	Rhinopithecus_roxellana
ENSRNOG00000032723	Efl1	95	46.581	YNL163C	RIA1	86	46.993	Saccharomyces_cerevisiae
ENSRNOG00000032723	Efl1	100	89.805	ENSSBOG00000018280	EFL1	100	89.805	Saimiri_boliviensis_boliviensis
ENSRNOG00000032723	Efl1	100	77.221	ENSSHAG00000018863	EFL1	100	77.221	Sarcophilus_harrisii
ENSRNOG00000032723	Efl1	100	69.948	ENSSFOG00015016244	efl1	100	69.948	Scleropages_formosus
ENSRNOG00000032723	Efl1	99	67.282	ENSSMAG00000016928	efl1	99	67.518	Scophthalmus_maximus
ENSRNOG00000032723	Efl1	99	68.342	ENSSDUG00000013271	efl1	99	68.342	Seriola_dumerili
ENSRNOG00000032723	Efl1	99	68.486	ENSSLDG00000014655	efl1	99	68.486	Seriola_lalandi_dorsalis
ENSRNOG00000032723	Efl1	100	75.087	ENSSPUG00000000941	EFL1	100	75.087	Sphenodon_punctatus
ENSRNOG00000032723	Efl1	99	68.018	ENSSPAG00000011885	efl1	99	68.018	Stegastes_partitus
ENSRNOG00000032723	Efl1	100	89.450	ENSSSCG00000001792	EFL1	100	89.450	Sus_scrofa
ENSRNOG00000032723	Efl1	100	77.454	ENSTGUG00000007850	EFL1	100	77.454	Taeniopygia_guttata
ENSRNOG00000032723	Efl1	100	60.210	ENSTNIG00000003399	efl1	100	60.210	Tetraodon_nigroviridis
ENSRNOG00000032723	Efl1	73	93.210	ENSTBEG00000011804	EFL1	79	93.210	Tupaia_belangeri
ENSRNOG00000032723	Efl1	100	87.688	ENSTTRG00000011243	EFL1	100	87.688	Tursiops_truncatus
ENSRNOG00000032723	Efl1	100	89.184	ENSUAMG00000022106	EFL1	100	89.184	Ursus_americanus
ENSRNOG00000032723	Efl1	100	89.362	ENSUMAG00000010303	EFL1	100	89.362	Ursus_maritimus
ENSRNOG00000032723	Efl1	94	93.852	ENSVPAG00000005735	EFL1	94	93.852	Vicugna_pacos
ENSRNOG00000032723	Efl1	100	89.273	ENSVVUG00000004967	EFL1	100	89.273	Vulpes_vulpes
ENSRNOG00000032723	Efl1	100	72.687	ENSXETG00000015701	EFL1	100	72.687	Xenopus_tropicalis
ENSRNOG00000032723	Efl1	100	67.606	ENSXMAG00000023705	efl1	100	67.694	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	ISO	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005829	cytosol	21873635.	IBA	Component
GO:0042256	mature ribosome assembly	21873635.	IBA	Process
GO:0042256	mature ribosome assembly	-	ISO	Process
GO:0043022	ribosome binding	21873635.	IBA	Function
GO:0043022	ribosome binding	-	ISO	Function
GO:0046039	GTP metabolic process	-	IEA	Process
GO:0046039	GTP metabolic process	-	ISO	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component