EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000032739 (Gene tree)
Gene ID: 302729
Gene Symbol: Da2-19
Alias: -
Full Name: uncharacterized LOC302729
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 16590 bases
Position: chrX:48196916-48213505
Accession: 11081208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000051059	efThoc1	PF11957.8	2.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000045976	-	1032	-	ENSRNOP00000051059	343 (aa)	-	P59924

Gene Model

Click here to download ENSRNOG00000032739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000032739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000032739	Da2-19	83	74.394	ENSRNOG00000015332	Thoc1	56	74.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000032739	Da2-19	76	82.625	ENSG00000079134	THOC1	50	79.412	Homo_sapiens
ENSRNOG00000032739	Da2-19	76	82.625	ENSCAFG00000018324	THOC1	56	69.896	Canis_familiaris
ENSRNOG00000032739	Da2-19	76	87.645	ENSMUSG00000024287	Thoc1	72	74.394	Mus_musculus
ENSRNOG00000032739	Da2-19	73	56.471	ENSOMEG00000008200	thoc1	57	47.887	Oryzias_melastigma
ENSRNOG00000032739	Da2-19	76	81.538	ENSPCIG00000026942	THOC1	51	83.929	Phascolarctos_cinereus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000018	regulation of DNA recombination	-	ISS	Process
GO:0003677	DNA binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0006406	mRNA export from nucleus	-	ISS	Process
GO:0006915	apoptotic process	-	IEA	Process
GO:0007165	signal transduction	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016363	nuclear matrix	-	IEA	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0031297	replication fork processing	-	ISS	Process
GO:0032786	positive regulation of DNA-templated transcription, elongation	-	ISS	Process
GO:0048297	negative regulation of isotype switching to IgA isotypes	-	ISS	Process
GO:2000002	negative regulation of DNA damage checkpoint	-	ISS	Process