EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000033169 (Gene tree)
Gene ID
303010
Gene Symbol
Cpeb4
Alias
LOC303010|LOC685957
Full Name
cytoplasmic polyadenylation element binding protein 4
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
58113 bases
Position
chr10:15987921-16046033
Accession
1311931
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000060861RRM_1PF00076.223.5e-1211
ENSRNOP00000072827RRM_1PF00076.223.6e-1211
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000064832-2830XM_006245980ENSRNOP00000060861721 (aa)XP_006246042D3ZKL3
ENSRNOT00000089460-2587XM_006245978ENSRNOP00000072827729 (aa)XP_006246040A0A0G2K3Y6
Gene Model
Click here to download ENSRNOG00000033169's gene model file
Pathways
Pathway IDPathway NameSource
rno04114Oocyte meiosisKEGG
rno04914Progesterone-mediated oocyte maturationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000033169's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000033169Cpeb48363.101ENSRNOG00000020689Cpeb39159.379
ENSRNOG00000033169Cpeb46669.732ENSRNOG00000005043Cpeb26474.891
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000033169Cpeb410098.903ENSG00000113742CPEB410099.410Homo_sapiens
ENSRNOG00000033169Cpeb410069.323ENSAPOG00000006896cpeb4a10088.563Acanthochromis_polyacanthus
ENSRNOG00000033169Cpeb410074.967ENSAPOG00000012405CPEB410076.995Acanthochromis_polyacanthus
ENSRNOG00000033169Cpeb410098.903ENSAMEG00000011342CPEB410098.903Ailuropoda_melanoleuca
ENSRNOG00000033169Cpeb410067.651ENSACIG00000016815cpeb4a10067.828Amphilophus_citrinellus
ENSRNOG00000033169Cpeb410074.400ENSACIG00000000739CPEB410076.964Amphilophus_citrinellus
ENSRNOG00000033169Cpeb410069.456ENSAOCG00000015830cpeb4a10088.563Amphiprion_ocellaris
ENSRNOG00000033169Cpeb410074.967ENSAOCG00000000533CPEB410076.995Amphiprion_ocellaris
ENSRNOG00000033169Cpeb410074.967ENSAPEG00000017337CPEB410076.995Amphiprion_percula
ENSRNOG00000033169Cpeb410069.363ENSAPEG00000011894cpeb4a10088.563Amphiprion_percula
ENSRNOG00000033169Cpeb410069.396ENSATEG00000001785cpeb4a10069.303Anabas_testudineus
ENSRNOG00000033169Cpeb410074.800ENSATEG00000010123CPEB410077.630Anabas_testudineus
ENSRNOG00000033169Cpeb410092.105ENSACAG00000015039CPEB410092.659Anolis_carolinensis
ENSRNOG00000033169Cpeb410098.903ENSANAG00000038371CPEB410098.903Aotus_nancymaae
ENSRNOG00000033169Cpeb410068.859ENSACLG00000001821cpeb4a10068.231Astatotilapia_calliptera
ENSRNOG00000033169Cpeb410074.633ENSACLG00000009630CPEB410075.502Astatotilapia_calliptera
ENSRNOG00000033169Cpeb48879.251ENSAMXG00000013453-10087.750Astyanax_mexicanus
ENSRNOG00000033169Cpeb410073.565ENSAMXG00000030295cpeb4a10074.499Astyanax_mexicanus
ENSRNOG00000033169Cpeb410099.040ENSBTAG00000009995CPEB410099.040Bos_taurus
ENSRNOG00000033169Cpeb410098.628ENSCJAG00000019166CPEB410098.628Callithrix_jacchus
ENSRNOG00000033169Cpeb410099.029ENSCAFG00000016761CPEB410099.029Canis_familiaris
ENSRNOG00000033169Cpeb410098.080ENSCAFG00020011285CPEB410098.080Canis_lupus_dingo
ENSRNOG00000033169Cpeb410099.040ENSCHIG00000011030CPEB410099.040Capra_hircus
ENSRNOG00000033169Cpeb410098.765ENSTSYG00000003136CPEB410098.765Carlito_syrichta
ENSRNOG00000033169Cpeb49096.136ENSCPOG00000015530CPEB499100.000Cavia_porcellus
ENSRNOG00000033169Cpeb410098.903ENSCCAG00000037039CPEB410098.903Cebus_capucinus
ENSRNOG00000033169Cpeb410098.903ENSCATG00000014550CPEB410098.903Cercocebus_atys
ENSRNOG00000033169Cpeb410098.765ENSCLAG00000013156CPEB410098.765Chinchilla_lanigera
ENSRNOG00000033169Cpeb410098.903ENSCSAG00000009516CPEB410098.903Chlorocebus_sabaeus
ENSRNOG00000033169Cpeb410094.036ENSCPBG00000007535CPEB410094.036Chrysemys_picta_bellii
ENSRNOG00000033169Cpeb410098.903ENSCANG00000037672CPEB410098.903Colobus_angolensis_palliatus
ENSRNOG00000033169Cpeb410099.726ENSCGRG00001021805Cpeb410099.726Cricetulus_griseus_chok1gshd
ENSRNOG00000033169Cpeb410099.726ENSCGRG00000014167Cpeb410099.726Cricetulus_griseus_crigri
ENSRNOG00000033169Cpeb410069.652ENSCSEG00000020154cpeb4a10069.251Cynoglossus_semilaevis
ENSRNOG00000033169Cpeb410074.934ENSCSEG00000014712CPEB410076.400Cynoglossus_semilaevis
ENSRNOG00000033169Cpeb410074.177ENSCVAG00000015292-10076.064Cyprinodon_variegatus
ENSRNOG00000033169Cpeb410074.114ENSDARG00000056691cpeb4a10073.906Danio_rerio
ENSRNOG00000033169Cpeb45471.852ENSEBUG00000008330-9579.885Eptatretus_burgeri
ENSRNOG00000033169Cpeb410098.354ENSEASG00005011952CPEB410098.354Equus_asinus_asinus
ENSRNOG00000033169Cpeb410098.354ENSECAG00000016921CPEB410098.354Equus_caballus
ENSRNOG00000033169Cpeb49197.594ENSEEUG00000010887CPEB410097.594Erinaceus_europaeus
ENSRNOG00000033169Cpeb49870.133ENSELUG00000005282cpeb4a9987.616Esox_lucius
ENSRNOG00000033169Cpeb410080.654ENSELUG00000022898CPEB410080.654Esox_lucius
ENSRNOG00000033169Cpeb410099.040ENSFCAG00000031504CPEB410099.040Felis_catus
ENSRNOG00000033169Cpeb410092.510ENSFALG00000008809CPEB410092.372Ficedula_albicollis
ENSRNOG00000033169Cpeb410098.903ENSFDAG00000011935CPEB4100100.000Fukomys_damarensis
ENSRNOG00000033169Cpeb49071.366ENSFHEG00000010699CPEB49873.585Fundulus_heteroclitus
ENSRNOG00000033169Cpeb410069.426ENSFHEG00000007532cpeb4a10068.892Fundulus_heteroclitus
ENSRNOG00000033169Cpeb410068.667ENSGMOG00000015333cpeb4a10068.800Gadus_morhua
ENSRNOG00000033169Cpeb410092.926ENSGALG00000033512CPEB410092.788Gallus_gallus
ENSRNOG00000033169Cpeb410074.301ENSGAFG00000004796CPEB410076.197Gambusia_affinis
ENSRNOG00000033169Cpeb410070.040ENSGAFG00000006705cpeb4a10069.374Gambusia_affinis
ENSRNOG00000033169Cpeb410067.952ENSGACG00000018422cpeb4a10083.333Gasterosteus_aculeatus
ENSRNOG00000033169Cpeb410093.897ENSGAGG00000019992CPEB410093.897Gopherus_agassizii
ENSRNOG00000033169Cpeb410098.903ENSGGOG00000010097CPEB410098.903Gorilla_gorilla
ENSRNOG00000033169Cpeb410074.637ENSHBUG00000003334CPEB410075.502Haplochromis_burtoni
ENSRNOG00000033169Cpeb410069.035ENSHBUG00000004215cpeb4a10068.407Haplochromis_burtoni
ENSRNOG00000033169Cpeb410099.040ENSHGLG00000008897CPEB410099.040Heterocephalus_glaber_female
ENSRNOG00000033169Cpeb410097.368ENSHGLG00100017994CPEB410097.368Heterocephalus_glaber_male
ENSRNOG00000033169Cpeb410067.517ENSHCOG00000003707cpeb4a10087.977Hippocampus_comes
ENSRNOG00000033169Cpeb410074.373ENSHCOG00000003846CPEB410075.701Hippocampus_comes
ENSRNOG00000033169Cpeb410075.951ENSIPUG00000005518cpeb410075.815Ictalurus_punctatus
ENSRNOG00000033169Cpeb410074.054ENSIPUG00000010268cpeb4a10075.000Ictalurus_punctatus
ENSRNOG00000033169Cpeb410098.765ENSSTOG00000020645CPEB410098.765Ictidomys_tridecemlineatus
ENSRNOG00000033169Cpeb410097.257ENSJJAG00000021518Cpeb410098.980Jaculus_jaculus
ENSRNOG00000033169Cpeb410069.200ENSKMAG00000008902cpeb4a10068.449Kryptolebias_marmoratus
ENSRNOG00000033169Cpeb410073.747ENSKMAG00000009453CPEB410076.021Kryptolebias_marmoratus
ENSRNOG00000033169Cpeb410070.331ENSLBEG00000022823cpeb4a10088.563Labrus_bergylta
ENSRNOG00000033169Cpeb410076.222ENSLBEG00000001697CPEB410077.036Labrus_bergylta
ENSRNOG00000033169Cpeb410087.193ENSLACG00000016073CPEB410088.828Latimeria_chalumnae
ENSRNOG00000033169Cpeb410083.832ENSLOCG00000009131cpeb4a10084.668Lepisosteus_oculatus
ENSRNOG00000033169Cpeb410098.903ENSLAFG00000016030CPEB410098.903Loxodonta_africana
ENSRNOG00000033169Cpeb410098.903ENSMFAG00000003075CPEB410098.903Macaca_fascicularis
ENSRNOG00000033169Cpeb410098.903ENSMMUG00000019926CPEB410098.903Macaca_mulatta
ENSRNOG00000033169Cpeb410098.903ENSMNEG00000034689CPEB410098.903Macaca_nemestrina
ENSRNOG00000033169Cpeb410098.903ENSMLEG00000029667CPEB410098.903Mandrillus_leucophaeus
ENSRNOG00000033169Cpeb410068.993ENSMAMG00000012163cpeb4a10068.591Mastacembelus_armatus
ENSRNOG00000033169Cpeb410075.499ENSMAMG00000021359CPEB410077.230Mastacembelus_armatus
ENSRNOG00000033169Cpeb410074.637ENSMZEG00005002361CPEB410076.933Maylandia_zebra
ENSRNOG00000033169Cpeb410069.035ENSMZEG00005008957cpeb4a10087.977Maylandia_zebra
ENSRNOG00000033169Cpeb410093.579ENSMGAG00000003660CPEB410092.486Meleagris_gallopavo
ENSRNOG00000033169Cpeb410099.588ENSMAUG00000011128Cpeb410099.745Mesocricetus_auratus
ENSRNOG00000033169Cpeb410098.903ENSMICG00000029322CPEB410098.903Microcebus_murinus
ENSRNOG00000033169Cpeb410099.040ENSMOCG00000022941Cpeb410099.745Microtus_ochrogaster
ENSRNOG00000033169Cpeb410068.733ENSMMOG00000009234cpeb4a10068.371Mola_mola
ENSRNOG00000033169Cpeb49571.669ENSMMOG00000013833CPEB49773.913Mola_mola
ENSRNOG00000033169Cpeb410097.264ENSMODG00000006036CPEB410097.264Monodelphis_domestica
ENSRNOG00000033169Cpeb410075.233ENSMALG00000018742CPEB410076.463Monopterus_albus
ENSRNOG00000033169Cpeb410068.506ENSMALG00000004737cpeb4a10067.833Monopterus_albus
ENSRNOG00000033169Cpeb410099.451MGP_CAROLIEiJ_G0016172Cpeb410099.745Mus_caroli
ENSRNOG00000033169Cpeb410099.451ENSMUSG00000020300Cpeb410099.745Mus_musculus
ENSRNOG00000033169Cpeb410099.588MGP_PahariEiJ_G0017307Cpeb4100100.000Mus_pahari
ENSRNOG00000033169Cpeb410099.451MGP_SPRETEiJ_G0017016Cpeb410099.745Mus_spretus
ENSRNOG00000033169Cpeb410099.040ENSMPUG00000012687CPEB410099.040Mustela_putorius_furo
ENSRNOG00000033169Cpeb410099.451ENSNGAG00000010735Cpeb4100100.000Nannospalax_galili
ENSRNOG00000033169Cpeb410075.033ENSNBRG00000005452CPEB410076.933Neolamprologus_brichardi
ENSRNOG00000033169Cpeb410068.725ENSNBRG00000016474cpeb4a10068.097Neolamprologus_brichardi
ENSRNOG00000033169Cpeb410098.197ENSNLEG00000000487CPEB410098.197Nomascus_leucogenys
ENSRNOG00000033169Cpeb47699.435ENSOPRG00000002868CPEB47699.435Ochotona_princeps
ENSRNOG00000033169Cpeb410099.040ENSODEG00000001934CPEB4100100.000Octodon_degus
ENSRNOG00000033169Cpeb410068.859ENSONIG00000017682cpeb4a10068.231Oreochromis_niloticus
ENSRNOG00000033169Cpeb410096.580ENSOANG00000003990CPEB410096.580Ornithorhynchus_anatinus
ENSRNOG00000033169Cpeb49098.462ENSOCUG00000008971CPEB48498.462Oryctolagus_cuniculus
ENSRNOG00000033169Cpeb410074.108ENSORLG00000001711CPEB410076.267Oryzias_latipes
ENSRNOG00000033169Cpeb410069.681ENSORLG00000007328cpeb4a10087.390Oryzias_latipes
ENSRNOG00000033169Cpeb410069.548ENSORLG00020006738cpeb4a10069.057Oryzias_latipes_hni
ENSRNOG00000033169Cpeb410074.274ENSORLG00020019628CPEB410076.000Oryzias_latipes_hni
ENSRNOG00000033169Cpeb410069.548ENSORLG00015006236cpeb4a10087.390Oryzias_latipes_hsok
ENSRNOG00000033169Cpeb410074.240ENSORLG00015003471CPEB410076.400Oryzias_latipes_hsok
ENSRNOG00000033169Cpeb410069.548ENSOMEG00000011206cpeb4a10087.390Oryzias_melastigma
ENSRNOG00000033169Cpeb410074.637ENSOMEG00000000138CPEB410076.400Oryzias_melastigma
ENSRNOG00000033169Cpeb410098.765ENSOGAG00000004243CPEB410098.765Otolemur_garnettii
ENSRNOG00000033169Cpeb410098.903ENSOARG00000004239CPEB410098.903Ovis_aries
ENSRNOG00000033169Cpeb410098.903ENSPPAG00000030599CPEB410098.903Pan_paniscus
ENSRNOG00000033169Cpeb410099.040ENSPPRG00000001603CPEB4100100.000Panthera_pardus
ENSRNOG00000033169Cpeb410098.903ENSPTIG00000015408CPEB410099.705Panthera_tigris_altaica
ENSRNOG00000033169Cpeb410098.903ENSPTRG00000017545CPEB410098.903Pan_troglodytes
ENSRNOG00000033169Cpeb410098.903ENSPANG00000009300CPEB410098.903Papio_anubis
ENSRNOG00000033169Cpeb410079.019ENSPKIG00000007012cpeb4a10079.019Paramormyrops_kingsleyae
ENSRNOG00000033169Cpeb410080.978ENSPKIG00000009006CPEB410080.978Paramormyrops_kingsleyae
ENSRNOG00000033169Cpeb410093.425ENSPSIG00000009213CPEB410093.425Pelodiscus_sinensis
ENSRNOG00000033169Cpeb410071.850ENSPMGG00000007127CPEB410074.699Periophthalmus_magnuspinnatus
ENSRNOG00000033169Cpeb410095.628ENSPCIG00000015843CPEB410096.175Phascolarctos_cinereus
ENSRNOG00000033169Cpeb410069.907ENSPFOG00000000778cpeb4a10069.241Poecilia_formosa
ENSRNOG00000033169Cpeb410073.236ENSPLAG00000017841CPEB410075.133Poecilia_latipinna
ENSRNOG00000033169Cpeb49668.050ENSPLAG00000017182cpeb4a10088.563Poecilia_latipinna
ENSRNOG00000033169Cpeb410074.301ENSPMEG00000017399CPEB410076.197Poecilia_mexicana
ENSRNOG00000033169Cpeb410070.000ENSPMEG00000003483cpeb4a10088.563Poecilia_mexicana
ENSRNOG00000033169Cpeb410074.308ENSPREG00000006171CPEB410076.184Poecilia_reticulata
ENSRNOG00000033169Cpeb410069.507ENSPREG00000019466cpeb4a10069.108Poecilia_reticulata
ENSRNOG00000033169Cpeb410098.903ENSPPYG00000016058CPEB410098.903Pongo_abelii
ENSRNOG00000033169Cpeb479100.000ENSPCAG00000007021CPEB479100.000Procavia_capensis
ENSRNOG00000033169Cpeb410098.903ENSPCOG00000004676CPEB410098.903Propithecus_coquereli
ENSRNOG00000033169Cpeb410098.628ENSPVAG00000007863CPEB410098.628Pteropus_vampyrus
ENSRNOG00000033169Cpeb410069.437ENSPNYG00000015536CPEB410071.218Pundamilia_nyererei
ENSRNOG00000033169Cpeb47659.686ENSPNYG00000000178cpeb4a9158.885Pundamilia_nyererei
ENSRNOG00000033169Cpeb410079.752ENSPNAG00000027950CPEB410079.752Pygocentrus_nattereri
ENSRNOG00000033169Cpeb410074.297ENSPNAG00000010337cpeb4a10075.234Pygocentrus_nattereri
ENSRNOG00000033169Cpeb410098.903ENSRROG00000029196CPEB410098.903Rhinopithecus_roxellana
ENSRNOG00000033169Cpeb410098.903ENSSBOG00000002632CPEB410098.903Saimiri_boliviensis_boliviensis
ENSRNOG00000033169Cpeb410096.999ENSSHAG00000014932CPEB410096.999Sarcophilus_harrisii
ENSRNOG00000033169Cpeb410082.305ENSSFOG00015017925cpeb410082.305Scleropages_formosus
ENSRNOG00000033169Cpeb410081.868ENSSFOG00015000264CPEB410082.442Scleropages_formosus
ENSRNOG00000033169Cpeb410075.333ENSSMAG00000001696CPEB410076.964Scophthalmus_maximus
ENSRNOG00000033169Cpeb410069.588ENSSMAG00000008812cpeb4a10088.563Scophthalmus_maximus
ENSRNOG00000033169Cpeb410070.159ENSSDUG00000009599cpeb4a10070.464Seriola_dumerili
ENSRNOG00000033169Cpeb410074.567ENSSDUG00000020954CPEB410076.995Seriola_dumerili
ENSRNOG00000033169Cpeb410075.099ENSSLDG00000006601CPEB410076.995Seriola_lalandi_dorsalis
ENSRNOG00000033169Cpeb410096.159ENSSARG00000013389CPEB410096.159Sorex_araneus
ENSRNOG00000033169Cpeb410093.204ENSSPUG00000013161CPEB410093.204Sphenodon_punctatus
ENSRNOG00000033169Cpeb410074.834ENSSPAG00000009565CPEB410076.862Stegastes_partitus
ENSRNOG00000033169Cpeb410069.854ENSSPAG00000008532cpeb4a10070.027Stegastes_partitus
ENSRNOG00000033169Cpeb410098.354ENSSSCG00000016981CPEB410098.354Sus_scrofa
ENSRNOG00000033169Cpeb410092.213ENSTGUG00000000329CPEB410092.077Taeniopygia_guttata
ENSRNOG00000033169Cpeb410070.856ENSTRUG00000010692CPEB410072.230Takifugu_rubripes
ENSRNOG00000033169Cpeb410069.774ENSTRUG00000010947cpeb4a10069.548Takifugu_rubripes
ENSRNOG00000033169Cpeb410069.854ENSTNIG00000017077cpeb4a10069.629Tetraodon_nigroviridis
ENSRNOG00000033169Cpeb410096.433ENSTBEG00000001429CPEB410096.433Tupaia_belangeri
ENSRNOG00000033169Cpeb49098.160ENSUAMG00000014371CPEB49998.160Ursus_americanus
ENSRNOG00000033169Cpeb410090.535ENSVPAG00000010897CPEB410090.535Vicugna_pacos
ENSRNOG00000033169Cpeb410099.040ENSVVUG00000002022CPEB410099.040Vulpes_vulpes
ENSRNOG00000033169Cpeb410073.635ENSXCOG00000006460CPEB410076.064Xiphophorus_couchianus
ENSRNOG00000033169Cpeb410069.137ENSXCOG00000010345cpeb4a10068.329Xiphophorus_couchianus
ENSRNOG00000033169Cpeb410074.177ENSXMAG00000000294CPEB410076.064Xiphophorus_maculatus
ENSRNOG00000033169Cpeb410070.040ENSXMAG00000010247cpeb4a10088.563Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000900translation repressor activity, mRNA regulatory element binding21873635.IBAFunction
GO:0002931response to ischemia-IEAProcess
GO:0002931response to ischemia-ISOProcess
GO:0003723RNA binding-ISOFunction
GO:0003730mRNA 3'-UTR binding21873635.IBAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus20937770.IDAComponent
GO:0005634nucleus-ISOComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005737cytoplasm20937770.IDAComponent
GO:0005737cytoplasm-ISOComponent
GO:0005783endoplasmic reticulum-IEAComponent
GO:0005783endoplasmic reticulum-ISOComponent
GO:0006412translation-IEAProcess
GO:0008135translation factor activity, RNA binding21873635.IBAFunction
GO:0014069postsynaptic density-IEAComponent
GO:0014069postsynaptic density-ISOComponent
GO:0030425dendrite20937770.IDAComponent
GO:0030425dendrite-IEAComponent
GO:0030425dendrite-ISOComponent
GO:0035235ionotropic glutamate receptor signaling pathway20937770.IDAProcess
GO:0036294cellular response to decreased oxygen levels20937770.IDAProcess
GO:0042149cellular response to glucose starvation20937770.IDAProcess
GO:0043005neuron projection21873635.IBAComponent
GO:0043022ribosome binding21873635.IBAFunction
GO:0043524negative regulation of neuron apoptotic process20937770.IMPProcess
GO:0045202synapse21873635.IBAComponent
GO:0045202synapse-ISOComponent
GO:0071230cellular response to amino acid stimulus20937770.IDAProcess
GO:0071230cellular response to amino acid stimulus-IEAProcess
GO:0071230cellular response to amino acid stimulus-ISOProcess
GO:0098794postsynapse17024188.EXPComponent
GO:0098794postsynapse17024188.IDAComponent
GO:1990124messenger ribonucleoprotein complex21873635.IBAComponent
GO:2000766negative regulation of cytoplasmic translation21873635.IBAProcess

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